FFCP PHASE1:Hg19::chr11:64974052..64974074,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:64974052..64974074,+
|short_description=p15@CAPN1
|description=CAGE_peak_15_at_CAPN1_5end
|association_with_transcript=324bp_to_ENST00000525013_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=823 | |EntrezGene=823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |HGNC=1476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=324bp_to_ENST00000525013_5end | |||
|cluster_id=chr11:64974052..64974074,+ | |||
|description=CAGE_peak_15_at_CAPN1_5end | |||
|id=chr11:64974052..64974074,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000413;2.47e-11;9!CL:1000746;8.72e-09;7!CL:1000612;8.72e-09;7!CL:0000071;1.60e-08;18!CL:0000115;9.04e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,1.29e-11,9;CL:1000746,1.06e-08,7;CL:1000612,1.06e-08,7;CL:0000071,1.08e-08,18;CL:0002546,1.08e-08,18;CL:0000115,6.83e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-08;18!UBERON:0009143;4.26e-08;1!UBERON:0008801;1.34e-07;1!UBERON:0010226;1.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.60e-09!42;UBERON:0003509!8.60e-09!42;UBERON:0004572!8.60e-09!42;UBERON:0000468!1.43e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;2.47e-11;9!UBERON:0004700;2.47e-11;9!UBERON:0001917;2.47e-11;9!UBERON:0000074;8.72e-09;7!UBERON:0001229;8.72e-09;7!UBERON:0004638;1.60e-08;18!UBERON:0001986;1.60e-08;18!UBERON:0004852;1.60e-08;18!UBERON:0002084;1.34e-07;1!UBERON:0001831;1.34e-07;1!UBERON:0002082;1.34e-07;1!UBERON:0001567;1.34e-07;1!UBERON:0000487;6.28e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.29e-11,9;UBERON:0004700,1.29e-11,9;UBERON:0001917,1.29e-11,9;UBERON:0010532,1.06e-08,7;UBERON:0000074,1.06e-08,7;UBERON:0001229,1.06e-08,7;UBERON:0001230,1.06e-08,7;UBERON:0003220,1.06e-08,7;UBERON:0005749,1.06e-08,7;UBERON:0004199,1.06e-08,7;UBERON:0004209,1.06e-08,7;UBERON:0004198,1.06e-08,7;UBERON:0004638,1.08e-08,18;UBERON:0001986,1.08e-08,18;UBERON:0004852,1.08e-08,18;UBERON:0002084,5.58e-08,1;UBERON:0002082,5.58e-08,1;UBERON:0010226,5.58e-08,1;UBERON:0005103,1.14e-07,8;UBERON:0000083,1.14e-07,8;UBERON:0009201,1.14e-07,8;UBERON:0006553,1.14e-07,8;UBERON:0003074,1.14e-07,8;UBERON:0003060,1.14e-07,8;UBERON:0001831,2.31e-07,1;UBERON:0001567,2.31e-07,1;UBERON:0008801,2.31e-07,1;UBERON:0000487,4.56e-07,22;UBERON:0000080,7.28e-07,9;UBERON:0002120,7.28e-07,9;UBERON:0004875,7.28e-07,9;UBERON:0005721,7.28e-07,9;UBERON:0005754,7.28e-07,9;UBERON:0007297,7.28e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,2.79120467188971,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0,1.83884244895785,0.90361775633475,0,0,0,0.293600439334847,0,0,0,0.671746422719773,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.384273959177026,0.130059347559878,0.164437904603676,1.10540007114339,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0.728590576585084,1.11235332835329,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,1.72046919021225,0.694281003215189,0,1.25849830862972,1.37559020970034,0.417989933073621,0,0,0,0,0,1.22031028774085,0,1.62028389576352,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0.12663051166458,0,0.860509862246441,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0,0.302714855289863,0,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0,0,0,0.408308342509787,0.245668634623536,0,1.18800285728205,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0.919463387397059,0.150238058906597,0.340296549480063,0,0.213557388818567,0.635795703478686,0,0,0.257640540045629,0.744467425326359,0.337552664482532,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0.573609190778008,0,0,0.232387885739037,0.207322110030741,