FFCP PHASE1:Hg19::chr14:95027772..95027791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5267,5104 | |EntrezGene=5267,5104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8948,8723 | |HGNC=8948,8723 | ||
|TSSclassifier=strong | |||
|UniProt=P29622,G3V264 | |UniProt=P29622,G3V264 | ||
|association_with_transcript=0bp_to_ENST00000298841,ENST00000553780,ENST00000554220,ENST00000555095,NM_006215,uc001ydk.2,uc010avd.2_5end | |association_with_transcript=0bp_to_ENST00000298841,ENST00000553780,ENST00000554220,ENST00000555095,NM_006215,uc001ydk.2,uc010avd.2_5end | ||
|cluster_id=chr14:95027772..95027791,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SERPINA4_5end,CAGE_peak_2_at_SERPINA5_5end | |description=CAGE_peak_1_at_SERPINA4_5end,CAGE_peak_2_at_SERPINA5_5end | ||
|id=chr14:95027772..95027791,+ | |id=chr14:95027772..95027791,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.93e-21!12;CL:0000417!8.93e-21!12;CL:0000668!8.93e-21!12;CL:0000414!8.93e-21!12;CL:0000412!8.93e-21!12;CL:0000182!8.93e-21!12;CL:0000223!2.19e-07!59 | |ontology_enrichment_celltype=CL:0000181!8.93e-21!12;CL:0000417!8.93e-21!12;CL:0000668!8.93e-21!12;CL:0000414!8.93e-21!12;CL:0000412!8.93e-21!12;CL:0000182!8.93e-21!12;CL:0000223!2.19e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.04e-26;12!CL:0002563;1.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.89e-26,12;CL:0000223,1.38e-11,58;CL:0002563,1.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-28;11!UBERON:0009497;4.42e-24;13!UBERON:0003104;3.07e-23;31!UBERON:0007297;6.41e-14;2!UBERON:0006242;4.07e-08;1!CL:0000223;6.68e-08;58!UBERON:0005754;7.97e-08;1!UBERON:0001041;2.19e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!8.41e-29!25;UBERON:0000015!8.41e-29!25;UBERON:0002423!8.41e-29!25;UBERON:0006235!8.41e-29!25;UBERON:0004161!8.41e-29!25;UBERON:0008835!2.22e-28!22;UBERON:0003894!2.22e-28!22;UBERON:0005057!4.35e-27!26;UBERON:0009854!5.18e-27!23;UBERON:0003929!1.23e-24!54;UBERON:0007499!1.32e-24!25;UBERON:0002107!4.32e-24!19;UBERON:0006925!4.32e-24!19;UBERON:0008836!4.32e-24!19;UBERON:0009856!1.52e-23!26;UBERON:0005172!2.80e-17!55;UBERON:0005173!2.80e-17!55;UBERON:0004921!4.73e-17!129;UBERON:0004185!4.73e-17!129;UBERON:0002368!1.46e-16!35;UBERON:0002417!3.58e-15!61;UBERON:0000916!3.58e-15!61;UBERON:0005911!1.55e-14!82;UBERON:0000949!2.20e-14!45;UBERON:0001007!2.32e-14!155;UBERON:0001555!2.32e-14!155;UBERON:0007026!2.32e-14!155;UBERON:0002365!7.83e-14!31;UBERON:0002330!7.83e-14!31;UBERON:0002530!1.48e-13!59;UBERON:0005409!2.79e-13!35;UBERON:0006947!7.81e-13!3;UBERON:0004054!7.81e-13!3;UBERON:0004119!1.31e-12!169;UBERON:0000925!1.31e-12!169;UBERON:0006595!1.31e-12!169;UBERON:0000077!1.04e-11!130;UBERON:0001041!4.24e-10!98;UBERON:0000160!7.39e-10!27;UBERON:0005904!9.83e-10!4;UBERON:0005177!5.18e-08!107;UBERON:0000466!6.68e-08!126;UBERON:0000490!8.90e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.14e-33;19!UBERON:0006925