FFCP PHASE1:Hg19::chr1:37500087..37500134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2899 | |EntrezGene=2899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4581 | |HGNC=4581 | ||
|TSSclassifier=strong | |||
|UniProt=A9Z1Z8,Q13003 | |UniProt=A9Z1Z8,Q13003 | ||
|association_with_transcript=-243bp_to_NM_000831,uc001caz.2,uc001cba.1_5end | |association_with_transcript=-243bp_to_NM_000831,uc001caz.2,uc001cba.1_5end | ||
|cluster_id=chr1:37500087..37500134,- | |||
|description=CAGE_peak_1_at_GRIK3_5end | |description=CAGE_peak_1_at_GRIK3_5end | ||
|id=chr1:37500087..37500134,- | |id=chr1:37500087..37500134,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.09e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.13e-18;82 | |||
|ontology_enrichment_disease=DOID:171!8.04e-09!10;DOID:3095!9.64e-08!22;DOID:2994!9.64e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;5.39e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.30e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.22e-63!115;UBERON:0001017!1.20e-57!82;UBERON:0001049!1.03e-56!57;UBERON:0005068!1.03e-56!57;UBERON:0006241!1.03e-56!57;UBERON:0007135!1.03e-56!57;UBERON:0000073!3.82e-56!94;UBERON:0001016!3.82e-56!94;UBERON:0005743!4.09e-56!86;UBERON:0000955!1.52e-47!69;UBERON:0006238!1.52e-47!69;UBERON:0002616!1.66e-47!59;UBERON:0003080!4.10e-47!42;UBERON:0002780!2.59e-46!41;UBERON:0001890!2.59e-46!41;UBERON:0006240!2.59e-46!41;UBERON:0002346!1.57e-45!90;UBERON:0003075!5.58e-42!86;UBERON:0007284!5.58e-42!86;UBERON:0001893!5.44e-39!34;UBERON:0002020!8.09e-39!34;UBERON:0003528!8.09e-39!34;UBERON:0002791!1.08e-37!33;UBERON:0001869!6.21e-37!32;UBERON:0000924!1.51e-34!173;UBERON:0006601!1.51e-34!173;UBERON:0003056!5.87e-33!61;UBERON:0004121!1.12e-31!169;UBERON:0002619!9.90e-29!22;UBERON:0000956!9.92e-29!25;UBERON:0000203!9.92e-29!25;UBERON:0000033!5.25e-27!123;UBERON:0000153!8.87e-27!129;UBERON:0007811!8.87e-27!129;UBERON:0001950!1.07e-26!20;UBERON:0000025!1.26e-11!194;UBERON:0002420!2.03e-11!9;UBERON:0007245!2.03e-11!9;UBERON:0010009!2.03e-11!9;UBERON:0010011!2.03e-11!9;UBERON:0000454!2.03e-11!9;UBERON:0002308!2.08e-11!9;UBERON:0000125!2.08e-11!9;UBERON:0003076!7.29e-11!15;UBERON:0003057!7.29e-11!15;UBERON:0001871!1.11e-10!7;UBERON:0004111!5.00e-10!241;UBERON:0002298!6.50e-10!8;UBERON:0009663!2.66e-09!7;UBERON:0003135!5.65e-09!11;UBERON:0000922!5.89e-09!612;UBERON:0000064!6.72e-09!219;UBERON:0000200!8.71e-09!6;UBERON:0001894!1.37e-08!7;UBERON:0006222!1.37e-08!7;UBERON:0000468!3.84e-08!659;UBERON:0004733!4.17e-08!12;UBERON:0002028!4.17e-08!12;UBERON:0007277!4.17e-08!12;UBERON:0000477!6.79e-08!286;UBERON:0001872!8.77e-08!5;UBERON:0002021!9.40e-08!5;UBERON:0004732!2.62e-07!13;UBERON:0000923!3.81e-07!604;UBERON:0005291!3.81e-07!604;UBERON:0006598!3.81e-07!604;UBERON:0002532!3.81e-07!604;UBERON:0000062!4.23e-07!511;UBERON:0002050!4.44e-07!605;UBERON:0005423!4.44e-07!605;UBERON:0000349!5.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.92e-46;41!UBERON:0001890;1.92e-46;41!UBERON:0001893;4.19e-46;34!UBERON:0001869;4.87e-46;32!UBERON:0003528;5.98e-46;34!UBERON:0002020;5.98e-46;34!UBERON:0002791;1.27e-45;32!UBERON:0000073;3.32e-43;53!UBERON:0002616;3.32e-43;53!UBERON:0002619;7.01e-42;22!UBERON:0000956;2.34e-39;25!UBERON:0000203;2.34e-39;25!UBERON:0001950;6.56e-39;20!UBERON:0000955;6.35e-31;68!UBERON:0001017;3.80e-30;75!UBERON:0001016;5.07e-28;83!UBERON:0000125;4.79e-16;9!UBERON:0002308;4.79e-16;9!UBERON:0002420;7.33e-16;9!UBERON:0007245;7.