FFCP PHASE1:Hg19::chr11:64825999..64826030,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10004 | |EntrezGene=10004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23536 | |HGNC=23536 | ||
|TSSclassifier=strong | |||
|UniProt=C9JX16,Q9UQQ1,F8WBQ9 | |UniProt=C9JX16,Q9UQQ1,F8WBQ9 | ||
|association_with_transcript=0bp_to_ENST00000339885,ENST00000355369,ENST00000358658,ENST00000453486,ENST00000528977,ENST00000529274,NM_005468,uc001ocn.2,uc010rnw.1_5end | |||
|cluster_id=chr11:64825999..64826030,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_NAALADL1_5end | |||
|id=chr11:64825999..64826030,- | |||
|ontology_enrichment_celltype=CL:0000181!5.38e-09!12;CL:0000417!5.38e-09!12;CL:0000668!5.38e-09!12;CL:0000414!5.38e-09!12;CL:0000412!5.38e-09!12;CL:0000182!5.38e-09!12;CL:0002535!5.41e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.19e-12;12!CL:0002535;4.34e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.19e-12,12;CL:0002535,4.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.79e-13;11!UBERON:0009497;3.21e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.37e-31!27;UBERON:0005409!2.54e-29!35;UBERON:0000059!3.76e-25!11;UBERON:0001155!5.25e-20!9;UBERON:0004921!9.97e-15!129;UBERON:0004185!9.97e-15!129;UBERON:0001154!4.31e-12!1;UBERON:0001153!4.31e-12!1;UBERON:0001007!6.10e-12!155;UBERON:0001555!6.10e-12!155;UBERON:0007026!6.10e-12!155;UBERON:0004119!8.62e-11!169;UBERON:0000925!8.62e-11!169;UBERON:0006595!8.62e-11!169;UBERON:0004907!1.06e-09!5;UBERON:0009854!5.91e-08!23;UBERON:0002108!3.08e-07!14;UBERON:0009856!4.69e-07!26;UBERON:0006955!5.41e-07!2;UBERON:0004801!5.41e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.15e-41;17!UBERON:0005409;6.15e-32;22!UBERON:0000059;1.73e-22;11!UBERON:0004921;5.52e-20;33!UBERON:0001155;5.86e-16;9!UBERON:0002108;2.68e-13;4!UBERON:0001007;1.21e-09;81!UBERON:0006955;4.34e-09;2!UBERON:0004801;4.34e-09;2!UBERON:0001555;2.35e-08;54!UBERON:0002107;7.45e-08;19!UBERON:0006925;7.45e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.15e-41,17;UBERON:0005409,3.19e-28,25;UBERON:0000059,1.59e-22,11;UBERON:0001155,5.72e-16,9;UBERON:0002108,2.85e-13,4;UBERON:0004921,6.65e-12,118;UBERON:0001007,1.61e-09,145;UBERON:0001555,1.61e-09,145;UBERON:0007026,1.61e-09,145;UBERON:0006955,4.34e-09,2;UBERON:0004801,4.34e-09,2;UBERON:0004119,1.54e-08,160;UBERON:0000925,1.54e-08,160;UBERON:0006595,1.54e-08,160;UBERON:0002107,7.45e-08,19;UBERON:0006925,7.45e-08,19;UBERON:0008836,7.45e-08,19;UBERON:0011216,4.61e-07,223;UBERON:0008835,7.47e-07,22;UBERON:0003894,7.47e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,16.8794941062365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,71.5621696832014,11.6095727537389,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3310947840584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6482077561262,3.46146605200899,4.11161617510528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.197231955077,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,16.8794941062365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,71.5621696832014,11.6095727537389,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3310947840584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6482077561262,3.46146605200899,4.11161617510528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.197231955077,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NAALADL1 | |||
}} | }} |
Latest revision as of 06:07, 19 September 2015
Short description: | p2@NAALADL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAALADL1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000339885, ENST00000355369, ENST00000358658, ENST00000453486, ENST00000528977, ENST00000529274, NM_005468, uc001ocn.2, uc010rnw.1_5end |
EntrezGene: | NAALADL1 |
HGNC: | 23536 |
UniProt: | C9JX16Q9UQQ1F8WBQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.19e-12 | 12 |
epithelial cell of cervix | 4.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.15e-41 | 17 |
gastrointestinal system | 3.19e-28 | 25 |
large intestine | 1.59e-22 | 11 |
colon | 5.72e-16 | 9 |
small intestine | 2.85e-13 | 4 |
subdivision of digestive tract | 6.65e-12 | 118 |
digestive system | 1.61e-09 | 145 |
digestive tract | 1.61e-09 | 145 |
primitive gut | 1.61e-09 | 145 |
uterine epithelium | 4.34e-09 | 2 |
cervix epithelium | 4.34e-09 | 2 |
endoderm-derived structure | 1.54e-08 | 160 |
endoderm | 1.54e-08 | 160 |
presumptive endoderm | 1.54e-08 | 160 |
liver | 7.45e-08 | 19 |
digestive gland | 7.45e-08 | 19 |
liver bud | 7.45e-08 | 19 |
organ system subdivision | 4.61e-07 | 223 |
hepatic diverticulum | 7.47e-07 | 22 |
liver primordium | 7.47e-07 | 22 |