FFCP PHASE1:Hg19::chr17:45331184..45331200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3690 | |EntrezGene=3690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6156 | |HGNC=6156 | ||
|TSSclassifier=strong | |||
|UniProt=P05106,Q2YFE1 | |UniProt=P05106,Q2YFE1 | ||
|association_with_transcript=-7bp_to_ENST00000262017,NM_000212,uc002ili.1,uc002ilj.2,uc010wkr.1_5end | |association_with_transcript=-7bp_to_ENST00000262017,NM_000212,uc002ili.1,uc002ilj.2,uc010wkr.1_5end | ||
|cluster_id=chr17:45331184..45331200,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_ITGB3_5end | |description=CAGE_peak_1_at_ITGB3_5end | ||
|id=chr17:45331184..45331200,+ | |id=chr17:45331184..45331200,+ | ||
|ontology_enrichment_celltype=CL:0000222!6.18e-18!119;CL:0002139!3.79e-12!24;CL:0002078!4.07e-12!44;CL:0000115!1.24e-11!35;CL:0000071!1.74e-10!18;CL:0002546!1.74e-10!18;CL:0000183!6.58e-10!59;CL:0000055!1.91e-09!180;CL:1000497!2.57e-09!18;CL:0002518!2.57e-09!18;CL:1000449!2.91e-09!16;CL:0000680!3.20e-09!57;CL:0000056!3.20e-09!57;CL:0000355!3.20e-09!57;CL:0000187!3.62e-09!54;CL:0000213!3.41e-08!57;CL:0000215!3.41e-08!57;CL:1000507!7.93e-08!12;CL:1000494!7.93e-08!12;CL:0000192!9.57e-08!42;CL:0000514!9.57e-08!42;CL:0002681!2.50e-07!13;CL:0002584!2.50e-07!13;CL:0000393!8.11e-07!60;CL:0000211!8.11e-07!60 | |ontology_enrichment_celltype=CL:0000222!6.18e-18!119;CL:0002139!3.79e-12!24;CL:0002078!4.07e-12!44;CL:0000115!1.24e-11!35;CL:0000071!1.74e-10!18;CL:0002546!1.74e-10!18;CL:0000183!6.58e-10!59;CL:0000055!1.91e-09!180;CL:1000497!2.57e-09!18;CL:0002518!2.57e-09!18;CL:1000449!2.91e-09!16;CL:0000680!3.20e-09!57;CL:0000056!3.20e-09!57;CL:0000355!3.20e-09!57;CL:0000187!3.62e-09!54;CL:0000213!3.41e-08!57;CL:0000215!3.41e-08!57;CL:1000507!7.93e-08!12;CL:1000494!7.93e-08!12;CL:0000192!9.57e-08!42;CL:0000514!9.57e-08!42;CL:0002681!2.50e-07!13;CL:0002584!2.50e-07!13;CL:0000393!8.11e-07!60;CL:0000211!8.11e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.33e-13;24!CL:0000071;2.11e-11;18!CL:1000449;5.86e-11;15!CL:1000497;7.15e-11;17!CL:0002518;7.15e-11;17!CL:0000115;7.26e-11;36!CL:0002078;3.27e-09;45!CL:1000507;8.23e-09;10!CL:1000494;8.23e-09;10!CL:0002681;8.60e-09;12!CL:0002584;8.60e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.40e-16,121;CL:0002139,3.28e-13,24;CL:0002078,3.47e-13,45;CL:0000115,1.32e-12,36;CL:0000071,2.21e-11,18;CL:0002546,2.21e-11,18;CL:1000449,6.57e-11,15;CL:1000497,6.89e-11,17;CL:0002518,6.89e-11,17;CL:1000507,8.43e-09,10;CL:1000494,8.43e-09,10;CL:0002681,9.57e-09,12;CL:0002584,9.57e-09,12;CL:0000680,2.47e-08,58;CL:0000056,2.47e-08,58;CL:0000355,2.47e-08,58;CL:0000187,3.08e-08,55;CL:0000213,1.33e-07,58;CL:0000215,1.33e-07,58;CL:0000192,9.10e-07,43;CL:0000514,9.10e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;2.11e-11;18 | |||
