FFCP PHASE1:Hg19::chr14:94640408..94640419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57718 | |EntrezGene=57718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23788 | |HGNC=23788 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUP7 | |UniProt=Q6NUP7 | ||
|association_with_transcript=-229bp_to_ENST00000304338,ENST00000555690,NM_020958,NM_058237,uc001ycr.2,uc001ycs.1_5end | |association_with_transcript=-229bp_to_ENST00000304338,ENST00000555690,NM_020958,NM_058237,uc001ycr.2,uc001ycs.1_5end | ||
|cluster_id=chr14:94640408..94640419,+ | |||
|coexpression_cluster_id=C278 | |||
|description=CAGE_peak_7_at_PPP4R4_5end | |description=CAGE_peak_7_at_PPP4R4_5end | ||
|id=chr14:94640408..94640419,+ | |id=chr14:94640408..94640419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.81e-70!57;UBERON:0005068!3.81e-70!57;UBERON:0006241!3.81e-70!57;UBERON:0007135!3.81e-70!57;UBERON:0002780!1.29e-69!41;UBERON:0001890!1.29e-69!41;UBERON:0006240!1.29e-69!41;UBERON:0003080!8.28e-68!42;UBERON:0002616!1.70e-67!59;UBERON:0000955!1.73e-62!69;UBERON:0006238!1.73e-62!69;UBERON:0001017!2.19e-54!82;UBERON:0001893!2.11e-53!34;UBERON:0002020!4.63e-53!34;UBERON:0003528!4.63e-53!34;UBERON:0001869!1.46e-52!32;UBERON:0003075!4.15e-52!86;UBERON:0007284!4.15e-52!86;UBERON:0005743!1.84e-51!86;UBERON:0002791!2.81e-50!33;UBERON:0002346!2.21e-49!90;UBERON:0007023!2.57e-46!115;UBERON:0000073!9.07e-46!94;UBERON:0001016!9.07e-46!94;UBERON:0003056!1.57e-44!61;UBERON:0002619!1.21e-41!22;UBERON:0000956!2.61e-36!25;UBERON:0000203!2.61e-36!25;UBERON:0001950!2.83e-35!20;UBERON:0000033!2.58e-33!123;UBERON:0000153!2.45e-31!129;UBERON:0007811!2.45e-31!129;UBERON:0004121!7.65e-26!169;UBERON:0000924!5.07e-25!173;UBERON:0006601!5.07e-25!173;UBERON:0000200!3.35e-21!6;UBERON:0000025!3.92e-20!194;UBERON:0002420!4.06e-19!9;UBERON:0007245!4.06e-19!9;UBERON:0010009!4.06e-19!9;UBERON:0010011!4.06e-19!9;UBERON:0000454!4.06e-19!9;UBERON:0000349!1.33e-18!5;UBERON:0002308!3.67e-18!9;UBERON:0000125!3.67e-18!9;UBERON:0001894!1.03e-17!7;UBERON:0006222!1.03e-17!7;UBERON:0001871!7.23e-16!7;UBERON:0004111!2.79e-15!241;UBERON:0000483!8.31e-14!309;UBERON:0000119!1.43e-13!312;UBERON:0009663!8.55e-13!7;UBERON:0000477!3.42e-12!286;UBERON:0001872!8.53e-12!5;UBERON:0000064!1.33e-11!219;UBERON:0002771!3.00e-11!3;UBERON:0000988!2.00e-10!3;UBERON:0000475!4.65e-10!365;UBERON:0002298!6.15e-10!8;UBERON:0000062!3.73e-09!511;UBERON:0004733!4.11e-09!12;UBERON:0002028!4.11e-09!12;UBERON:0007277!4.11e-09!12;UBERON:0000369!6.59e-09!4;UBERON:0002435!6.59e-09!4;UBERON:0000204!6.59e-09!4;UBERON:0010082!6.59e-09!4;UBERON:0001954!1.23e-08!2;UBERON:0003022!1.23e-08!2;UBERON:0002421!1.23e-08!2;UBERON:0002600!1.23e-08!2;UBERON:0001870!1.43e-08!2;UBERON:0001876!1.43e-08!2;UBERON:0003296!1.76e-08!4;UBERON:0010133!1.76e-08!4;UBERON:0004732!2.30e-08!13;UBERON:0001875!5.13e-08!2;UBERON:0006514!5.13e-08!2;UBERON:0001897!5.31e-08!2;UBERON:0001905!5.50e-08!2;UBERON:0002757!5.50e-08!2;UBERON:0010134!5.50e-08!2;UBERON:0002784!5.50e-08!2;UBERON:0005408!5.50e-08!2;UBERON:0001899!5.50e-08!2;UBERON:0000481!1.39e-07!347;UBERON:0002148!2.53e-07!2;UBERON:0009662!2.53e-07!2;UBERON:0003076!3.63e-07!15;UBERON:0003057!3.63e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