FFCP PHASE1:Hg19::chr17:42992860..42992875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIR1 | |UniProt=B4DIR1 | ||
|association_with_transcript=0bp_to_ENST00000376990_5end | |association_with_transcript=0bp_to_ENST00000376990_5end | ||
|cluster_id=chr17:42992860..42992875,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_GFAP_5end | |description=CAGE_peak_1_at_GFAP_5end | ||
|id=chr17:42992860..42992875,- | |id=chr17:42992860..42992875,- | ||
|ontology_enrichment_celltype=CL:0000128!4.57e-08!7;CL:0000126!4.57e-08!7;CL:0000127!4.57e-08!7;CL:0002453!4.57e-08!7 | |ontology_enrichment_celltype=CL:0000128!4.57e-08!7;CL:0000126!4.57e-08!7;CL:0000127!4.57e-08!7;CL:0002453!4.57e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.35e-10;7!CL:0000126;1.35e-10;7!CL:0000127;1.35e-10;7!CL:0002605;1.23e-07;3!CL:0002319;4.08e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.34e-10,7;CL:0000126,1.34e-10,7;CL:0000127,1.34e-10,7;CL:0002453,1.34e-10,7;CL:0002605,1.23e-07,3;CL:0002319,4.06e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-20;82!UBERON:0006241;3.30e-08;3!UBERON:0003057;3.30e-08;3!UBERON:0006215;4.71e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;8.45e-58;53!UBERON:0002616;8.45e-58;53!UBERON:0001893;1.45e-55;34!UBERON:0002780;2.38e-55;41!UBERON:0001890;2.38e-55;41!UBERON:0003528;2.77e-55;34!UBERON:0002020;2.77e-55;34!UBERON:0002791;1.47e-54;32!UBERON:0001869;2.58e-54;32!UBERON:0000956;2.35e-46;25!UBERON:0000203;2.35e-46;25!UBERON:0002619;2.76e-40;22!UBERON:0000955;5.94e-38;68!UBERON:0001017;1.95e-36;75!UBERON:0001950;3.24e-36;20!UBERON:0001016;3.91e-32;83!UBERON:0004732;9.44e-27;13!UBERON:0004733;1.15e-24;12!UBERON:0002028;1.15e-24;12!UBERON:0000125;1.20e-19;9!UBERON:0002308;1.20e-19;9!UBERON:0002420;3.51e-19;9!UBERON:0007245;3.51e-19;9!UBERON:0010009;3.51e-19;9!UBERON:0010011;3.51e-19;9!UBERON:0000454;3.51e-19;9!UBERON:0002680;3.21e-18;9!UBERON:0001895;3.21e-18;9!UBERON:0007023;7.59e-17;114!UBERON:0009663;2.28e-15;7!UBERON:0002298;1.82e-14;6!UBERON:0001894;2.43e-14;7!UBERON:0000200;8.83e-13;6!UBERON:0002037;5.97e-12;6!UBERON:0000349;2.22e-11;5!UBERON:0001871;9.12e-11;6!UBERON:0001872;9.26e-11;5!UBERON:0011216;9.86e-11;132!UBERON:0002021;1.03e-10;5!UBERON:0000369;3.24e-09;4!UBERON:0002435;3.24e-09;4!UBERON:0000204;3.24e-09;4!UBERON:0002784;3.92e-09;4!UBERON:0010314;5.06e-09;132!UBERON:0002240;3.30e-08;3!UBERON:0005174;3.30e-08;3!UBERON:0001137;3.30e-08;3!UBERON:0003296;3.61e-08;4!UBERON:0010133;3.61e-08;4!UBERON:0001896;3.78e-08;3!UBERON:0005290;3.78e-08;3!UBERON:0000988;5.42e-08;3!UBERON:0005383;2.35e-07;3!UBERON:0005382;2.35e-07;3!UBERON:0001870;3.37e-07;3 | |||
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|short_description=p1@GFAP | |short_description=p1@GFAP | ||
}} | }} |
Latest revision as of 00:00, 25 September 2015
Short description: | p1@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000376990_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | B4DIR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.34e-10 | 7 |
macroglial cell | 1.34e-10 | 7 |
astrocyte | 1.34e-10 | 7 |
oligodendrocyte precursor cell | 1.34e-10 | 7 |
astrocyte of the cerebral cortex | 1.23e-07 | 3 |
neural cell | 4.06e-07 | 25 |