FFCP PHASE1:Hg19::chr12:52885355..52885376,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000549754_5end | |association_with_transcript=32bp_to_ENST00000549754_5end | ||
|cluster_id=chr12:52885355..52885376,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_2_at_KRT6A_5end | |description=CAGE_peak_2_at_KRT6A_5end | ||
|id=chr12:52885355..52885376,- | |id=chr12:52885355..52885376,- | ||
|ontology_enrichment_celltype=CL:0002076!2.30e-30!43;CL:0002368!2.22e-22!13;CL:0000223!6.92e-22!59;CL:0000066!1.81e-21!254;CL:0002159!1.11e-18!13;CL:0002251!4.07e-14!21;CL:0002202!8.52e-14!9;CL:0002632!8.52e-14!9;CL:0000622!7.50e-13!5;CL:0000154!1.23e-10!6;CL:0000244!1.37e-10!4;CL:0000731!1.37e-10!4;CL:0002328!3.34e-09!3;CL:0000068!7.72e-09!3;CL:0000069!7.72e-09!3;CL:0000307!7.72e-09!3;CL:0000377!7.72e-09!3;CL:0000349!8.35e-09!3;CL:0002577!8.35e-09!3;CL:0002077!9.07e-09!33;CL:0002541!2.19e-08!3;CL:0002621!2.55e-08!3;CL:0000362!2.68e-08!8;CL:0002166!3.03e-08!3;CL:0000076!3.51e-08!62;CL:0002623!4.84e-08!3;CL:0000240!3.37e-07!6;CL:0000311!3.37e-07!6;CL:0000079!3.37e-07!6;CL:0000237!3.37e-07!6;CL:0000036!3.37e-07!6;CL:0000357!3.37e-07!6;CL:0000114!3.37e-07!6;CL:0000150!6.08e-07!9 | |ontology_enrichment_celltype=CL:0002076!2.30e-30!43;CL:0002368!2.22e-22!13;CL:0000223!6.92e-22!59;CL:0000066!1.81e-21!254;CL:0002159!1.11e-18!13;CL:0002251!4.07e-14!21;CL:0002202!8.52e-14!9;CL:0002632!8.52e-14!9;CL:0000622!7.50e-13!5;CL:0000154!1.23e-10!6;CL:0000244!1.37e-10!4;CL:0000731!1.37e-10!4;CL:0002328!3.34e-09!3;CL:0000068!7.72e-09!3;CL:0000069!7.72e-09!3;CL:0000307!7.72e-09!3;CL:0000377!7.72e-09!3;CL:0000349!8.35e-09!3;CL:0002577!8.35e-09!3;CL:0002077!9.07e-09!33;CL:0002541!2.19e-08!3;CL:0002621!2.55e-08!3;CL:0000362!2.68e-08!8;CL:0002166!3.03e-08!3;CL:0000076!3.51e-08!62;CL:0002623!4.84e-08!3;CL:0000240!3.37e-07!6;CL:0000311!3.37e-07!6;CL:0000079!3.37e-07!6;CL:0000237!3.37e-07!6;CL:0000036!3.37e-07!6;CL:0000357!3.37e-07!6;CL:0000114!3.37e-07!6;CL:0000150!6.08e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.32e-24;13!CL:0002076;3.20e-23;42!CL:0002159;1.58e-22;14!CL:0000622;2.52e-16;5!CL:0002202;9.04e-14;9!CL:0002632;9.04e-14;9!CL:0000154;1.48e-13;6!CL:0000244;2.18e-13;4!CL:0000731;2.18e-13;4!CL:0000349;5.16e-13;19!CL:0002328;1.33e-11;3!CL:0002251;1.89e-11;20!CL:0000307;3.60e-11;3!CL:0002577;4.42e-11;3!CL:0002621;1.94e-10;3!CL:0002166;2.14e-10;3!CL:0002077;3.69e-10;34!CL:0002623;4.73e-10;3!CL:0000362;1.92e-09;9!CL:0000240;3.72e-09;6!CL:0000311;3.72e-09;6!CL:0000079;3.72e-09;6!CL:0000237;3.72e-09;6!CL:0000150;6.25e-09;9!CL:0000575;3.68e-08;2!CL:0000317;5.48e-08;2!CL:1000448;5.48e-08;2!CL:0002308;5.48e-08;2!CL:0002140;5.48e-08;2!CL:0002327;5.81e-08;4!CL:0002536;4.00e-07;2!CL:0000312;9.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.47e-30,42;CL:0002368,1.33e-24,13;CL:0002159,1.58e-22,14;CL:0000223,3.94e-20,58;CL:0000066,4.51e-18,253;CL:0000622,2.14e-16,5;CL:0002202,9.67e-14,9;CL:0002632,9.67e-14,9;CL:0000154,1.29e-13,6;CL:0000244,2.01e-13,4;CL:0000731,2.01e-13,4;CL:0000349,5.05e-13,19;CL:0002077,1.15e-11,34;CL:0002328,1.33e-11,3;CL:0002251,1.83e-11,20;CL:0000068,3.99e-11,3;CL:0000069,3.99e-11,3;CL:0000307,3.99e-11,3;CL:0000377,3.99e-11,3;CL:0002577,4.42e-11,3;CL:0002621,1.91e-10,3;CL:0002166,2.40e-10,3;CL:0002623,4.43e-10,3;CL:0000362,1.79e-09,9;CL:0000240,3.53e-09,6;CL:0000311,3.53e-09,6;CL:0000079,3.53e-09,6;CL:0000237,3.53e-09,6;CL:0000036,3.53e-09,6;CL:0000357,3.53e-09,6;CL:0000114,3.53e-09,6;CL:0000150,5.73e-09,9;CL:0000575,3.75e-08,2;CL:0000317,4.94e-08,2;CL:1000448,4.94e-08,2;CL:0002308,4.94e-08,2;CL:0002140,4.94e-08,2;CL:0002327,5.60e-08,4;CL:0002536,3.87e-07,2;CL:0000312,9.29e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;3.60e-11;3!CL:0000223;4.07e-11;58!CL:0000357;3.72e-09;6!CL:0000114;3.72e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!1.51e-11!14 | |ontology_enrichment_disease=DOID:1749!1.51e-11!