FFCP PHASE1:Hg19::chr11:2159773..2159793,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2159773..2159793,-
|short_description=p33@IGF2
|description=CAGE_peak_33_at_IGF2_5end
|association_with_transcript=410bp_to_ENST00000381406,NM_000612,uc00...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=410bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|cluster_id=chr11:2159773..2159793,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_33_at_IGF2_5end | |||
|id=chr11:2159773..2159793,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.85e-15;19!CL:0002541;5.69e-07;3!CL:0002577;7.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.39e-15,19;CL:0002541,5.61e-07,3;CL:0002577,7.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.33e-17!115;UBERON:0005631!5.86e-14!14;UBERON:0000158!5.86e-14!14;UBERON:0000481!6.35e-12!347;UBERON:0000478!1.12e-10!24;UBERON:0004119!5.75e-09!169;UBERON:0000925!5.75e-09!169;UBERON:0006595!5.75e-09!169;UBERON:0000062!9.24e-09!511;UBERON:0002616!1.07e-08!59;UBERON:0000468!1.11e-08!659;UBERON:0003124!3.73e-08!7;UBERON:0000064!4.54e-08!219;UBERON:0000475!1.29e-07!365;UBERON:0000955!1.48e-07!69;UBERON:0006238!1.48e-07!69;UBERON:0000305!1.98e-07!7;UBERON:0003075!1.99e-07!86;UBERON:0007284!1.99e-07!86;UBERON:0000922!2.15e-07!612;UBERON:0001049!2.84e-07!57;UBERON:0005068!2.84e-07!57;UBERON:0006241!2.84e-07!57;UBERON:0007135!2.84e-07!57;UBERON:0005743!3.95e-07!86;UBERON:0001017!6.02e-07!82;UBERON:0002346!6.19e-07!90;UBERON:0004923!6.48e-07!57;UBERON:0001046!8.44e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.06e-15;24!UBERON:0005631;3.90e-15;10!UBERON:0000158;3.90e-15;10!UBERON:0000305;6.08e-10;7!UBERON:0001987;1.62e-08;4!UBERON:0000922;1.67e-08;49!UBERON:0005409;3.58e-08;22!UBERON:0000160;9.80e-08;17!UBERON:0003124;5.69e-07;3!UBERON:0000920;5.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.39e-22,14;UBERON:0000158,7.39e-22,14;UBERON:0000478,2.31e-15,24;UBERON:0003124,7.79e-14,7;UBERON:0000305,7.26e-10,7;UBERON:0001987,1.61e-08,4;UBERON:0004340,1.61e-08,4;UBERON:0004871,1.68e-08,8;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0000160,9.06e-08,17;UBERON:0000920,5.61e-07,3;UBERON:0005409,5.73e-07,25;UBERON:0001008,7.48e-07,48;UBERON:0004923,8.86e-07,66;UBERON:0004921,9.46e-07,118 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,2.61701557230111,0,0,0,0.491467873003018,0,6.55324116390517,7.12170841216825,0.74259811776028,0.662794751455832,0,0,0,0,0.861847406537515,3.26401105990805,3.44800193625897,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.869079113764942,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,2.30470369792,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,4.75201142912821,3.4617370098998,0,0,0,0.250237039743928,0,0.877955241761676,0,0.751190294532984,0,0,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,1.04574548582567,0.725627385107593,0,0,0,0,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,0,0,1.18157981336281,0,8.97815601364729,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,2.61576041299968,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,2.7165818795048,8.68194568626309,0.823240336780769,0,1.77695974371273,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,0,1.35632511849868,1.66376689224646,0.356857977594324,1.26161932027148,1.7571212248907,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,22.9087354231406,24.0200396667599,0,0,0,6.66880657181771,14.9791895559447,18.7481981864402,0,0.767309866440312,0,0,0.511707249066704,0.64341568457443,0,0,0,0,0,0,30.2148623979056,0.802025881213139,0,0.34444334449382,0.364182336013434,1.04899531967539,0.902399225814824,0.308061348417659,0,1.46139224653261,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0.325378394664303,3.60643540767028,0,0.165018999841176,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0.580066775656914,0.255679882248303,4.45160178233687,0.661139661443912,0.768760269460425,0,0.708104465988849,0,0,0,0,0,0,0,0,0.372158369359667,2.84741482246853,1.33441135746677,0,0.42793898803392,0,0,1.2591072030832,1.09814811894422,0.117812402345686,0,0,0,0.975267478179181,0,0,2.45699840534374,0.282810863907425,0,0,0,0,0,0,0,0,0,0.717056761020258,1.08073945114433,0,0,0,0,0,0,0,1.34060455107157,0,4.61304623806218,3.87454835404107,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0.284136146806413,19.0995587790152,20.1935982966194,27.6444631889309,0,0,0,0,0.844501632511974,0.398495