|ontology_enrichment_disease=DOID:2394!2.82e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.66e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.47e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001009!1.38e-27!113;UBERON:0004535!3.01e-27!110;UBERON:0003914!3.17e-24!118;UBERON:0004872!3.31e-21!84;UBERON:0002049!1.00e-19!79;UBERON:0007798!1.00e-19!79;UBERON:0000055!9.14e-19!69;UBERON:0001981!9.11e-18!60;UBERON:0007500!9.11e-18!60;UBERON:0004537!9.11e-18!60;UBERON:0006965!9.11e-18!60;UBERON:0000490!2.24e-13!138;UBERON:0005256!4.60e-13!143;UBERON:0003081!2.02e-12!216;UBERON:0000119!1.65e-11!312;UBERON:0000483!3.60e-11!309;UBERON:0001637!9.76e-11!42;UBERON:0003509!9.76e-11!42;UBERON:0004572!9.76e-11!42;UBERON:0001986!1.74e-10!18;UBERON:0004638!1.74e-10!18;UBERON:0004852!1.74e-10!18;UBERON:0003887!3.44e-10!21;UBERON:0004290!7.14e-10!70;UBERON:0000025!1.02e-09!194;UBERON:0002385!1.07e-09!63;UBERON:0001015!1.07e-09!63;UBERON:0000383!1.07e-09!63;UBERON:0003103!1.36e-09!69;UBERON:0006555!2.35e-09!17;UBERON:0005103!2.35e-09!17;UBERON:0000083!2.35e-09!17;UBERON:0009201!2.35e-09!17;UBERON:0004819!2.35e-09!17;UBERON:0006553!2.35e-09!17;UBERON:0003074!2.35e-09!17;UBERON:0003060!2.35e-09!17;UBERON:0004211!2.91e-09!16;UBERON:0001285!2.91e-09!16;UBERON:0007684!2.91e-09!16;UBERON:0003220!2.91e-09!16;UBERON:0004208!2.91e-09!16;UBERON:0000487!3.08e-09!22;UBERON:0004111!3.26e-09!241;UBERON:0001134!3.28e-09!61;UBERON:0002036!3.28e-09!61;UBERON:0003082!3.28e-09!61;UBERON:0000080!3.47e-09!18;UBERON:0002120!3.47e-09!18;UBERON:0004875!3.47e-09!18;UBERON:0005721!3.47e-09!18;UBERON:0005754!3.47e-09!18;UBERON:0007297!3.47e-09!18;UBERON:0000353!4.02e-09!17;UBERON:0004876!4.13e-09!20;UBERON:0006914!9.86e-09!25;UBERON:0000914!1.05e-08!83;UBERON:0002329!1.05e-08!83;UBERON:0003077!1.05e-08!83;UBERON:0003059!1.05e-08!83;UBERON:0007282!1.05e-08!83;UBERON:0009618!1.05e-08!83;UBERON:0007285!1.05e-08!83;UBERON:0000477!1.14e-08!286;UBERON:0000486!2.77e-08!82;UBERON:0000926!6.13e-08!448;UBERON:0004120!6.13e-08!448;UBERON:0006603!6.13e-08!448;UBERON:0009773!7.93e-08!12;UBERON:0001231!7.93e-08!12;UBERON:0004810!7.93e-08!12;UBERON:0004573!2.44e-07!33;UBERON:0004571!2.44e-07!33;UBERON:0001225!2.50e-07!13;UBERON:0008987!2.50e-07!13;UBERON:0007100!3.51e-07!27;UBERON:0000948!6.12e-07!24;UBERON:0005498!6.12e-07!24;UBERON:0004140!6.12e-07!24;UBERON:0009881!6.12e-07!24;UBERON:0004141!6.12e-07!24;UBERON:0003084!6.12e-07!24;UBERON:0007005!6.12e-07!24;UBERON:0004139!6.12e-07!24;UBERON:0004291!6.12e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.11e-11;18!UBERON:0001986;2.11e-11;18!UBERON:0004852;2.11e-11;18!UBERON:0003914;2.16e-11;74!UBERON:0006555;5.86e-11;15!UBERON:0004819;5.86e-11;15!UBERON:0001285;5.86e-11;15!UBERON:0007684;5.86e-11;15!UBERON:0000353;1.42e-10;15!UBERON:0000487;2.93e-10;22!UBERON:0000055;3.28e-10;65!UBERON:0006914;6.94e-10;25!UBERON:0007500;8.72e-10;56!UBERON:0001981;8.72e-10;56!UBERON:0004537;8.72e-10;56!UBERON:0004211;8.23e-09;10!UBERON:0009773;8.23e-09;10!UBERON:0001231;8.23e-09;10!UBERON:0004810;8.23e-09;10!UBERON:0001225;8.60e-09;12!UBERON:0008987;8.60e-09;12!UBERON:0002049;2.39e-08;75!UBERON:0007798;2.39e-08;75!UBERON:0001637;2.84e-08;42!UBERON:0003509;2.84e-08;42!UBERON:0004572;2.84e-08;42!UBERON:0004535;2.87e-08;109!UBERON:0001009;9.75e-08;112!UBERON:0007100;1.76e-07;25!UBERON:0002113;3.15e-07;24!UBERON:0011143;3.15e-07;24!UBERON:0000948;3.65e-07;22!UBERON:0000490;5.11e-07;33!UBERON:0000489;6.93e-07;29 | |||
