FFCP PHASE1:Hg19::chr14:24729174..24729183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |EntrezGene=7051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |HGNC=11777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=180bp_to_ENST00000559136_5end | |association_with_transcript=180bp_to_ENST00000559136_5end | ||
|cluster_id=chr14:24729174..24729183,- | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_17_at_TGM1_5end | |description=CAGE_peak_17_at_TGM1_5end | ||
|id=chr14:24729174..24729183,- | |id=chr14:24729174..24729183,- | ||
|ontology_enrichment_celltype=CL:0000349!4.60e-24!3;CL:0002577!4.60e-24!3;CL:0002536!6.29e-16!2;CL:0002537!1.55e-14!5;CL:0002623!1.03e-10!3;CL:0000622!9.18e-07!5 | |ontology_enrichment_celltype=CL:0000349!4.60e-24!3;CL:0002577!4.60e-24!3;CL:0002536!6.29e-16!2;CL:0002537!1.55e-14!5;CL:0002623!1.03e-10!3;CL:0000622!9.18e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002577;7.95e-99;3!CL:0000349;1.32e-43;19!CL:0002537;3.11e-27;5!CL:0002188;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.95e-99,3;CL:0000349,1.21e-43,19;CL:0002537,2.72e-27,5;CL:0002188,7.49e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!1.13e-08!1;DOID:326!1.13e-08!1;DOID:3978!1.13e-08!1;DOID:3394!1.13e-08!1;DOID:5844!1.13e-08!1 | |ontology_enrichment_disease=DOID:178!1.13e-08!1;DOID:326!1.13e-08!1;DOID:3978!1.13e-08!1;DOID:3394!1.13e-08!1;DOID:5844!1.13e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.25e-43!14;UBERON:0000158!8.25e-43!14;UBERON:0000305!4.32e-27!7;UBERON:0000478!2.02e-24!24;UBERON:0004871!1.07e-23!8;UBERON:0001987!3.35e-18!4;UBERON:0004340!3.35e-18!4;UBERON:0003124!7.30e-18!7;UBERON:0001044!1.19e-11!6;UBERON:0003293!1.19e-11!6;UBERON:0003294!1.19e-11!6;UBERON:0010047!1.19e-11!6;UBERON:0000167!1.19e-11!6;UBERON:0004923!1.78e-09!57;UBERON:0001301!8.36e-09!1;UBERON:0003408!3.49e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.01e-74;4!UBERON:0000478;1.12e-34;24!UBERON:0000305;8.62e-20;7!UBERON:0005631;3.47e-14;10!UBERON:0000158;3.47e-14;10!UBERON:0000077;8.31e-12;27!UBERON:0000474;3.49e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.01e-74,4;UBERON:0004340,2.01e-74,4;UBERON:0005631,6.06e-59,14;UBERON:0000158,6.06e-59,14;UBERON:0003124,5.22e-43,7;UBERON:0000478,1.05e-34,24;UBERON:0000305,7.84e-20,7;UBERON:0004871,1.71e-17,8;UBERON:0000995,5.94e-15,21;UBERON:0005795,2.61e-14,22;UBERON:0003975,2.61e-14,22;UBERON:0004923,5.41e-13,66;UBERON:0004175,1.09e-12,25;UBERON:0006554,8.15e-12,47;UBERON:0001008,1.40e-11,48;UBERON:0000077,4.80e-11,29;UBERON:0003134,8.17e-09,37;UBERON:0000474,8.17e-09,37;UBERON:0003100,5.06e-08,41;UBERON:0003133,6.00e-07,48 | |||
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|short_description=p17@TGM1 | |short_description=p17@TGM1 | ||
}} | }} |
Latest revision as of 14:10, 19 September 2015
Short description: | p17@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TGM1_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 180bp_to_ENST00000559136_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.95e-99 | 3 |
extraembryonic cell | 1.21e-43 | 19 |
amnion mesenchymal stem cell | 2.72e-27 | 5 |
glomerular endothelial cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.01e-74 | 4 |
allantois | 2.01e-74 | 4 |
extraembryonic membrane | 6.06e-59 | 14 |
membranous layer | 6.06e-59 | 14 |
chorion | 5.22e-43 | 7 |
extraembryonic structure | 1.05e-34 | 24 |
amnion | 7.84e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.71e-17 | 8 |
uterus | 5.94e-15 | 21 |
embryonic uterus | 2.61e-14 | 22 |
internal female genitalia | 2.61e-14 | 22 |
organ component layer | 5.41e-13 | 66 |
internal genitalia | 1.09e-12 | 25 |
urinary system structure | 8.15e-12 | 47 |
renal system | 1.40e-11 | 48 |
mixed endoderm/mesoderm-derived structure | 4.80e-11 | 29 |
female reproductive organ | 8.17e-09 | 37 |
female reproductive system | 8.17e-09 | 37 |
female organism | 5.06e-08 | 41 |
reproductive organ | 6.00e-07 | 48 |