FFCP PHASE1:Hg19::chr17:46691990..46692004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3218 | |EntrezGene=3218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |HGNC=5119 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_AB463751,BC141560_5end | |association_with_transcript=61bp_to_AB463751,BC141560_5end | ||
|cluster_id=chr17:46691990..46692004,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_11_at_HOXB8_5end | |description=CAGE_peak_11_at_HOXB8_5end | ||
|id=chr17:46691990..46692004,- | |id=chr17:46691990..46692004,- | ||
|ontology_enrichment_celltype=CL:0002564!9.98e-08!3;CL:0002615!2.57e-07!3 | |ontology_enrichment_celltype=CL:0002564!9.98e-08!3;CL:0002615!2.57e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002564;1.28e-13;3!CL:0002553;2.53e-11;1!CL:0000167;3.76e-11;1!CL:0000164;3.76e-11;1!CL:0000502;3.76e-11;1!CL:0000172;3.76e-11;1!CL:0000173;3.76e-11;1!CL:0002188;1.37e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.24e-13,3;CL:0002553,2.53e-11,1;CL:0000167,3.76e-11,1;CL:0000164,3.76e-11,1;CL:0000502,3.76e-11,1;CL:0000172,3.76e-11,1;CL:0000173,3.76e-11,1;CL:0002351,3.76e-11,1;CL:0002188,1.32e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.42e-14;3!UBERON:0003057;4.42e-14;3!CL:0002351;3.76e-11;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.96e-08!143;DOID:3119!4.55e-07!14;DOID:305!6.91e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.96e-08!143;DOID:3119!4.55e-07!14;DOID:305!6.91e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4430;3.76e-11;1!DOID:3111;5.30e-11;1!DOID:3603;5.30e-11;1!DOID:6193;1.10e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.76e-11,1;DOID:3111,4.58e-11,1;DOID:3603,4.58e-11,1;DOID:6193,1.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.38e-08!6;UBERON:0002358!1.38e-08!6;UBERON:0003684!1.38e-08!6;UBERON:0001178!1.38e-08!6;UBERON:0000489!1.51e-08!32;UBERON:0005174!6.14e-08!5;UBERON:0001137!6.14e-08!5;UBERON:0002242!9.98e-08!3;UBERON:0003068!9.98e-08!3;UBERON:0002328!9.98e-08!3;UBERON:0004880!9.98e-08!3;UBERON:0002417!1.15e-07!61;UBERON:0000916!1.15e-07!61;UBERON:0003586!1.23e-07!5;UBERON:0004457!1.32e-07!12;UBERON:0000042!1.32e-07!12;UBERON:0001737!1.38e-07!9 | |ontology_enrichment_uberon=UBERON:0003688!1.38e-08!6;UBERON:0002358!1.38e-08!6;UBERON:0003684!1.38e-08!6;UBERON:0001178!1.38e-08!6;UBERON:0000489!1.51e-08!32;UBERON:0005174!6.14e-08!5;UBERON:0001137!6.14e-08!5;UBERON:0002242!9.98e-08!3;UBERON:0003068!9.98e-08!3;UBERON:0002328!9.98e-08!3;UBERON:0004880!9.98e-08!3;UBERON:0002417!1.15e-07!61;UBERON:0000916!1.15e-07!61;UBERON:0003586!1.23e-07!5;UBERON:0004457!1.32e-07!12;UBERON:0000042!1.32e-07!12;UBERON:0001737!1.38e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;4.42e-14;3!UBERON:0005174;4.42e-14;3!UBERON:0001137;4.42e-14;3!UBERON:0002242;1.28e-13;3!UBERON:0011135;1.57e-08;5!UBERON:0002216;1.57e-08;5!UBERON:0011134;1.57e-08;5!UBERON:0002209;1.57e-08;5!UBERON:0002213;1.57e-08;5!UBERON:0007844;1.57e-08;5!UBERON:0011138;1.57e-08;5!UBERON:0001130;1.57e-08;5!UBERON:0001066;1.57e-08;5!UBERON:0001468;1.57e-08;5!UBERON:0000489;3.57e-08;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.15e-14,3;UBERON:0005174,4.15e-14,3;UBERON:0001137,4.15e-14,3;UBERON:0002242,1.24e-13,3;UBERON:0003068,1.24e-13,3;UBERON:0002328,1.24e-13,3;UBERON:0004880,1.24e-13,3;UBERON:0011135,1.54e-08,5;UBERON:0002216,1.54e-08,5;UBERON:0011134,1.54e-08,5;UBERON:0002209,1.54e-08,5;UBERON:0002213,1.54e-08,5;UBERON:0005856,1.54e-08,5;UBERON:0005866,1.54e-08,5;UBERON:0005863,1.54e-08,5;UBERON:0007844,1.54e-08,5;UBERON:0011138,1.54e-08,5;UBERON:0001130,1.54e-08,5;UBERON:0001066,1.54e-08,5;UBERON:0001468,1.54e-08,5;UBERON:0000489,1.13e-07,31 