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|phase1_expression=2.18014055124668,1.2846031433459,0.704772020479856,1.0007329835313,0.446961094427288,0,5.06599756336621,6.94891860769514,5.22371256399677,31.6996778086946,4.18680700783456,1.09220686065086,2.11013582582763,0.123766352960047,0.331397375727916,2.6893005858071,4.21886169616784,0.730310090387373,8.29485757943862,2.33930010345897,5.10001728110633,2.19418305034661,2.86235987131057,2.32686522623903,1.75759695432724,2.90370941842215,2.21671591514854,1.18066171970519,4.72037132218685,9.59573495243032,1.85779347979291,0,0,0,0.232401601740905,0,0.880801318004542,0.553995408531877,0.601633342410425,0,1.11957737119962,0.32389366601898,0,0,0.377875943688809,0.485168122375632,0,2.87817521615278,0.929119112685311,0.28769239232215,1.0246428261164,0.47296445977717,0.344745680736619,0.645484683583826,0,0.376484679085209,1.36453075028923,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.580418477257168,3.97169657283798,0,0,3.12889751052121,0.65156653411535,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,5.46138611262132,1.77901850772711,0.853460445133014,0.800791974072025,4.02326707968138,1.98313461835459,3.81621501814146,0,0.587237189370939,0,9.25199300053181,8.40762844472304,6.847986204152,0.393419540227666,0,0,0,0,0,0,0.779873198196215,0,0,0,0.640456598628376,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0.947109008176067,0,0.604820229674197,0.267440195783507,0,0,6.70700859703636,10.2290049474824,1.0843174571537,3.00802746381534,2.31754430337318,6.36228757640879,5.83961844363163,3.59232305223458,6.20842312895179,4.47957407034943,4.45328856692223,0,0,1.29818957461873,2.61194605948901,8.11043559165077,0.715471872916026,0,0,7.15544666520138,20.645630282547,14.2327605659114,11.3061588384802,49.5009334727689,32.739046990868,16.3016073898712,15.5050055501597,18.8556119223956,8.36801531911676,17.3216606356933,35.7327889687701,16.5962199132755,12.1328816514137,24.3042584364528,15.716752177998,18.6359379279721,10.9233136068823,10.7321646226118,21.833110170067,43.7852167993673,2.63560834872127,15.511210565933,0,5.96366342034382,4.05217637326655,4.10468460520978,7.17091551872034,2.83734705758686,5.04609840128076,30.9572087616144,9.8667019366864,4.04574346019696,12.3933818304113,9.64425228369407,0.908144565869588,1.72852777344,0.70296429550139,4.68240115245481,4.56377457235559,4.33401173600223,2.3486899728753,1.29498355494505,1.12360645361799,0.61246251376468,0.245668634623536,2.16984140469107,8.31602000097437,8.15980866619238,4.55080680969013,1.43723628363248,0.168336113954066,1.62654075833553,1.6623846929051,4.82875382968922,2.45190236639216,6.46023653298366,10.3223286675619,1.79389635688862,1.2813443329114,1.27159140695737,1.50045548042201,0.515262646192195,1.28820270022815,2.41951913231067,2.70042131586026,1.07180705677318,2.01947019395292,1.56484827691909,2.26304479546337,0,0.906768884048762,3.05209066158878,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0.310983165046111,0,0,1.56449532329816,8.36213219650751,5.52539685409922,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,18.4538863656162,22.4386838085513,6.9967581926338,10.2906097969879