FFCP PHASE1:Hg19::chr1:13840448..13840477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126755 | |EntrezGene=126755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27005 | |HGNC=27005 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT99 | |UniProt=Q5VT99 | ||
|association_with_transcript=65bp_to_ENST00000376085_5end | |association_with_transcript=65bp_to_ENST00000376085_5end | ||
|cluster_id=chr1:13840448..13840477,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_LRRC38_5end | |description=CAGE_peak_4_at_LRRC38_5end | ||
|id=chr1:13840448..13840477,- | |id=chr1:13840448..13840477,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.00e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;7.85e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.75e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.52e-21!115;UBERON:0005743!9.07e-12!86;UBERON:0001017!1.42e-11!82;UBERON:0002346!2.16e-11!90;UBERON:0008814!2.90e-11!15;UBERON:0000955!3.22e-11!69;UBERON:0006238!3.22e-11!69;UBERON:0001049!5.67e-11!57;UBERON:0005068!5.67e-11!57;UBERON:0006241!5.67e-11!57;UBERON:0007135!5.67e-11!57;UBERON:0000153!1.85e-10!129;UBERON:0007811!1.85e-10!129;UBERON:0002616!2.61e-10!59;UBERON:0000073!5.01e-10!94;UBERON:0001016!5.01e-10!94;UBERON:0003075!6.10e-10!86;UBERON:0007284!6.10e-10!86;UBERON:0009722!1.63e-09!11;UBERON:0007690!1.63e-09!11;UBERON:0001042!2.94e-08!10;UBERON:0009145!2.94e-08!10;UBERON:0000924!3.79e-08!173;UBERON:0006601!3.79e-08!173;UBERON:0000033!7.80e-08!123;UBERON:0006562!1.98e-07!11;UBERON:0002046!2.67e-07!5;UBERON:0004117!2.67e-07!5;UBERON:0007689!2.67e-07!5;UBERON:0007123!2.67e-07!5;UBERON:0003091!2.67e-07!5;UBERON:0004121!3.97e-07!169;UBERON:0000483!7.70e-07!309 | |||
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| ||
|short_description=p4@LRRC38 | |short_description=p4@LRRC38 | ||
}} | }} |
Latest revision as of 15:41, 16 September 2015
Short description: | p4@LRRC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC38_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 65bp_to_ENST00000376085_5end |
EntrezGene: | LRRC38 |
HGNC: | 27005 |
UniProt: | Q5VT99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.75e-09 | 1 |