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,2.28081631715554,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.50085260529839,1.35632511849868,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.348631135379878,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,1.56869953835371,0,0,0,1.36074964221213,0.215915916102139,3.08454505380579,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39858678932185,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0.789168805698781,0,0,0,0,0,0,0.330991955875499,0,0,0.853828638089378,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0.288180834308212,2.06165873098648,1.88754497648161,0,0,0.235694034616795,1.22313785466253,1.35983700206033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869349641179368,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,12.008561224282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0.697448552208751,0.173858272302579,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0.31020638566432,0,0,0.196300467230486,0,0,0,0,0,0,0.397901550322736,0,0,0,1.05673990496671,0.0771741581079447,0,0.940634592723046,0,3.77082475362602,4.90771167787363,0,3.8039015482506,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.946629373159108,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,2.28081631715554,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.50085260529839,1.35632511849868,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.348631135379878,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,1.56869953835371,0,0,0,1.36074964221213,0.215915916102139,3.08454505380579,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39858678932185,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0.789168805698781,0,0,0,0,0,0,0.330991955875499,0,0,0.853828638089378,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0.288180834308212,2.06165873098648,1.88754497648161,0,0,0.235694034616795,1.22313785466253,1.35983700206033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869349641179368,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,12.008561224282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0.697448552208751,0.173858272302579,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0.31020638566432,0,0,0.196300467230486,0,0,0,0,0,0,0.397901550322736,0,0,0,1.05673990496671,0.0771741581079447,0,0.940634592723046,0,3.77082475362602,4.90771167787363,0,3.8039015482506,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.946629373159108,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p11@HOXB8 | |short_description=p11@HOXB8 | ||
}} | }} |
Latest revision as of 07:33, 25 September 2015
Short description: | p11@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HOXB8_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 61bp_to_AB463751, BC141560_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.24e-13 | 3 |
lung fibroblast | 2.53e-11 | 1 |
peptide hormone secreting cell | 3.76e-11 | 1 |
enteroendocrine cell | 3.76e-11 | 1 |
type D enteroendocrine cell | 3.76e-11 | 1 |
somatostatin secreting cell | 3.76e-11 | 1 |
pancreatic D cell | 3.76e-11 | 1 |
progenitor cell of endocrine pancreas | 3.76e-11 | 1 |
glomerular endothelial cell | 1.32e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.15e-14 | 3 |
dorsal region element | 4.15e-14 | 3 |
dorsum | 4.15e-14 | 3 |
nucleus pulposus | 1.24e-13 | 3 |
axial mesoderm | 1.24e-13 | 3 |
notochord | 1.24e-13 | 3 |
chordamesoderm | 1.24e-13 | 3 |
intervertebral cartilage | 1.54e-08 | 5 |
symphysis | 1.54e-08 | 5 |
nonsynovial joint | 1.54e-08 | 5 |
fibrous joint | 1.54e-08 | 5 |
cartilaginous joint | 1.54e-08 | 5 |
developing mesenchymal condensation | 1.54e-08 | 5 |
pre-cartilage condensation | 1.54e-08 | 5 |
cartilaginous condensation | 1.54e-08 | 5 |
cartilage element | 1.54e-08 | 5 |
post-cranial axial skeletal system | 1.54e-08 | 5 |
vertebral column | 1.54e-08 | 5 |
intervertebral disk | 1.54e-08 | 5 |
intervertebral joint | 1.54e-08 | 5 |
cavitated compound organ | 1.13e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.76e-11 | 1 |
cystadenocarcinoma | 4.58e-11 | 1 |
mucinous cystadenocarcinoma | 4.58e-11 | 1 |
epithelioid sarcoma | 1.33e-10 | 1 |