FFCP PHASE1:Hg19::chr17:46667628..46667642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3213 | |EntrezGene=3213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5114 | |HGNC=5114 | ||
|TSSclassifier=strong | |||
|UniProt=P14651 | |UniProt=P14651 | ||
|association_with_transcript=0bp_to_ENST00000498678,uc010dbf.2,uc010dbg.2,uc010wlm.1_5end | |association_with_transcript=0bp_to_ENST00000498678,uc010dbf.2,uc010dbg.2,uc010wlm.1_5end | ||
|cluster_id=chr17:46667628..46667642,- | |||
|coexpression_cluster_id=C2414 | |||
|description=CAGE_peak_2_at_HOXB3_5end | |description=CAGE_peak_2_at_HOXB3_5end | ||
|id=chr17:46667628..46667642,- | |id=chr17:46667628..46667642,- | ||
|ontology_enrichment_celltype=CL:1000449!5.57e-16!16;CL:1000507!4.56e-15!12;CL:1000494!4.56e-15!12;CL:1000497!1.12e-13!18;CL:0002518!1.12e-13!18;CL:0002681!3.30e-12!13;CL:0002584!3.30e-12!13;CL:0002334!3.61e-07!12 | |ontology_enrichment_celltype=CL:1000449!5.57e-16!16;CL:1000507!4.56e-15!12;CL:1000494!4.56e-15!12;CL:1000497!1.12e-13!18;CL:0002518!1.12e-13!18;CL:0002681!3.30e-12!13;CL:0002584!3.30e-12!13;CL:0002334!3.61e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.06e-16;10!CL:1000494;1.06e-16;10!CL:1000449;8.42e-13;15!CL:1000497;4.97e-11;17!CL:0002518;4.97e-11;17!CL:0002681;8.46e-08;12!CL:0002584;8.46e-08;12!CL:0002579;2.15e-07;3!CL:0000239;3.21e-07;3!CL:1000615;3.21e-07;3!CL:0002306;3.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.79e-17,10;CL:1000494,7.79e-17,10;CL:1000449,8.10e-13,15;CL:1000497,4.81e-11,17;CL:0002518,4.81e-11,17;CL:0002681,8.85e-08,12;CL:0002584,8.85e-08,12;CL:0002579,2.04e-07,3;CL:0000239,2.33e-07,3;CL:1000615,2.33e-07,3;CL:0002306,2.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.35e-19!21;UBERON:0000080!9.89e-19!18;UBERON:0002120!9.89e-19!18;UBERON:0004875!9.89e-19!18;UBERON:0005721!9.89e-19!18;UBERON:0005754!9.89e-19!18;UBERON:0007297!9.89e-19!18;UBERON:0002113!7.22e-18!27;UBERON:0003918!7.22e-18!27;UBERON:0005095!7.22e-18!27;UBERON:0007687!7.22e-18!27;UBERON:0006555!2.43e-17!17;UBERON:0005103!2.43e-17!17;UBERON:0000083!2.43e-17!17;UBERON:0009201!2.43e-17!17;UBERON:0004819!2.43e-17!17;UBERON:0006553!2.43e-17!17;UBERON:0003074!2.43e-17!17;UBERON:0003060!2.43e-17!17;UBERON:0002417!5.21e-17!61;UBERON:0000916!5.21e-17!61;UBERON:0000489!9.01e-17!32;UBERON:0004876!2.74e-16!20;UBERON:0004211!5.57e-16!16;UBERON:0001285!5.57e-16!16;UBERON:0007684!5.57e-16!16;UBERON:0003220!5.57e-16!16;UBERON:0004208!5.57e-16!16;UBERON:0009569!1.46e-15!113;UBERON:0001008!2.67e-15!45;UBERON:0009773!4.56e-15!12;UBERON:0001231!4.56e-15!12;UBERON:0004810!4.56e-15!12;UBERON:0002100!5.65e-15!216;UBERON:0000058!5.92e-15!26;UBERON:0006554!1.37e-14!44;UBERON:0005177!1.01e-12!107;UBERON:0003064!1.42e-12!37;UBERON:0005172!2.77e-12!55;UBERON:0005173!2.77e-12!55;UBERON:0001225!3.30e-12!13;UBERON:0008987!3.30e-12!13;UBERON:0003886!4.31e-12!63;UBERON:0000464!9.92e-12!104;UBERON:0003104!2.21e-10!238;UBERON:0009142!2.21e-10!238;UBERON:0000353!4.23e-10!17;UBERON:0002553!5.84e-10!70;UBERON:0000466!6.05e-10!126;UBERON:0005256!8.35e-10!143;UBERON:0001851!2.70e-09!16;UBERON:0003