FFCP PHASE1:Hg19::chr22:39867407..39867414,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:39867407..39867414,- | |||
|coexpression_cluster_id=C690 | |||
|description=CAGE_peak_at_chr22:39867407..39867414,- | |description=CAGE_peak_at_chr22:39867407..39867414,- | ||
|id=chr22:39867407..39867414,- | |id=chr22:39867407..39867414,- | ||
|ontology_enrichment_celltype=CL:1000507!6.27e-12!12;CL:1000494!6.27e-12!12;CL:1000497!4.05e-11!18;CL:0002518!4.05e-11!18;CL:1000449!6.78e-09!16;CL:0000239!6.86e-09!3;CL:1000615!6.86e-09!3;CL:0002306!6.86e-09!3;CL:0002681!2.39e-07!13;CL:0002584!2.39e-07!13;CL:0000313!4.89e-07!1;CL:0002563!6.40e-07!4 | |ontology_enrichment_celltype=CL:1000507!6.27e-12!12;CL:1000494!6.27e-12!12;CL:1000497!4.05e-11!18;CL:0002518!4.05e-11!18;CL:1000449!6.78e-09!16;CL:0000239!6.86e-09!3;CL:1000615!6.86e-09!3;CL:0002306!6.86e-09!3;CL:0002681!2.39e-07!13;CL:0002584!2.39e-07!13;CL:0000313!4.89e-07!1;CL:0002563!6.40e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.72e-26;1 | |||
|ontology_enrichment_disease=DOID:3493!1.64e-12!2;DOID:299!6.46e-08!25;DOID:2152!4.89e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.14e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!9.42e-13!27;UBERON:0003918!9.42e-13!27;UBERON:0005095!9.42e-13!27;UBERON:0007687!9.42e-13!27;UBERON:0009773!6.27e-12!12;UBERON:0001231!6.27e-12!12;UBERON:0004810!6.27e-12!12;UBERON:0000489!1.41e-10!32;UBERON:0000160!6.71e-10!27;UBERON:0005409!1.26e-09!35;UBERON:0006554!2.63e-09!44;UBERON:0001008!4.56e-09!45;UBERON:0005172!6.52e-09!55;UBERON:0005173!6.52e-09!55;UBERON:0004211!6.78e-09!16;UBERON:0001285!6.78e-09!16;UBERON:0007684!6.78e-09!16;UBERON:0003220!6.78e-09!16;UBERON:0004208!6.78e-09!16;UBERON:0006853!6.86e-09!3;UBERON:0007685!6.86e-09!3;UBERON:0004134!6.86e-09!3;UBERON:0006555!2.33e-08!17;UBERON:0005103!2.33e-08!17;UBERON:0000083!2.33e-08!17;UBERON:0009201!2.33e-08!17;UBERON:0004819!2.33e-08!17;UBERON:0006553!2.33e-08!17;UBERON:0003074!2.33e-08!17;UBERON:0003060!2.33e-08!17;UBERON:0000080!7.00e-08!18;UBERON:0002120!7.00e-08!18;UBERON:0004875!7.00e-08!18;UBERON:0005721!7.00e-08!18;UBERON:0005754!7.00e-08!18;UBERON:0007297!7.00e-08!18;UBERON:0002417!7.21e-08!61;UBERON:0000916!7.21e-08!61;UBERON:0002134!2.23e-07!1;UBERON:0005208!2.23e-07!1;UBERON:0005946!2.23e-07!1;UBERON:0005965!2.23e-07!1;UBERON:0002078!2.23e-07!1;UBERON:0001225!2.39e-07!13;UBERON:0008987!2.39e-07!13;UBERON:0004876!4.54e-07!20;UBERON:0004911!4.89e-07!1;UBERON:0001242!6.40e-07!4;UBERON:0001262!6.40e-07!4;UBERON:0004786!6.40e-07!4;UBERON:0004808!6.40e-07!4;UBERON:0001277!6.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;5.44e-45;4!UBERON:0000160;2.09e-22;17!UBERON:0005409;1.17e-17;22!UBERON:0004921;2.47e-10;33!UBERON:0002110;1.47e-09;3!UBERON:0002114;1.47e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.69e-45,4;UBERON:0000160,1.92e-22,17;UBERON:0005409,1.05e-15,25;UBERON:0002110,1.54e-09,3;UBERON:0006242,1.54e-09,3;UBERON:0002114,1.67e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0.424059214301822,0,0,1.68069372556344,0.611030144933625,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02447419488958,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,2.31522474323834,1.96703604453562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0.424059214301822,0,0,1.68069372556344,0.611030144933625,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02447419488958,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,2.31522474323834,1.96703604453562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:39867407..39867414,- | |short_description=p@chr22:39867407..39867414,- | ||
}} | }} |
Latest revision as of 21:25, 28 July 2015
Short description: | p@chr22:39867407..39867414, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:39867407..39867414, - |
Coexpression cluster: | C690_duodenum_small_temporal_gall_colon_Neurons_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 4.69e-45 | 4 |
intestine | 1.92e-22 | 17 |
gastrointestinal system | 1.05e-15 | 25 |
gallbladder | 1.54e-09 | 3 |
gall bladder primordium | 1.54e-09 | 3 |
duodenum | 1.67e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.40e-14 | 2 |