;6.14e-33;19!UBERON:0002423;6.29e-30;25!UBERON:0006947;7.17e-20;3!UBERON:0004054;7.17e-20;3!UBERON:0002365;4.55e-19;31!UBERON:0002330;4.55e-19;31!UBERON:0002368;6.49e-17;33!UBERON:0005904;4.72e-15;4!UBERON:0000949;3.14e-14;43!UBERON:0005409;5.74e-13;22!UBERON:0005172;1.99e-12;52!UBERON:0005173;1.99e-12;52!UBERON:0001007;4.29e-10;81!UBERON:0002417;1.22e-09;58!UBERON:0000916;1.22e-09;58!UBERON:0000160;8.00e-09;17!UBERON:0002530;2.10e-08;57!UBERON:0000998;7.97e-08;1!UBERON:0006868;7.97e-08;1!UBERON:0001301;8.80e-08;1!UBERON:0001000;1.11e-07;1!UBERON:0005352;1.11e-07;1!UBERON:0004921;1.24e-07;33!UBERON:0001242;1.87e-07;4!UBERON:0001262;1.87e-07;4!UBERON:0004786;1.87e-07;4!UBERON:0004808;1.87e-07;4!UBERON:0001277;1.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.64e-33,19;UBERON:0006925,5.64e-33,19;UBERON:0008836,5.64e-33,19;UBERON:0009497,5.86e-30,25;UBERON:0000015,5.86e-30,25;UBERON:0002423,5.86e-30,25;UBERON:0006235,5.86e-30,25;UBERON:0004161,5.86e-30,25;UBERON:0008835,3.02e-28,22;UBERON:0003894,3.02e-28,22;UBERON:0009854,6.05e-27,23;UBERON:0007499,1.19e-24,25;UBERON:0005172,4.13e-24,54;UBERON:0005173,4.13e-24,54;UBERON:0009856,1.23e-23,26;UBERON:0002417,2.13e-21,60;UBERON:0000916,2.13e-21,60;UBERON:0003929,4.88e-21,54;UBERON:0006947,7.40e-20,3;UBERON:0004054,7.40e-20,3;UBERON:0002365,1.51e-19,31;UBERON:0002330,1.51e-19,31;UBERON:0002368,4.10e-17,35;UBERON:0000949,9.92e-16,45;UBERON:0005904,4.84e-15,4;UBERON:0004921,4.43e-14,118;UBERON:0002530,1.01e-13,59;UBERON:0005177,2.75e-13,101;UBERON:0005911,6.60e-13,82;UBERON:0001007,2.75e-12,145;UBERON:0001555,2.75e-12,145;UBERON:0007026,2.75e-12,145;UBERON:0005409,2.34e-11,25;UBERON:0004119,8.72e-11,160;UBERON:0000925,8.72e-11,160;UBERON:0006595,8.72e-11,160;UBERON:0009569,4.44e-10,112;UBERON:0000160,8.34e-09,17;UBERON:0001041,1.31e-08,87;UBERON:0003104,2.71e-08,160;UBERON:0009142,2.71e-08,160;UBERON:0000998,7.97e-08,1;UBERON:0006868,7.97e-08,1;UBERON:0005256,9.06e-08,122;UBERON:0001301,9.10e-08,1;UBERON:0001000,1.11e-07,1;UBERON:0005352,1.11e-07,1;UBERON:0001242,1.87e-07,4;UBERON:0001262,1.87e-07,4;UBERON:0004786,1.87e-07,4;UBERON:0004808,1.87e-07,4;UBERON:0001277,1.87e-07,4;UBERON:0011216,1.95e-07,223 | |||
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| ||
|short_description=p1@SERPINA4,p2@SERPINA5 | |short_description=p1@SERPINA4,p2@SERPINA5 | ||
}} | }} |
Latest revision as of 18:36, 16 September 2015
Short description: | p1@SERPINA4, p2@SERPINA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINA4_5end, CAGE_peak_2_at_SERPINA5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000298841, ENST00000553780, ENST00000554220, ENST00000555095, NM_006215, uc001ydk.2, uc010avd.2_5end |
EntrezGene: | 5267,5104 |
HGNC: | 8723&submit=Submit 8948, 8723 |
UniProt: | P29622G3V264 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.89e-26 | 12 |
endodermal cell | 1.38e-11 | 58 |
intestinal epithelial cell | 1.87e-07 | 4 |