688!4.40e-08!6;UBERON:0002358!4.40e-08!6;UBERON:0003684!4.40e-08!6;UBERON:0001178!4.40e-08!6;UBERON:0000059!5.67e-08!11;UBERON:0004457!7.25e-08!12;UBERON:0000042!7.25e-08!12;UBERON:0004175!7.83e-08!25;UBERON:0005409!1.25e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.06e-16;10!UBERON:0009773;1.06e-16;10!UBERON:0001231;1.06e-16;10!UBERON:0004810;1.06e-16;10!UBERON:0002113;7.65e-15;24!UBERON:0011143;7.65e-15;24!UBERON:0006555;8.42e-13;15!UBERON:0004819;8.42e-13;15!UBERON:0001285;8.42e-13;15!UBERON:0007684;8.42e-13;15!UBERON:0000489;1.16e-11;29!UBERON:0006554;3.74e-11;30!UBERON:0001008;3.74e-11;30!UBERON:0004175;4.24e-09;21!UBERON:0003688;6.00e-09;6!UBERON:0002358;6.00e-09;6!UBERON:0003684;6.00e-09;6!UBERON:0001178;6.00e-09;6!UBERON:0006947;1.42e-08;3!UBERON:0004054;1.42e-08;3!UBERON:0004457;5.17e-08;9!UBERON:0000042;5.17e-08;9!UBERON:0001225;8.46e-08;12!UBERON:0008987;8.46e-08;12!UBERON:0006853;3.21e-07;3!UBERON:0007685;3.21e-07;3!UBERON:0004134;3.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.98e-18,26;UBERON:0003918,1.98e-18,26;UBERON:0011143,1.98e-18,26;UBERON:0005095,1.98e-18,26;UBERON:0007687,1.98e-18,26;UBERON:0004810,7.79e-17,10;UBERON:0000489,9.64e-15,31;UBERON:0006555,1.04e-14,16;UBERON:0004819,1.04e-14,16;UBERON:0004211,8.10e-13,15;UBERON:0009773,8.10e-13,15;UBERON:0001231,8.10e-13,15;UBERON:0001285,8.10e-13,15;UBERON:0007684,8.10e-13,15;UBERON:0004208,8.10e-13,15;UBERON:0009569,2.24e-12,112;UBERON:0002417,4.27e-12,60;UBERON:0000916,4.27e-12,60;UBERON:0006554,1.03e-10,47;UBERON:0001008,2.15e-10,48;UBERON:0005177,1.25e-09,101;UBERON:0003688,7.96e-09,6;UBERON:0002358,7.96e-09,6;UBERON:0003684,7.96e-09,6;UBERON:0001178,7.96e-09,6;UBERON:0004175,7.96e-09,25;UBERON:0002100,8.41e-09,199;UBERON:0006947,1.46e-08,3;UBERON:0004054,1.46e-08,3;UBERON:0004457,6.65e-08,12;UBERON:0000042,6.65e-08,12;UBERON:0005172,8.25e-08,54;UBERON:0005173,8.25e-08,54;UBERON:0001225,8.85e-08,12;UBERON:0008987,8.85e-08,12;UBERON:0006853,2.33e-07,3;UBERON:0007685,2.33e-07,3;UBERON:0004134,2.33e-07,3;UBERON:0003104,8.09e-07,160;UBERON:0009142,8.09e-07,160 | |||
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| ||
|short_description=p2@HOXB3 | |short_description=p2@HOXB3 | ||
}} | }} |
Latest revision as of 07:05, 25 September 2015
Short description: | p2@HOXB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB3_5end |
Coexpression cluster: | C2414_kidney_smallcell_seminal_somatostatinoma_ductus_small_Fibroblast |
Association with transcript: | 0bp_to_ENST00000498678, uc010dbf.2, uc010dbg.2, uc010wlm.1_5end |
EntrezGene: | HOXB3 |
HGNC: | 5114 |
UniProt: | P14651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.79e-17 | 10 |
nephron tubule epithelial cell | 7.79e-17 | 10 |
epithelial cell of nephron | 8.10e-13 | 15 |
kidney cell | 4.81e-11 | 17 |
kidney epithelial cell | 4.81e-11 | 17 |
kidney cortical cell | 8.85e-08 | 12 |
renal cortical epithelial cell | 8.85e-08 | 12 |
omentum preadipocyte | 2.04e-07 | 3 |
brush border epithelial cell | 2.33e-07 | 3 |
kidney cortex tubule cell | 2.33e-07 | 3 |
epithelial cell of proximal tubule | 2.33e-07 | 3 |