976502139,0.276283915531148,0.251932747854276,0,0,0,0,0,0,1.08507746200627,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.774054819518572,0,0.219385397153973,0,0,1.92375646259493,0,2.07507513949254,0,0,20.7350753825748,5.40425801070988,180.165754294299,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.530745387020035,4.888241159469,0,0,0,0.202203398942031,15.248975298677,0.234264445725339,0,0,0,0,4.83962864194656,1.22429104652196,5.62360558693543,0,0,0,0.330991955875499,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0.193978032976839,0.0882561266915003,3.61569185248852,0,0,0.316553979779393,0,0,0.213452994739353,3.79638258206047,0,0,30.8870996151536,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0.410716136675979,0,0,0,0.837847203816763,1.14580212005842,1.43574604915363,0.998395002494955,0.429226048136571,0.223171457441873,2.21705459206197,0.360299883542404,0,11.0296455230113,9.31299199707181,10.7845670166696,6.79149622451767,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.630445658393585,0.996637174564964,0.633602019116439,0,0,2.1440859791201,2.64836788146173,0,0,0,0,0,0,0,0.679872549120754,0.58620893471233,21.2011022259554,0.129282956361551,0.26446520348538,0,0,0.106787412567695,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0.705797459094515,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,1.19428766609585,3.20022211730523,0,0,3.78554694685953,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0.705351887381368,2.4499638188256,0.321146125482298,0,0,0.205116364240755,0.504143392443436,0.0691572524642179,0.322951291263702,1.42769420259154,0,0.235939446695481,0,0,0,0,4.97290555290687,1.65462722368366,0,0.781514011233092,0,0,0,0.135075169236789,0,0,0.126831620387814,1.64092442705466,0.548257766857182,0,0,0,1.07140367175657,0.336283722218824,1.21393120847326,0.91064876540519,7.5397014638243,0,0,0.203909198930495,0.131545547125698,0,0,1.64835494986079,0,1.96190514319652,10.9579046461139,0,0,2.50167904618297,0.316027223465453,0,8.86677188743155,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0.975343399858155,1.94228651156368,1.33461648913121,69.5888658802919,20.3998617084839,0,9.35068643258431,0,0,0,0,0.154348316215889,2.18559560503957,0,0.735444965261716,0.707029641304878,3.14093547383912,0,5.0718687310008,0,0.563903507879121,0.580120991762195,0,0,0,0,1.46067277649303,0,0.430018749454354,0.788857810965923,0,2.61810414204226,4.7612415646386,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,1.59135266258303,2.14371304124943,0.829169439458779,0.20686599172379,0.639701945702943,8.33225510123091,0,0.744896571550295,0,0.25458863311266,3.43599221228973,1.08858373948481,25.6674975813961,0.0673520530145875,0.358611026963382,8.31650891365033,1.05824249194267,0,0,2.78458126530419,46.9281884806909,0.733448665097199,4.06896178315738,1.99727032255654,0.603821380773079,0 | |phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,2.61701557230111,0,0,0,0.491467873003018,0,6.55324116390517,7.12170841216825,0.74259811776028,0.662794751455832,0,0,0,0,0.861847406537515,3.26401105990805,3.44800193625897,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.869079113764942,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,2.30470369792,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,4.75201142912821,3.4617370098998,0,0,0,0.250237039743928,0,0.877955241761676,0,0.751190294532984,0,0,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,1.04574548582567,0.725627385107593,0,0,0,0,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,0,0,1.18157981336281,0,8.97815601364729,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,2.61576041299968,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,2.7165818795048,8.68194568626309,0.823240336780769,0,1.77695974371273,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,0,1.35632511849868,1.66376689224646,0.356857977594324,1.26161932027148,1.7571212248907,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,22.9087354231406,24.0200396667599,0,0,0,6.66880657181771,14.9791895559447,18.7481981864402,0,0.767309866440312,0,0,0.511707249066704,0.64341568457443,0,0,0,0,0,0,30.2148623979056,0.802025881213139,0,0.34444334449382,0.364182336013434,1.04899531967539,0.902399225814824,0.308061348417659,0,1.46139224653261,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0.325378394664303,3.60643540767028,0,0.165018999841176,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