FFCP PHASE1:Hg19::chr1:61542891..61542920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4774 | |EntrezGene=4774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7784 | |HGNC=7784 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0R0,B4DRJ3,Q12857 | |UniProt=F5H0R0,B4DRJ3,Q12857 | ||
|association_with_transcript=-25bp_to_ENST00000407417,NM_001145511,uc001czy.2_5end | |association_with_transcript=-25bp_to_ENST00000407417,NM_001145511,uc001czy.2_5end | ||
|cluster_id=chr1:61542891..61542920,+ | |||
|coexpression_cluster_id=C3989 | |||
|description=CAGE_peak_12_at_NFIA_5end | |description=CAGE_peak_12_at_NFIA_5end | ||
|id=chr1:61542891..61542920,+ | |id=chr1:61542891..61542920,+ | ||
|ontology_enrichment_celltype=CL:0000791!9.17e-09!18;CL:0000789!9.17e-09!18;CL:0002420!9.17e-09!18;CL:0002419!9.17e-09!18;CL:0000790!9.17e-09!18;CL:0000625!8.04e-08!11;CL:0000084!2.90e-07!25;CL:0000827!2.90e-07!25 | |ontology_enrichment_celltype=CL:0000791!9.17e-09!18;CL:0000789!9.17e-09!18;CL:0002420!9.17e-09!18;CL:0002419!9.17e-09!18;CL:0000790!9.17e-09!18;CL:0000625!8.04e-08!11;CL:0000084!2.90e-07!25;CL:0000827!2.90e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.80e-12;11!CL:0000084;8.71e-09;25!CL:0000791;1.04e-08;18!CL:0000789;1.04e-08;18!CL:0002419;1.04e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.24e-12,11;CL:0000791,1.07e-08,18;CL:0000789,1.07e-08,18;CL:0002420,1.07e-08,18;CL:0002419,1.07e-08,18;CL:0000790,1.07e-08,18;CL:0000084,1.14e-08,25;CL:0000827,1.14e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.92e-15;82!CL:0000790;1.04e-08;18!UBERON:0006241;6.50e-08;3!UBERON:0003057;6.50e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-46!115;UBERON:0001049!1.15e-27!57;UBERON:0005068!1.15e-27!57;UBERON:0006241!1.15e-27!57;UBERON:0007135!1.15e-27!57;UBERON:0002616!1.41e-23!59;UBERON:0002780!7.37e-22!41;UBERON:0001890!7.37e-22!41;UBERON:0006240!7.37e-22!41;UBERON:0000073!1.87e-21!94;UBERON:0001016!1.87e-21!94;UBERON:0001017!2.63e-21!82;UBERON:0005743!4.98e-21!86;UBERON:0003080!6.43e-21!42;UBERON:0003075!2.73e-20!86;UBERON:0007284!2.73e-20!86;UBERON:0000955!2.87e-20!69;UBERON:0006238!2.87e-20!69;UBERON:0002346!1.72e-19!90;UBERON:0001893!1.44e-16!34;UBERON:0002020!1.46e-16!34;UBERON:0003528!1.46e-16!34;UBERON:0002791!7.80e-16!33;UBERON:0001869!4.27e-15!32;UBERON:0003056!6.46e-15!61;UBERON:0000153!2.34e-12!129;UBERON:0007811!2.34e-12!129;UBERON:0000956!1.53e-10!25;UBERON:0000203!1.53e-10!25;UBERON:0000033!1.98e-10!123;UBERON:0002619!3.79e-10!22;UBERON:0004121!6.05e-10!169;UBERON:0000924!9.22e-10!173;UBERON:0006601!9.22e-10!173;UBERON:0001950!6.28e-09!20;UBERON:0002420!5.30e-08!9;UBERON:0007245!5.30e-08!9;UBERON:0010009!5.30e-08!9;UBERON:0010011!5.30e-08!9;UBERON:0000454!5.30e-08!9;UBERON:0002308!6.23e-08!9;UBERON:0000125!6.23e-08!9;UBERON:0003076!6.77e-08!15;UBERON:0003057!6.77e-08!15;UBERON:0001894!4.88e-07!7;UBERON:0006222!4.88e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.57e-30;53!UBERON:0002616;3.57e-30;53!UBERON:0002780;7.81e-28;41!UBERON:0001890;7.81e-28;41!UBERON:0001893;1.51e-23;34!UBERON:0003528;2.57e-23;34!UBERON:0002020;2.57e-23;34!UBERON:0002791;7.70e-21;32!UBERON:0001869;7.71e-21;32!UBERON:0001017;1.70e-17;75!UBERON:0002619;3.26e-17;22!UBERON:0001894;6.63e-17;7!UBERON:0001950;2.96e-16;20!UBERON:0000955;3.84e-16;68!UBERON:0002420;5.59e-16;9!UBERON:0007245;5.59e-16;9!UBERON:0010009;5.59e-16;9!UBERON:0010011;5.59e-16;9!UBERON:0000454;5.59e-16;9!UBERON:0000125;1.63e-15;9!UBERON:0002308;1.63e-15;9!UBERON:0002298;4.41e-15;6!UBERON:0001016;4.99e-15;83!UBERON:0000956;8.20e-15;25!UBERON:0000203;8.20e-15;25!UBERON:0007023;4.80e-14;114!UBERON:0000200;9.38e-14;6!UBERON:0004732;1.34e-11;13!UBERON:0009663;2.39e-11;7!UBERON:0003296;1.40e-10;4!UBERON:0010133;1.40e-10;4!UBERON:0002784;1.55e-10;4!UBERON:0004733;1.05e-09;12!UBERON:0002028;1.05e-09;12!UBERON:0000369;1.82e-09;4!UBERON:0002435;1.82e-09;4!UBERON:0000204;1.82e-09;4!UBERON:0001896;7.23e-09;3!UBERON:0005290;7.23e-09;3!UBERON:0000349;1.21e-08;5!UBERON:0000988;6.50e-08;3!UBERON:0001870;6.50e-08;3!UBERON:0002240;6.50e-08;3!UBERON:0005174;6.50e-08;3!UBERON:0001137;6.50e-08;3!UBERON:0001872;1.43e-07;5!UBERON:0005383;1.64e-07;3!UBERON:0005382;1.64e-07;3 | |||
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| ||
|short_description=p12@NFIA | |short_description=p12@NFIA | ||
}} | }} |
Latest revision as of 18:16, 18 September 2015
Short description: | p12@NFIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NFIA_5end |
Coexpression cluster: | C3989_pineal_pituitary_optic_spinal_corpus_substantia_thalamus |
Association with transcript: | -25bp_to_ENST00000407417, NM_001145511, uc001czy.2_5end |
EntrezGene: | NFIA |
HGNC: | 7784 |
UniProt: | F5H0R0B4DRJ3Q12857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.24e-12 | 11 |
mature alpha-beta T cell | 1.07e-08 | 18 |
alpha-beta T cell | 1.07e-08 | 18 |
immature T cell | 1.07e-08 | 18 |
mature T cell | 1.07e-08 | 18 |
immature alpha-beta T cell | 1.07e-08 | 18 |
T cell | 1.14e-08 | 25 |
pro-T cell | 1.14e-08 | 25 |