FFCP PHASE1:Hg19::chr12:32552770..32552839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |EntrezGene=121512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |HGNC=19125 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000550091_5end | |association_with_transcript=0bp_to_ENST00000550091_5end | ||
|cluster_id=chr12:32552770..32552839,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_4_at_FGD4_5end | |description=CAGE_peak_4_at_FGD4_5end | ||
|id=chr12:32552770..32552839,+ | |id=chr12:32552770..32552839,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-52!254;CL:0000223!2.62e-15!59;CL:0002076!2.64e-14!43;CL:0000076!4.63e-10!62;CL:0002251!2.17e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.11e-52!254;CL:0000223!2.62e-15!59;CL:0002076!2.64e-14!43;CL:0000076!4.63e-10!62;CL:0002251!2.17e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.23e-13;42!CL:0002251;7.38e-09;20!CL:1000497;1.07e-08;17!CL:0002518;1.07e-08;17!CL:0002368;1.16e-07;13!CL:0000039;1.48e-07;7!CL:0000586;1.48e-07;7!CL:1000449;1.51e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.30e-49,253;CL:0002076,3.35e-17,42;CL:0000223,2.07e-16,58;CL:0002251,7.12e-09,20;CL:1000497,1.80e-08,17;CL:0002518,1.80e-08,17;CL:0000076,7.34e-08,63;CL:0002368,1.02e-07,13;CL:0000039,1.48e-07,7;CL:0000586,1.48e-07,7;CL:1000449,2.47e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;1.79e-08;58 | |||
|ontology_enrichment_disease=DOID:305!4.47e-29!106;DOID:0050687!1.58e-21!143;DOID:162!3.57e-12!235;DOID:14566!6.26e-11!239;DOID:299!9.82e-11!25;DOID:1749!4.14e-09!14 | |ontology_enrichment_disease=DOID:305!4.47e-29!106;DOID:0050687!1.58e-21!143;DOID:162!3.57e-12!235;DOID:14566!6.26e-11!239;DOID:299!9.82e-11!25;DOID:1749!4.14e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.84e-11;14!DOID:299;2.20e-10;25!DOID:305;5.74e-10;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.25e-30,106;DOID:0050687,1.43e-22,143;DOID:1749,2.36e-11,14;DOID:162,1.29e-10,235;DOID:299,1.88e-10,25;DOID:14566,8.55e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.38e-16!169;UBERON:0000925!2.38e-16!169;UBERON:0006595!2.38e-16!169;UBERON:0001007!2.01e-13!155;UBERON:0001555!2.01e-13!155;UBERON:0007026!2.01e-13!155;UBERON:0000466!3.23e-13!126;UBERON:0004921!7.86e-13!129;UBERON:0004185!7.86e-13!129;UBERON:0000464!1.11e-12!104;UBERON:0005177!1.18e-11!107;UBERON:0000077!4.67e-11!130;UBERON:0001004!5.79e-11!72;UBERON:0001041!1.69e-09!98;UBERON:0009569!5.73e-09!113;UBERON:0005911!6.86e-09!82;UBERON:0000065!3.17e-08!53;UBERON:0000489!3.72e-08!32;UBERON:0006554!3.87e-08!44;UBERON:0002113!4.80e-08!27;UBERON:0003918!4.80e-08!27;UBERON:0005095!4.80e-08!27;UBERON:0007687!4.80e-08!27;UBERON:0000064!5.16e-08!219;UBERON:0001008!1.21e-07!45;UBERON:0002553!2.23e-07!70;UBERON:0005153!3.72e-07!37;UBERON:0000058!6.83e-07!26;UBERON:0005181!6.84e-07!35;UBERON:0005172!7.37e-07!55;UBERON:0005173!7.37e-07!55;UBERON:0008947!9.17e-07!38;UBERON:0003258!9.17e-07!38 | |ontology_enrichment_uberon=UBERON:0004119!2.38e-16!169;UBERON:0000925!2.38e-16!169;UBERON:0006595!2.38e-16!169;UBERON:0001007!2.01e-13!155;UBERON:0001555!2.01e-13!155;UBERON:0007026!2.01e-13!155;UBERON:0000466!3.23e-13!126;UBERON:0004921!7.86e-13!129;UBERON:0004185!7.86e-13!129;UBERON:0000464!1.11e-12!104;UBERON:0005177!1.18e-11!107;UBERON:0000077!4.67e-11!130;UBERON:0001004!5.79e-11!72;UBERON:0001041!1.69e-09!98;UBERON:0009569!5.73e-09!113;UBERON:0005911!6.86e-09!82;UBERON:0000065!3.17e-08!53;UBERON:0000489!3.72e-08!32;UBERON:0006554!3.87e-08!44;UBERON:0002113!4.80e-08!27;UBERON:0003918!4.80e-08!27;UBERON:0005095!4.80e-08!27;UBERON:0007687!4.80e-08!27;UBERON:0000064!5.16e-08!219;UBERON:0001008!1.21e-07!45;UBERON:0002553!2.23e-07!70;UBERON:0005153!3.72e-07!37;UBERON:0000058!6.83e-07!26;UBERON:0005181!6.84e-07!35;UBERON:0005172!7.37e-07!55;UBERON:0005173!7.37e-07!55;UBERON:0008947!9.17e-07!38;UBERON:0003258!9.17e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.12e-11;30!UBERON:0001008;3.12e-11;30!UBERON:0002113;1.42e-09;24!UBERON:0011143;1.42e-09;24!UBERON:0000489;1.60e-09;29!UBERON:0004921;4.15e-09;33!UBERON:0004807;1.01e-07;22!UBERON:0006555;1.51e-07;15!UBERON:0004819;1.51e-07;15!UBERON:0001285;1.51e-07;15!UBERON:0007684;1.51e-07;15!UBERON:0002048;2.76e-07;22!UBERON:0000117;2.76e-07;22!UBERON:0000171;2.76e-07;22!UBERON:0000170;2.76e-07;22!UBERON:0005181;3.58e-07;35!UBERON:0005178;6.67e-07;34!UBERON:0002224;6.67e-07;34!UBERON:0001851;8.67e-07;15 | |||
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| ||
|short_description=p4@FGD4 | |short_description=p4@FGD4 | ||
}} | }} |
Latest revision as of 04:59, 18 September 2015
Short description: | p4@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FGD4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000550091_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.30e-49 | 253 |
endo-epithelial cell | 3.35e-17 | 42 |
endodermal cell | 2.07e-16 | 58 |
epithelial cell of alimentary canal | 7.12e-09 | 20 |
kidney cell | 1.80e-08 | 17 |
kidney epithelial cell | 1.80e-08 | 17 |
squamous epithelial cell | 7.34e-08 | 63 |
respiratory epithelial cell | 1.02e-07 | 13 |
germ line cell | 1.48e-07 | 7 |
germ cell | 1.48e-07 | 7 |
epithelial cell of nephron | 2.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.25e-30 | 106 |
cell type cancer | 1.43e-22 | 143 |
squamous cell carcinoma | 2.36e-11 | 14 |
cancer | 1.29e-10 | 235 |
adenocarcinoma | 1.88e-10 | 25 |
disease of cellular proliferation | 8.55e-10 | 239 |