FFCP PHASE1:Hg19::chr17:17584763..17584804,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10743 | |EntrezGene=10743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9834 | |HGNC=9834 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5J4 | |UniProt=Q7Z5J4 | ||
|association_with_transcript=0bp_to_ENST00000353383,NM_030665,uc002grm.2_5end | |association_with_transcript=0bp_to_ENST00000353383,NM_030665,uc002grm.2_5end | ||
|cluster_id=chr17:17584763..17584804,+ | |||
|description=CAGE_peak_1_at_RAI1_5end | |description=CAGE_peak_1_at_RAI1_5end | ||
|id=chr17:17584763..17584804,+ | |id=chr17:17584763..17584804,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.82e-21!254;CL:0000076!1.85e-14!62;CL:0002078!4.79e-13!44;CL:0000115!1.98e-12!35;CL:0000213!6.37e-12!57;CL:0000215!6.37e-12!57;CL:0002139!1.68e-11!24;CL:0000071!1.19e-09!18;CL:0002546!1.19e-09!18;CL:0000220!2.38e-09!246;CL:0002321!1.15e-08!248;CL:1000449!8.11e-08!16;CL:1000497!2.41e-07!18;CL:0002518!2.41e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.82e-21!254;CL:0000076!1.85e-14!62;CL:0002078!4.79e-13!44;CL:0000115!1.98e-12!35;CL:0000213!6.37e-12!57;CL:0000215!6.37e-12!57;CL:0002139!1.68e-11!24;CL:0000071!1.19e-09!18;CL:0002546!1.19e-09!18;CL:0000220!2.38e-09!246;CL:0002321!1.15e-08!248;CL:1000449!8.11e-08!16;CL:1000497!2.41e-07!18;CL:0002518!2.41e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.88e-11;24!CL:0000115;7.53e-11;36!CL:0000071;1.34e-09;18!CL:0002078;9.05e-09;45!CL:1000449;1.46e-08;15!CL:1000497;5.36e-08;17!CL:0002518;5.36e-08;17!CL:0000076;9.50e-08;63!CL:0000213;1.68e-07;58!CL:0000215;1.68e-07;58!CL:0002681;4.82e-07;12!CL:0002584;4.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.09e-21,253;CL:0000076,5.93e-14,63;CL:0002078,1.83e-13,45;CL:0000115,7.46e-13,36;CL:0000213,2.59e-12,58;CL:0000215,2.59e-12,58;CL:0002139,1.68e-11,24;CL:0000071,1.19e-09,18;CL:0002546,1.19e-09,18;CL:0002321,8.08e-09,250;CL:1000449,1.62e-08,15;CL:1000497,6.12e-08,17;CL:0002518,6.12e-08,17;CL:0002681,5.45e-07,12;CL:0002584,5.45e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.34e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.52e-13!241;UBERON:0009569!3.52e-12!113;UBERON:0000119!1.80e-11!312;UBERON:0000483!3.09e-11!309;UBERON:0000477!1.71e-10!286;UBERON:0000480!1.79e-10!626;UBERON:0000467!1.82e-10!625;UBERON:0000487!2.44e-10!22;UBERON:0001008!6.01e-10!45;UBERON:0005177!6.20e-10!107;UBERON:0000058!1.11e-09!26;UBERON:0001986!1.19e-09!18;UBERON:0004638!1.19e-09!18;UBERON:0004852!1.19e-09!18;UBERON:0000475!1.20e-09!365;UBERON:0006554!1.95e-09!44;UBERON:0003914!2.97e-09!118;UBERON:0000466!3.57e-09!126;UBERON:0000025!7.22e-09!194;UBERON:0000468!9.47e-09!659;UBERON:0000062!1.34e-08!511;UBERON:0005172!1.34e-08!55;UBERON:0005173!1.34e-08!55;UBERON:0006914!1.63e-08!25;UBERON:0004876!3.90e-08!20;UBERON:0000080!4.81e-08!18;UBERON:0002120!4.81e-08!18;UBERON:0004875!4.81e-08!18;UBERON:0005721!4.81e-08!18;UBERON:0005754!4.81e-08!18;UBERON:0007297!4.81e-08!18;UBERON:0003887!4.91e-08!21;UBERON:0002113!5.50e-08!27;UBERON:0003918!5.50e-08!27;UBERON:0005095!5.50e-08!27;UBERON:0007687!5.50e-08!27;UBERON:0003064!7.37e-08!37;UBERON:0006555!8.11e-08!17;UBERON:0005103!8.11e-08!17;UBERON:0000083!8.11e-08!17;UBERON:0009201!8.11e-08!17;UBERON:0004819!8.11e-08!17;UBERON:0006553!8.11e-08!17;UBERON:0003074!8.11e-08!17;UBERON:0003060!8.11e-08!17;UBERON:0004211!8.11e-08!16;UBERON:0001285!8.11e-08!16;UBERON:0007684!8.11e-08!16;UBERON:0003220!8.11e-08!16;UBERON:0004208!8.11e-08!16;UBERON:0000464!8.79e-08!104;UBERON:0000353!8.85e-08!17;UBERON:0002417!1.24e-07!61;UBERON:0000916!1.24e-07!61;UBERON:0000489!4.15e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.30e-11;30!UBERON:0001008;7.30e-11;30!UBERON:0000487;2.51e-10;22!UBERON:0004638;1.34e-09;18!UBERON:0001986;1.34e-09;18!UBERON:0004852;1.34e-09;18!UBERON:0006555;1.46e-08;15!UBERON:0004819;1.46e-08;15!UBERON:0001285;1.46e-08;15!UBERON:0007684;1.46e-08;15!UBERON:0006914;1.53e-08;25!UBERON:0000490;1.95e-08;33!UBERON:0000353;2.14e-08;15!UBERON:0002113;3.26e-08;24!UBERON:0011143;3.26e-08;24!UBERON:0000489;2.87e-07;29!UBERON:0001225;4.82e-07;12!UBERON:0008987;4.82e-07;12 | |||
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| ||
|short_description=p1@RAI1 | |short_description=p1@RAI1 | ||
}} | }} |
Latest revision as of 21:59, 18 September 2015
Short description: | p1@RAI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000353383, NM_030665, uc002grm.2_5end |
EntrezGene: | RAI1 |
HGNC: | 9834 |
UniProt: | Q7Z5J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.09e-21 | 253 |
squamous epithelial cell | 5.93e-14 | 63 |
meso-epithelial cell | 1.83e-13 | 45 |
endothelial cell | 7.46e-13 | 36 |
lining cell | 2.59e-12 | 58 |
barrier cell | 2.59e-12 | 58 |
endothelial cell of vascular tree | 1.68e-11 | 24 |
blood vessel endothelial cell | 1.19e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.19e-09 | 18 |
embryonic cell | 8.08e-09 | 250 |
epithelial cell of nephron | 1.62e-08 | 15 |
kidney cell | 6.12e-08 | 17 |
kidney epithelial cell | 6.12e-08 | 17 |
kidney cortical cell | 5.45e-07 | 12 |
renal cortical epithelial cell | 5.45e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.73e-13 | 240 |
subdivision of trunk | 1.72e-12 | 112 |
trunk region element | 8.25e-12 | 101 |
cell layer | 6.53e-11 | 309 |
epithelium | 1.11e-10 | 306 |
simple squamous epithelium | 2.44e-10 | 22 |
blood vessel endothelium | 1.19e-09 | 18 |
endothelium | 1.19e-09 | 18 |
cardiovascular system endothelium | 1.19e-09 | 18 |
renal system | 1.38e-09 | 48 |
epithelial tube | 1.98e-09 | 117 |
tube | 3.84e-09 | 192 |
urinary system structure | 4.32e-09 | 47 |
abdomen element | 6.99e-09 | 54 |
abdominal segment element | 6.99e-09 | 54 |
nephron epithelium | 1.62e-08 | 15 |
renal tubule | 1.62e-08 | 15 |
nephron tubule | 1.62e-08 | 15 |
nephron | 1.62e-08 | 15 |
uriniferous tubule | 1.62e-08 | 15 |
nephrogenic mesenchyme | 1.62e-08 | 15 |
squamous epithelium | 1.63e-08 | 25 |
excretory tube | 1.76e-08 | 16 |
kidney epithelium | 1.76e-08 | 16 |
kidney | 1.90e-08 | 26 |
kidney mesenchyme | 1.90e-08 | 26 |
upper urinary tract | 1.90e-08 | 26 |
kidney rudiment | 1.90e-08 | 26 |
kidney field | 1.90e-08 | 26 |
parenchyma | 2.25e-08 | 15 |
duct | 3.18e-08 | 19 |
abdominal segment of trunk | 7.17e-08 | 60 |
abdomen | 7.17e-08 | 60 |
cavitated compound organ | 1.80e-07 | 31 |
trunk | 3.17e-07 | 199 |
cortex of kidney | 5.45e-07 | 12 |
renal parenchyma | 5.45e-07 | 12 |