FFCP PHASE1:Hg19::chr12:3842242..3842262,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84766 | |EntrezGene=84766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28657 | |HGNC=28657 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSW2 | |UniProt=Q9BSW2 | ||
|association_with_transcript=-49bp_to_BC150643_5end | |association_with_transcript=-49bp_to_BC150643_5end | ||
|cluster_id=chr12:3842242..3842262,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_9_at_EFCAB4B_5end | |description=CAGE_peak_9_at_EFCAB4B_5end | ||
|id=chr12:3842242..3842262,- | |id=chr12:3842242..3842262,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.59e-23;1 | |||
|ontology_enrichment_disease=DOID:0050619!6.60e-07!1;DOID:1357!6.60e-07!1 | |ontology_enrichment_disease=DOID:0050619!6.60e-07!1;DOID:1357!6.60e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.27e-12!2;UBERON:0000160!2.86e-09!27;UBERON:0005409!4.63e-09!35;UBERON:0000059!1.30e-08!11;UBERON:0001723!2.20e-08!3;UBERON:0001033!2.20e-08!3;UBERON:0010056!2.20e-08!3;UBERON:0004921!1.11e-07!129;UBERON:0004185!1.11e-07!129;UBERON:0000078!1.49e-07!18;UBERON:0001736!4.18e-07!1;UBERON:0006298!4.18e-07!1;UBERON:0001764!6.60e-07!1;UBERON:0001825!6.60e-07!1;UBERON:0002372!8.27e-07!1;UBERON:0001961!8.27e-07!1;UBERON:0001744!8.27e-07!1;UBERON:0001735!8.27e-07!1;UBERON:0004119!8.34e-07!169;UBERON:0000925!8.34e-07!169;UBERON:0006595!8.34e-07!169;UBERON:0001007!8.76e-07!155;UBERON:0001555!8.76e-07!155;UBERON:0007026!8.76e-07!155 | |ontology_enrichment_uberon=UBERON:0003127!2.27e-12!2;UBERON:0000160!2.86e-09!27;UBERON:0005409!4.63e-09!35;UBERON:0000059!1.30e-08!11;UBERON:0001723!2.20e-08!3;UBERON:0001033!2.20e-08!3;UBERON:0010056!2.20e-08!3;UBERON:0004921!1.11e-07!129;UBERON:0004185!1.11e-07!129;UBERON:0000078!1.49e-07!18;UBERON:0001736!4.18e-07!1;UBERON:0006298!4.18e-07!1;UBERON:0001764!6.60e-07!1;UBERON:0001825!6.60e-07!1;UBERON:0002372!8.27e-07!1;UBERON:0001961!8.27e-07!1;UBERON:0001744!8.27e-07!1;UBERON:0001735!8.27e-07!1;UBERON:0004119!8.34e-07!169;UBERON:0000925!8.34e-07!169;UBERON:0006595!8.34e-07!169;UBERON:0001007!8.76e-07!155;UBERON:0001555!8.76e-07!155;UBERON:0007026!8.76e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.93e-44;17!UBERON:0002108;3.11e-40;4!UBERON:0005409;1.61e-34;22!UBERON:0004921;1.53e-27;33!UBERON:0001736;4.59e-23;1!UBERON:0001155;8.06e-23;9!UBERON:0000059;8.15e-19;11!UBERON:0003127;3.06e-12;2!UBERON:0001829;3.06e-12;2!UBERON:0001555;1.12e-10;54!UBERON:0002114;1.00e-08;2!UBERON:0000922;2.62e-08;49!UBERON:0001007;3.50e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.41e-44,17;UBERON:0002108,2.55e-40,4;UBERON:0005409,1.35e-30,25;UBERON:0001736,4.10e-23,1;UBERON:0006298,4.10e-23,1;UBERON:0001155,8.06e-23,9;UBERON:0000059,8.15e-19,11;UBERON:0001829,2.90e-12,2;UBERON:0003127,3.24e-12,2;UBERON:0004921,1.12e-11,118;UBERON:0001007,1.80e-09,145;UBERON:0001555,1.80e-09,145;UBERON:0007026,1.80e-09,145;UBERON:0002114,9.66e-09,2;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0011216,1.33e-07,223 | |||
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|short_description=p9@EFCAB4B | |short_description=p9@EFCAB4B | ||
}} | }} |
Latest revision as of 05:51, 18 September 2015
Short description: | p9@EFCAB4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EFCAB4B_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -49bp_to_BC150643_5end |
EntrezGene: | EFCAB4B |
HGNC: | 28657 |
UniProt: | Q9BSW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.41e-44 | 17 |
small intestine | 2.55e-40 | 4 |
gastrointestinal system | 1.35e-30 | 25 |
submandibular gland | 4.10e-23 | 1 |
submandibular gland primordium | 4.10e-23 | 1 |
colon | 8.06e-23 | 9 |
large intestine | 8.15e-19 | 11 |
major salivary gland | 2.90e-12 | 2 |
open tracheal system trachea | 3.24e-12 | 2 |
subdivision of digestive tract | 1.12e-11 | 118 |
digestive system | 1.80e-09 | 145 |
digestive tract | 1.80e-09 | 145 |
primitive gut | 1.80e-09 | 145 |
duodenum | 9.66e-09 | 2 |
endoderm-derived structure | 1.47e-08 | 160 |
endoderm | 1.47e-08 | 160 |
presumptive endoderm | 1.47e-08 | 160 |
organ system subdivision | 1.33e-07 | 223 |