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.16e-20!14;UBERON:0000158!3.16e-20!14;UBERON:0003124!2.47e-17!7;UBERON:0001004!5.88e-15!72;UBERON:0004119!1.26e-14!169;UBERON:0000925!1.26e-14!169;UBERON:0006595!1.26e-14!169;UBERON:0000166!2.87e-14!21;UBERON:0007196!2.52e-13!14;UBERON:0001558!2.52e-13!14;UBERON:0000365!2.62e-12!5;UBERON:0000161!2.65e-12!35;UBERON:0000165!7.53e-12!28;UBERON:0000930!7.53e-12!28;UBERON:0000478!1.05e-10!24;UBERON:0001987!1.21e-10!4;UBERON:0004340!1.21e-10!4;UBERON:0004923!1.55e-10!57;UBERON:0005910!3.43e-10!6;UBERON:0003102!6.37e-10!95;UBERON:0004815!3.34e-09!3;UBERON:0002031!3.34e-09!3;UBERON:0003126!7.46e-09!7;UBERON:0001005!7.46e-09!7;UBERON:0000476!2.19e-08!3;UBERON:0000920!2.19e-08!3;UBERON:0000344!2.33e-08!12;UBERON:0000065!2.41e-08!53;UBERON:0001949!2.55e-08!3;UBERON:0001444!4.78e-08!48;UBERON:0003729!1.10e-07!5;UBERON:0000064!4.76e-07!219;UBERON:0002185!5.78e-07!4;UBERON:0000077!6.66e-07!130;UBERON:0005178!7.89e-07!34;UBERON:0002224!7.89e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.82e-12;12!UBERON:0005631;8.71e-12;10!UBERON:0000158;8.71e-12;10!UBERON:0004815;1.33e-11;3!UBERON:0002031;1.33e-11;3!UBERON:0000165;1.41e-11;28!UBERON:0000365;1.01e-10;5!UBERON:0001949;1.94e-10;3!UBERON:0007196;2.00e-10;15!UBERON:0001558;2.00e-10;15!UBERON:0000478;6.16e-10;24!UBERON:0000161;2.10e-09;19!UBERON:0000166;2.10e-09;19!UBERON:0005910;6.08e-09;6!UBERON:0001987;2.09e-08;4!UBERON:0002419;5.48e-08;2!UBERON:0007771;5.48e-08;2!UBERON:0003297;5.48e-08;2!UBERON:0001821;5.48e-08;2!UBERON:0003487;5.48e-08;2!UBERON:0001820;5.48e-08;2!UBERON:0001911;5.81e-08;4!UBERON:0001708;6.71e-08;4!UBERON:0008895;6.71e-08;4!UBERON:0000305;7.09e-08;7!UBERON:0003126;7.29e-08;7!UBERON:0001005;7.29e-08;7!UBERON:0001003;1.51e-07;15!UBERON:0007376;1.51e-07;15!UBERON:0002185;4.27e-07;5!UBERON:0010371;4.52e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.58e-18,14;UBERON:0000158,2.58e-18,14;UBERON:0003102,2.03e-14,99;UBERON:0001004,2.77e-14,74;UBERON:0004119,4.04e-14,160;UBERON:0000925,4.04e-14,160;UBERON:0006595,4.04e-14,160;UBERON:0000166,1.10e-12,22;UBERON:0003124,2.27e-12,7;UBERON:0004815,1.33e-11,3;UBERON:0002031,1.33e-11,3;UBERON:0000165,4.24e-11,29;UBERON:0000930,4.24e-11,29;UBERON:0000033,5.50e-11,56;UBERON:0000153,6.64e-11,62;UBERON:0007811,6.64e-11,62;UBERON:0000365,9.43e-11,5;UBERON:0000161,1.57e-10,36;UBERON:0001949,1.91e-10,3;UBERON:0007196,2.17e-10,15;UBERON:0001558,2.17e-10,15;UBERON:0000478,6.06e-10,24;UBERON:0005910,5.76e-09,6;UBERON:0000065,6.31e-09,54;UBERON:0001987,2.09e-08,4;UBERON:0004340,2.09e-08,4;UBERON:0001444,2.56e-08,49;UBERON:0002419,4.94e-08,2;UBERON:0007771,4.94e-08,2;UBERON:0003297,4.94e-08,2;UBERON:0001821,4.94e-08,2;UBERON:0003487,4.94e-08,2;UBERON:0001820,4.94e-08,2;UBERON:0005089,4.94e-08,2;UBERON:0005088,4.94e-08,2;UBERON:0001911,5.60e-08,4;UBERON:0005333,5.60e-08,4;UBERON:0008425,5.60e-08,4;UBERON:0005311,5.60e-08,4;UBERON:0000305,7.09e-08,7;UBERON:0001708,7.30e-08,4;UBERON:0008895,7.30e-08,4;UBERON:0003126,8.06e-08,7;UBERON:0001005,8.06e-08,7;UBERON:0004923,9.21e-08,66;UBERON:0001003,1.45e-07,15;UBERON:0007376,1.45e-07,15;UBERON:0007383,1.45e-07,15;UBERON:0002185,4.27e-07,5;UBERON:0004871,6.88e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,3.9319446983431,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1797428567625,20.7832083956993,15.8994224371719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,10.2002680721912,27.4380487660478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1881382942715,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50347753918506,8.18238361772504,2.58124135850103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4502953799715,7.86812272803337,10.4550131308096,3.88871469665824,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,6.04735661