;3.05e-34;1!UBERON:0007190;7.05e-34;1!UBERON:0002420;1.17e-33;9!UBERON:0007245;1.17e-33;9!UBERON:0010009;1.17e-33;9!UBERON:0010011;1.17e-33;9!UBERON:0000454;1.17e-33;9!UBERON:0001869;1.14e-30;32!UBERON:0001893;1.62e-28;34!UBERON:0000349;1.70e-27;5!UBERON:0002791;3.21e-24;32!UBERON:0003528;3.23e-24;34!UBERON:0002020;3.23e-24;34!UBERON:0009663;8.22e-20;7!UBERON:0002780;7.50e-19;41!UBERON:0001890;7.50e-19;41!UBERON:0001876;5.48e-18;2!UBERON:0001954;7.05e-18;2!UBERON:0003022;7.05e-18;2!UBERON:0002421;7.05e-18;2!UBERON:0002600;7.05e-18;2!UBERON:0001875;1.07e-17;2!UBERON:0006514;1.07e-17;2!UBERON:0000125;1.17e-15;9!UBERON:0002308;1.17e-15;9!UBERON:0002619;1.03e-13;22!UBERON:0005383;2.19e-12;3!UBERON:0005382;2.19e-12;3!UBERON:0001870;2.89e-12;3!UBERON:0000956;3.19e-12;25!UBERON:0000203;3.19e-12;25!UBERON:0000955;1.56e-11;68!UBERON:0000073;8.07e-11;53!UBERON:0002616;8.07e-11;53!UBERON:0001017;6.20e-10;75!UBERON:0000369;1.27e-09;4!UBERON:0002435;1.27e-09;4!UBERON:0000204;1.27e-09;4!UBERON:0001016;1.34e-07;83!UBERON:0001950;2.69e-07;20!UBERON:0000200;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.37e-36,32;UBERON:0001893,3.60e-34,34;UBERON:0001874,3.61e-34,1;UBERON:0007190,7.06e-34,1;UBERON:0002420,1.39e-33,9;UBERON:0007245,1.39e-33,9;UBERON:0010009,1.39e-33,9;UBERON:0010011,1.39e-33,9;UBERON:0000454,1.39e-33,9;UBERON:0002780,1.39e-28,41;UBERON:0001890,1.39e-28,41;UBERON:0003080,1.39e-28,41;UBERON:0006240,1.39e-28,41;UBERON:0000349,1.59e-27,5;UBERON:0002791,2.09e-25,32;UBERON:0003528,5.44e-24,34;UBERON:0002020,5.44e-24,34;UBERON:0000073,2.29e-22,53;UBERON:0002616,2.29e-22,53;UBERON:0001049,3.21e-21,56;UBERON:0005068,3.21e-21,56;UBERON:0006241,3.21e-21,56;UBERON:0007135,3.21e-21,56;UBERON:0009663,9.49e-20,7;UBERON:0003056,1.49e-19,61;UBERON:0001876,5.48e-18,2;UBERON:0001954,6.48e-18,2;UBERON:0003022,6.48e-18,2;UBERON:0002421,6.48e-18,2;UBERON:0002600,6.48e-18,2;UBERON:0001875,1.27e-17,2;UBERON:0006514,1.27e-17,2;UBERON:0000955,2.22e-17,68;UBERON:0006238,2.22e-17,68;UBERON:0000125,1.31e-15,9;UBERON:0002308,1.31e-15,9;UBERON:0001017,9.81e-15,81;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0002346,4.44e-14,86;UBERON:0002619,9.64e-14,22;UBERON:0001016,2.44e-13,89;UBERON:0005383,2.31e-12,3;UBERON:0005382,2.31e-12,3;UBERON:0001870,2.59e-12,3;UBERON:0000956,3.01e-12,25;UBERON:0000203,3.01e-12,25;UBERON:0010371,9.68e-12,104;UBERON:0007023,7.60e-11,114;UBERON:0000369,1.32e-09,4;UBERON:0002435,1.32e-09,4;UBERON:0000204,1.32e-09,4;UBERON:0010082,1.32e-09,4;UBERON:0010314,2.38e-09,132;UBERON:0001950,2.60e-07,20;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0000200,8.97e-07,6 | |||
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|short_description=p7@PPP4R4 | |short_description=p7@PPP4R4 | ||
}} | }} |
Latest revision as of 17:14, 16 September 2015
Short description: | p7@PPP4R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPP4R4_5end |
Coexpression cluster: | C278_amygdala_hippocampus_insula_medial_putamen_temporal_olfactory |
Association with transcript: | -229bp_to_ENST00000304338, ENST00000555690, NM_020958, NM_058237, uc001ycr.2, uc001ycs.1_5end |
EntrezGene: | PPP4R4 |
HGNC: | 23788 |
UniProt: | Q6NUP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data