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0.674338760312407,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.98110732562673,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.804231779293047,0.277765335475589,0,0,0,0,0,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.567100388969546,0.0895585227028483,0.290633938513962,1.15014803749563,0.985326475791887,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0.901029173531752,0,0,0,0.22001485746285,0,0,0,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,0.120859449591622,0.802025881213139,0.368323955743585,0.114814448164607,0.546273504020151,0,0,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0,1.00337954770971,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0.512900250232778,0.328014645699706,0,0,0,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0,0,0.10115778085555,0.464845549297286,0,0.6970372701606,1.84820148105653,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0.318203247925937,1.56989728039846,0.359744915166629,0,0.706874414074119,0.202182481573316,0,0.421258456238981,0.48763373908959,0.974853958525138,0,0,0.565621727814851,0,0.551365343546124,0.66343897524122,0.438450885253763,1.15755106853338,0,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0,0.7133421029625,0,0.211107635297664,0,0,0,0.769776901804097,0.670302275535787,1.08890984861323,0.188287601553558,0.43050537267123,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0.846694330895531,0.324621940274555,0.561594356226918,0,0,2.50634477090067,0.677167111206413,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0.0898683511473268,0,0,0.789147245095469,0,0,0,0.371072392647405,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0.0897576444097721,0,0,0.366390373607449,1.06606955203727,0,0,0.332423363800313,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0.442287822516696,0,0,0.123563938946503,0.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| ||
|short_description=p15@CAPN1 | |||
}} | }} |
Latest revision as of 06:53, 19 September 2015
Short description: | p15@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 324bp_to_ENST00000525013_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 1.29e-11 | 9 |
glomerular cell | 1.06e-08 | 7 |
kidney corpuscule cell | 1.06e-08 | 7 |
blood vessel endothelial cell | 1.08e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.08e-08 | 18 |
endothelial cell | 6.83e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.29e-11 | 9 |
arterial system endothelium | 1.29e-11 | 9 |
endothelium of artery | 1.29e-11 | 9 |
primitive nephron | 1.06e-08 | 7 |
renal glomerulus | 1.06e-08 | 7 |
renal corpuscle | 1.06e-08 | 7 |
glomerular capsule | 1.06e-08 | 7 |
metanephric mesenchyme | 1.06e-08 | 7 |
glomerular tuft | 1.06e-08 | 7 |
S-shaped body | 1.06e-08 | 7 |
renal vesicle | 1.06e-08 | 7 |
comma-shaped body | 1.06e-08 | 7 |
blood vessel endothelium | 1.08e-08 | 18 |
endothelium | 1.08e-08 | 18 |
cardiovascular system endothelium | 1.08e-08 | 18 |
heart left ventricle | 5.58e-08 | 1 |
cardiac ventricle | 5.58e-08 | 1 |
future cardiac ventricle | 5.58e-08 | 1 |
mesonephric epithelium | 1.14e-07 | 8 |
mesonephric tubule | 1.14e-07 | 8 |
nephric duct | 1.14e-07 | 8 |
renal duct | 1.14e-07 | 8 |
mesonephric duct | 1.14e-07 | 8 |
pronephric duct | 1.14e-07 | 8 |
parotid gland | 2.31e-07 | 1 |
cheek | 2.31e-07 | 1 |
parotid gland primordium | 2.31e-07 | 1 |
simple squamous epithelium | 4.56e-07 | 22 |
mesonephros | 7.28e-07 | 9 |
pronephros | 7.28e-07 | 9 |
nephrogenic cord | 7.28e-07 | 9 |
pronephric mesoderm | 7.28e-07 | 9 |
rostral part of nephrogenic cord | 7.28e-07 | 9 |
presumptive pronephric mesoderm | 7.28e-07 | 9 |