0.580066775656914,0.255679882248303,4.45160178233687,0.661139661443912,0.768760269460425,0,0.708104465988849,0,0,0,0,0,0,0,0,0.372158369359667,2.84741482246853,1.33441135746677,0,0.42793898803392,0,0,1.2591072030832,1.09814811894422,0.117812402345686,0,0,0,0.975267478179181,0,0,2.45699840534374,0.282810863907425,0,0,0,0,0,0,0,0,0,0.717056761020258,1.08073945114433,0,0,0,0,0,0,0,1.34060455107157,0,4.61304623806218,3.87454835404107,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0.284136146806413,19.0995587790152,20.1935982966194,27.6444631889309,0,0,0,0,0.844501632511974,0.398495976502139,0.276283915531148,0.251932747854276,0,0,0,0,0,0,1.08507746200627,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.774054819518572,0,0.219385397153973,0,0,1.92375646259493,0,2.07507513949254,0,0,20.7350753825748,5.40425801070988,180.165754294299,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.530745387020035,4.888241159469,0,0,0,0.202203398942031,15.248975298677,0.234264445725339,0,0,0,0,4.83962864194656,1.22429104652196,5.62360558693543,0,0,0,0.330991955875499,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0.193978032976839,0.0882561266915003,3.61569185248852,0,0,0.316553979779393,0,0,0.213452994739353,3.79638258206047,0,0,30.8870996151536,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0.410716136675979,0,0,0,0.837847203816763,1.14580212005842,1.43574604915363,0.998395002494955,0.429226048136571,0.223171457441873,2.21705459206197,0.360299883542404,0,11.0296455230113,9.31299199707181,10.7845670166696,6.79149622451767,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.630445658393585,0.996637174564964,0.633602019116439,0,0,2.1440859791201,2.64836788146173,0,0,0,0,0,0,0,0.679872549120754,0.58620893471233,21.2011022259554,0.129282956361551,0.26446520348538,0,0,0.106787412567695,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0.705797459094515,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,1.19428766609585,3.20022211730523,0,0,3.78554694685953,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0.705351887381368,2.4499638188256,0.321146125482298,0,0,0.205116364240755,0.504143392443436,0.0691572524642179,0.322951291263702,1.42769420259154,0,0.235939446695481,0,0,0,0,4.97290555290687,1.65462722368366,0,0.781514011233092,0,0,0,0.135075169236789,0,0,0.126831620387814,1.64092442705466,0.548257766857182,0,0,0,1.07140367175657,0.336283722218824,1.21393120847326,0.91064876540519,7.5397014638243,0,0,0.203909198930495,0.131545547125698,0,0,1.64835494986079,0,1.96190514319652,10.9579046461139,0,0,2.50167904618297,0.316027223465453,0,8.86677188743155,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0.975343399858155,1.94228651156368,1.33461648913121,69.5888658802919,20.3998617084839,0,9.35068643258431,0,0,0,0,0.154348316215889,2.18559560503957,0,0.735444965261716,0.707029641304878,3.14093547383912,0,5.0718687310008,0,0.563903507879121,0.580120991762195,0,0,0,0,1.46067277649303,0,0.430018749454354,0.788857810965923,0,2.61810414204226,4.7612415646386,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,1.59135266258303,2.14371304124943,0.829169439458779,0.20686599172379,0.639701945702943,8.33225510123091,0,0.744896571550295,0,0.25458863311266,3.43599221228973,1.08858373948481,25.6674975813961,0.0673520530145875,0.358611026963382,8.31650891365033,1.05824249194267,0,0,2.78458126530419,46.9281884806909,0.733448665097199,4.06896178315738,1.99727032255654,0.603821380773079,0 | ||
|short_description=p33@IGF2 | |||
}} | }} |
Latest revision as of 08:21, 17 September 2015
Short description: | p33@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 410bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.39e-15 | 19 |
chorionic membrane mesenchymal stem cell | 5.61e-07 | 3 |
placental epithelial cell | 7.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.39e-22 | 14 |
membranous layer | 7.39e-22 | 14 |
extraembryonic structure | 2.31e-15 | 24 |
chorion | 7.79e-14 | 7 |
amnion | 7.26e-10 | 7 |
placenta | 1.61e-08 | 4 |
allantois | 1.61e-08 | 4 |
somatic layer of lateral plate mesoderm | 1.68e-08 | 8 |
endoderm-derived structure | 3.60e-08 | 160 |
endoderm | 3.60e-08 | 160 |
presumptive endoderm | 3.60e-08 | 160 |
intestine | 9.06e-08 | 17 |
egg chorion | 5.61e-07 | 3 |
gastrointestinal system | 5.73e-07 | 25 |
renal system | 7.48e-07 | 48 |
organ component layer | 8.86e-07 | 66 |
subdivision of digestive tract | 9.46e-07 | 118 |