,0,0,4.13552934676983,0,0.122988438543114,19.0440269431363,0,0,0.100528972411631,0,0.977424915930974,1.03993478527958,30.3095818253074,3.82570336417754,8.6882433734508,4.47535988059329,6.48179717607255,5.70762456703795,0,0,6.89407617044712,30.1865502029617,14.4172227420066,0.93733833986777,11.2548025893236,0.283550194484773,0.0895585227028483,0.290633938513962,0,8.37527504423104,5.19485760678034,5.39053100406007,3.60299883542404,6.43836410474538,10.4771525582079,16.4255022990059,11.7217447210047,15.3965201420435,19.6400511063348,4.80548892550268,9.43227227680908,2.13049060256185,11.3349617896653,1.83345714552375,5.04159691455333,0,27.049688081792,13.5628439458284,6.24044621468197,0.514414748524284,0,0.799266537048298,10.8663275180192,0,2.46972101034231,26.7103671120863,16.7034215908997,3.95975936466715,15.6748476070985,13.9445353376047,26.6927886456092,1.2162378064119,0,0,0.958499421966331,0,8.5582143024431,2.75084482668401,1.64381058040307,3.58121926479791,0,0.197030760201927,0,0.128343036279748,0,0,0.773288812777695,1.00509759200609,0,1.49801404789436,8.97484377612075,26.1081773464702,0.613457458595699,0.500170521059677,1.08506009479894,0.415941723061614,0.356857977594324,0.630809660135739,0.35142424497814,2.10662269809403,0,2.0694614258501,4.64957918974806,6.0841825618762,3.21469373531907,1.37060810223918,0,7.03011288817817,4.52999821719095,2.66818894508611,0,0,1.81434175997808,0.992431231275107,1.07423381301644,2.80660094433074,2.81906128362542,1.53512174720011,1.12597744800525,0,6.16838775210622,18.4664194325652,4.84550220481474,1.03850885836724,17.4315567689939,0,3.80962293576241,0.0920809889358963,12.7444037462713,3.27764102412091,8.65421138732199,50.0831570327227,47.5954783305283,42.35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| ||
|short_description=p1@ITGB3 | |short_description=p1@ITGB3 | ||
}} | }} |
Latest revision as of 03:41, 25 September 2015
Short description: | p1@ITGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGB3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -7bp_to_ENST00000262017, NM_000212, uc002ili.1, uc002ilj.2, uc010wkr.1_5end |
EntrezGene: | ITGB3 |
HGNC: | 6156 |
UniProt: | P05106Q2YFE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.40e-16 | 121 |
endothelial cell of vascular tree | 3.28e-13 | 24 |
meso-epithelial cell | 3.47e-13 | 45 |
endothelial cell | 1.32e-12 | 36 |
blood vessel endothelial cell | 2.21e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.21e-11 | 18 |
epithelial cell of nephron | 6.57e-11 | 15 |
kidney cell | 6.89e-11 | 17 |
kidney epithelial cell | 6.89e-11 | 17 |
kidney tubule cell | 8.43e-09 | 10 |
nephron tubule epithelial cell | 8.43e-09 | 10 |
kidney cortical cell | 9.57e-09 | 12 |
renal cortical epithelial cell | 9.57e-09 | 12 |
muscle precursor cell | 2.47e-08 | 58 |
myoblast | 2.47e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.47e-08 | 58 |
muscle cell | 3.08e-08 | 55 |
lining cell | 1.33e-07 | 58 |
barrier cell | 1.33e-07 | 58 |
smooth muscle cell | 9.10e-07 | 43 |
smooth muscle myoblast | 9.10e-07 | 43 |
Ontology term | p-value | n |
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