33e-16;9!UBERON:0010009;7.33e-16;9!UBERON:0010011;7.33e-16;9!UBERON:0000454;7.33e-16;9!UBERON:0001871;2.73e-13;6!UBERON:0011216;7.65e-13;132!UBERON:0009663;7.70e-13;7!UBERON:0007023;1.17e-12;114!UBERON:0000200;2.90e-12;6!UBERON:0001894;5.07e-12;7!UBERON:0004733;7.61e-12;12!UBERON:0002028;7.61e-12;12!UBERON:0002298;1.78e-11;6!UBERON:0001872;7.86e-11;5!UBERON:0002021;7.94e-11;5!UBERON:0004732;8.69e-11;13!UBERON:0000349;1.91e-09;5!UBERON:0000369;2.92e-08;4!UBERON:0002435;2.92e-08;4!UBERON:0000204;2.92e-08;4!UBERON:0003296;1.30e-07;4!UBERON:0010133;1.30e-07;4!UBERON:0002680;1.38e-07;9!UBERON:0001895;1.38e-07;9!UBERON:0002784;1.97e-07;4!UBERON:0001870;6.15e-07;3!UBERON:0000988;8.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.39e-78,81;UBERON:0001049,4.35e-78,56;UBERON:0005068,4.35e-78,56;UBERON:0006241,4.35e-78,56;UBERON:0007135,4.35e-78,56;UBERON:0001016,3.75e-77,89;UBERON:0000073,2.86e-76,53;UBERON:0002616,2.86e-76,53;UBERON:0000955,6.89e-70,68;UBERON:0006238,6.89e-70,68;UBERON:0002780,8.97e-66,41;UBERON:0001890,8.97e-66,41;UBERON:0003080,8.97e-66,41;UBERON:0006240,8.97e-66,41;UBERON:0002346,4.19e-57,86;UBERON:0003075,9.07e-56,82;UBERON:0007284,9.07e-56,82;UBERON:0001893,7.93e-55,34;UBERON:0003528,1.42e-54,34;UBERON:0002020,1.42e-54,34;UBERON:0001869,9.45e-52,32;UBERON:0002791,2.69e-51,32;UBERON:0003056,1.70e-45,61;UBERON:0010371,7.43e-45,104;UBERON:0007023,1.39e-43,114;UBERON:0004121,3.41e-42,171;UBERON:0000924,3.41e-42,171;UBERON:0006601,3.41e-42,171;UBERON:0002619,4.46e-42,22;UBERON:0000956,1.56e-39,25;UBERON:0000203,1.56e-39,25;UBERON:0001950,4.93e-39,20;UBERON:0011216,4.02e-37,223;UBERON:0010314,2.50e-30,132;UBERON:0000025,5.61e-18,192;UBERON:0002420,3.14e-16,9;UBERON:0007245,3.14e-16,9;UBERON:0010009,3.14e-16,9;UBERON:0010011,3.14e-16,9;UBERON:0000454,3.14e-16,9;UBERON:0000125,3.26e-16,9;UBERON:0002308,3.26e-16,9;UBERON:0003076,9.33e-14,15;UBERON:0003057,9.33e-14,15;UBERON:0004111,1.97e-13,240;UBERON:0001871,2.05e-13,6;UBERON:0009663,4.44e-13,7;UBERON:0000200,2.58e-12,6;UBERON:0001894,5.09e-12,7;UBERON:0006222,5.09e-12,7;UBERON:0004733,6.93e-12,12;UBERON:0002028,6.93e-12,12;UBERON:0007277,6.93e-12,12;UBERON:0002298,1.74e-11,6;UBERON:0001872,7.97e-11,5;UBERON:0004732,7.98e-11,13;UBERON:0002021,8.83e-11,5;UBERON:0000349,1.17e-09,5;UBERON:0000923,1.79e-09,560;UBERON:0010316,1.79e-09,560;UBERON:0005291,1.79e-09,560;UBERON:0006598,1.79e-09,560;UBERON:0010317,1.79e-09,560;UBERON:0002532,1.79e-09,560;UBERON:0002050,3.00e-09,564;UBERON:0000483,8.46e-09,306;UBERON:0000119,1.42e-08,309;UBERON:0000369,2.22e-08,4;UBERON:0002435,2.22e-08,4;UBERON:0000204,2.22e-08,4;UBERON:0010082,2.22e-08,4;UBERON:0005423,2.50e-08,581;UBERON:0000922,3.10e-08,592;UBERON:0002680,1.44e-07,9;UBERON:0001895,1.44e-07,9;UBERON:0010092,1.44e-07,9;UBERON:0003296,1.50e-07,4;UBERON:0010133,1.50e-07,4;UBERON:0002784,2.59e-07,4;UBERON:0001870,5.62e-07,3;UBERON:0000988,9.68e-07,3 | |||
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|short_description=p1@GRIK3 | |short_description=p1@GRIK3 | ||
}} | }} |
Latest revision as of 21:39, 17 September 2015
Short description: | p1@GRIK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIK3_5end |
Coexpression cluster: | NA |
Association with transcript: | -243bp_to_NM_000831, uc001caz.2, uc001cba.1_5end |
EntrezGene: | GRIK3 |
HGNC: | 4581 |
UniProt: | A9Z1Z8Q13003 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.09e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.30e-09 | 4 |