515894,7.93940544557364,3.04498977189684,6.97521452433509,14.568541808278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5501234294205,14.9791895559447,9.97887967987945,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0582440848778,23.941057123333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89118645595407,29.90277131768,0,0,0,0,0,0,0,0,0,18.0160557743466,6.53446229041361,1.91419068741876,6.67641353646629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50532479258994,22.7902773682168,14.1558280319719,0,6.45758059006845,6.73885902670502,20.8412172162238,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.770770172179,0,24.8800168700378,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0,0,0,0,0,0,0,0,0,0,0,3.76444109552229,4.84786628573922,0,0,0,0,14.9930545074002,0.457987967009312,17.0571128325963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0,0,0,0,0,0,6.20729705525884,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03152031398899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,6.71421637053334,4.97661808026378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0.353909170043221,4.58571496304198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45051314914126,8.36520537760355,3.45629830907046,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,50.945719007889,5.81796611844978,1.01028079521881,1.07583308089015,0.332660356546013,0.162806537221949,0,0,0,0,0,11.7999891711564,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,3.9319446983431,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1797428567625,20.7832083956993,15.8994224371719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,10.2002680721912,27.4380487660478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1881382942715,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50347753918506,8.18238361772504,2.58124135850103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4502953799715,7.86812272803337,10.4550131308096,3.88871469665824,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,6.04735661515894,7.93940544557364,3.04498977189684,6.97521452433509,14.568541808278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5501234294205,14.9791895559447,9.97887967987945,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0582440848778,23.941057123333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89118645595407,29.90277131768,0,0,0,0,0,0,0,0,0,18.0160557743466,6.53446229041361,1.91419068741876,6.67641353646629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50532479258994,22.7902773682168,14.1558280319719,0,6.45758059006845,6.73885902670502,20.8412172162238,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.770770172179,0,24.8800168700378,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0,0,0,0,0,0,0,0,0,0,0,3.76444109552229,4.84786628573922,0,0,0,0,14.9930545074002,0.457987967009312,17.0571128325963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0,0,0,0,0,0,6.20729705525884,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03152031398899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,6.71421637053334,4.97661808026378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0.353909170043221,4.58571496304198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45051314914126,8.36520537760355,3.45629830907046,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,50.945719007889,5.81796611844978,1.01028079521881,1.07583308089015,0.332660356546013,0.162806537221949,0,0,0,0,0,11.7999891711564,0,0,0 | ||
|short_description=p2@KRT6A | |short_description=p2@KRT6A | ||
}} | }} |
Latest revision as of 22:51, 18 September 2015
Short description: | p2@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT6A_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | 32bp_to_ENST00000549754_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data