FFCP PHASE1:Hg19::chr11:114430588..114430608,-: Difference between revisions
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|id=chr11:114430588..114430608,-
|short_description=p1@FAM55A
|description=CAGE_peak_1_at_FAM55A_5end
|association_with_transcript=-8bp_to_,8bp_to_ENST00000251921,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120400 | |EntrezGene=120400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28527 | |HGNC=28527 | ||
|UniProt=F5H259, | |TSSclassifier=strong | ||
|UniProt=F5H259,Q8N323 | |||
|association_with_transcript=-8bp_to_,8bp_to_ENST00000251921,ENST00000534921,NM_152315,uc001ppa.2_5end | |||
|cluster_id=chr11:114430588..114430608,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_1_at_FAM55A_5end | |||
|id=chr11:114430588..114430608,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.46e-13;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.61e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.13e-36!11;UBERON:0000160!2.19e-31!27;UBERON:0005409!3.46e-24!35;UBERON:0004907!7.30e-21!5;UBERON:0001155!1.45e-20!9;UBERON:0001154!9.92e-13!1;UBERON:0001153!9.92e-13!1;UBERON:0001052!3.45e-12!4;UBERON:0001046!1.30e-09!19;UBERON:0004921!2.85e-07!129;UBERON:0004185!2.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.90e-67;17!UBERON:0000059;1.91e-56;11!UBERON:0005409;1.74e-52;22!UBERON:0001155;1.45e-44;9!UBERON:0004921;4.02e-33;33!UBERON:0001154;4.61e-26;1!UBERON:0001153;4.61e-26;1!UBERON:0009854;4.61e-26;1!UBERON:0004907;8.98e-21;5!UBERON:0002108;1.41e-20;4!UBERON:0001555;6.05e-14;54!UBERON:0001007;2.20e-10;81!UBERON:0002114;1.74e-09;2!UBERON:0009856;1.59e-07;4!UBERON:0001052;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.20e-67,17;UBERON:0000059,1.91e-56,11;UBERON:0005409,1.87e-46,25;UBERON:0001155,1.45e-44,9;UBERON:0001154,4.61e-26,1;UBERON:0001153,4.61e-26,1;UBERON:0001045,4.61e-26,1;UBERON:0004907,8.98e-21,5;UBERON:0002108,1.48e-20,4;UBERON:0004921,3.10e-10,118;UBERON:0002114,1.81e-09,2;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0001052,1.69e-07,4;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p1@FAM55A | |||
}} | }} |
Latest revision as of 07:31, 25 September 2015
Short description: | p1@FAM55A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM55A_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -8bp_to_, 8bp_to_ENST00000251921, ENST00000534921, NM_152315, uc001ppa.2_5end |
EntrezGene: | FAM55A |
HGNC: | 28527 |
UniProt: | F5H259Q8N323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.20e-67 | 17 |
large intestine | 1.91e-56 | 11 |
gastrointestinal system | 1.87e-46 | 25 |
colon | 1.45e-44 | 9 |
vermiform appendix | 4.61e-26 | 1 |
caecum | 4.61e-26 | 1 |
midgut | 4.61e-26 | 1 |
lower digestive tract | 8.98e-21 | 5 |
small intestine | 1.48e-20 | 4 |
subdivision of digestive tract | 3.10e-10 | 118 |
duodenum | 1.81e-09 | 2 |
digestive system | 2.49e-08 | 145 |
digestive tract | 2.49e-08 | 145 |
primitive gut | 2.49e-08 | 145 |
endoderm-derived structure | 1.52e-07 | 160 |
endoderm | 1.52e-07 | 160 |
presumptive endoderm | 1.52e-07 | 160 |
rectum | 1.69e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |