FFCP PHASE1:Hg19::chr12:119419336..119419353,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84530 | |EntrezGene=84530 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29389 | |HGNC=29389 | ||
|TSSclassifier=strong | |||
|UniProt=A7MD48 | |UniProt=A7MD48 | ||
|association_with_transcript=36bp_to_ENST00000267260,NM_194286_5end | |association_with_transcript=36bp_to_ENST00000267260,NM_194286_5end | ||
|cluster_id=chr12:119419336..119419353,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_SRRM4_5end | |description=CAGE_peak_1_at_SRRM4_5end | ||
|id=chr12:119419336..119419353,+ | |id=chr12:119419336..119419353,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.10e-11!8;CL:0000540!5.65e-09!6;CL:0000031!5.65e-09!6;CL:0000404!5.65e-09!6;CL:0002322!2.83e-07!5;CL:0002319!3.10e-07!25;CL:0000133!7.13e-07!59 | |ontology_enrichment_celltype=CL:0000047!1.10e-11!8;CL:0000540!5.65e-09!6;CL:0000031!5.65e-09!6;CL:0000404!5.65e-09!6;CL:0002322!2.83e-07!5;CL:0002319!3.10e-07!25;CL:0000133!7.13e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.90e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-22;82!UBERON:0006215;9.21e-09;3!UBERON:0003056;1.92e-07;3 | |||
|ontology_enrichment_disease=DOID:169!9.45e-10!6;DOID:171!1.38e-09!10 | |ontology_enrichment_disease=DOID:169!9.45e-10!6;DOID:171!1.38e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;6.76e-10;10!DOID:169;3.75e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.61e-10,10;DOID:169,3.59e-09,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.01e-51;32!UBERON:0002619;4.64e-51;22!UBERON:0002780;8.04e-51;41!UBERON:0001890;8.04e-51;41!UBERON:0001893;1.86e-49;34!UBERON:0003528;2.74e-49;34!UBERON:0002020;2.74e-49;34!UBERON:0002791;2.05e-48;32!UBERON:0001950;3.93e-47;20!UBERON:0000073;2.14e-46;53!UBERON:0002616;2.14e-46;53!UBERON:0000956;2.55e-44;25!UBERON:0000203;2.55e-44;25!UBERON:0001017;9.84e-36;75!UBERON:0000955;1.11e-34;68!UBERON:0001016;4.17e-34;83!UBERON:0001871;2.50e-16;6!UBERON:0004732;1.17e-15;13!UBERON:0001894;7.73e-15;7!UBERON:0002420;9.93e-15;9!UBERON:0007245;9.93e-15;9!UBERON:0010009;9.93e-15;9!UBERON:0010011;9.93e-15;9!UBERON:0000454;9.93e-15;9!UBERON:0000200;1.17e-14;6!UBERON:0000125;3.68e-14;9!UBERON:0002308;3.68e-14;9!UBERON:0004733;6.13e-14;12!UBERON:0002028;6.13e-14;12!UBERON:0011216;6.87e-13;132!UBERON:0007023;8.48e-13;114!UBERON:0002021;1.27e-12;5!UBERON:0001872;1.48e-12;5!UBERON:0002298;3.01e-12;6!UBERON:0000349;1.07e-11;5!UBERON:0009663;1.05e-10;7!UBERON:0002784;5.85e-10;4!UBERON:0003296;1.26e-09;4!UBERON:0010133;1.26e-09;4!UBERON:0000369;2.97e-09;4!UBERON:0002435;2.97e-09;4!UBERON:0000204;2.97e-09;4!UBERON:0002680;4.47e-09;9!UBERON:0001895;4.47e-09;9!UBERON:0001870;3.57e-08;3!UBERON:0010314;4.76e-08;132!UBERON:0000013;1.90e-07;5!UBERON:0002410;1.90e-07;5!UBERON:0005383;3.07e-07;3!UBERON:0005382;3.07e-07;3!UBERON:0000988;5.18e-07;3!UBERON:0004121;6.27e-07;165!UBERON:0001896;6.99e-07;3!UBERON:0005290;6.99e-07;3 | |||
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|short_description=p1@SRRM4 | |short_description=p1@SRRM4 | ||
}} | }} |
Latest revision as of 18:19, 16 September 2015
Short description: | p1@SRRM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRRM4_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 36bp_to_ENST00000267260, NM_194286_5end |
EntrezGene: | SRRM4 |
HGNC: | 29389 |
UniProt: | A7MD48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.61e-10 | 10 |
neuroendocrine tumor | 3.59e-09 | 6 |