FFCP PHASE1:Mm9::chr8:77397026..77397036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71597 | |EntrezGene=71597 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=A1A546,B1Q2M1 | |UniProt=A1A546,B1Q2M1 | ||
|association_with_transcript=-36bp_to_NM_027837,uc009mgv.1,uc012ggb.1_5end | |association_with_transcript=-36bp_to_NM_027837,uc009mgv.1,uc012ggb.1_5end | ||
|cluster_id=chr8:77397026..77397036,+ | |||
|description=CAGE_peak_6_at_Isx_5end | |description=CAGE_peak_6_at_Isx_5end | ||
|id=chr8:77397026..77397036,+ | |id=chr8:77397026..77397036,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.56e-14!9;CL:0002251!3.56e-14!9;CL:0000239!1.10e-10!6;CL:0000677!1.10e-10!6;CL:0000212!1.10e-10!6;CL:0000584!1.10e-10!6;CL:0000075!5.22e-09!7;CL:0002076!1.11e-07!15;CL:0000066!2.31e-07!25 | |ontology_enrichment_celltype=CL:0002563!3.56e-14!9;CL:0002251!3.56e-14!9;CL:0000239!1.10e-10!6;CL:0000677!1.10e-10!6;CL:0000212!1.10e-10!6;CL:0000584!1.10e-10!6;CL:0000075!5.22e-09!7;CL:0002076!1.11e-07!15;CL:0000066!2.31e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.67e-17,6;CL:0000677,4.67e-17,6;CL:0000584,4.67e-17,6;CL:0002563,1.10e-14,9;CL:0002251,1.10e-14,9;CL:0000075,1.57e-14,7;CL:0000066,1.32e-09,25;CL:0000682,3.24e-09,3;CL:0002076,1.98e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.07e-31!43;UBERON:0005409!1.22e-25!59;UBERON:0000344!2.39e-23!15;UBERON:0001242!1.72e-20!13;UBERON:0000060!1.72e-20!13;UBERON:0001262!1.72e-20!13;UBERON:0004786!1.72e-20!13;UBERON:0003350!3.56e-14!9;UBERON:0004808!3.56e-14!9;UBERON:0001277!3.56e-14!9;UBERON:0004923!5.63e-13!24;UBERON:0000485!3.25e-11!11;UBERON:0001007!2.78e-08!128;UBERON:0001555!2.78e-08!128;UBERON:0007026!2.78e-08!128;UBERON:0004119!5.17e-08!130;UBERON:0000925!5.17e-08!130;UBERON:0006595!5.17e-08!130;UBERON:0004921!4.29e-07!126;UBERON:0004185!4.29e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!1.07e-31!43;UBERON:0005409!1.22e-25!59;UBERON:0000344!2.39e-23!15;UBERON:0001242!1.72e-20!13;UBERON:0000060!1.72e-20!13;UBERON:0001262!1.72e-20!13;UBERON:0004786!1.72e-20!13;UBERON:0003350!3.56e-14!9;UBERON:0004808!3.56e-14!9;UBERON:0001277!3.56e-14!9;UBERON:0004923!5.63e-13!24;UBERON:0000485!3.25e-11!11;UBERON:0001007!2.78e-08!128;UBERON:0001555!2.78e-08!128;UBERON:0007026!2.78e-08!128;UBERON:0004119!5.17e-08!130;UBERON:0000925!5.17e-08!130;UBERON:0006595!5.17e-08!130;UBERON:0004921!4.29e-07!126;UBERON:0004185!4.29e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.09e-57,31;UBERON:0005409,1.78e-39,47;UBERON:0000344,1.06e-29,15;UBERON:0001242,6.30e-25,13;UBERON:0001262,6.30e-25,13;UBERON:0004786,6.30e-25,13;UBERON:0004923,1.55e-17,24;UBERON:0001007,2.54e-15,116;UBERON:0001555,2.54e-15,116;UBERON:0007026,2.54e-15,116;UBERON:0004119,5.78e-15,118;UBERON:0000925,5.78e-15,118;UBERON:0006595,5.78e-15,118;UBERON:0003350,1.10e-14,9;UBERON:0004808,1.10e-14,9;UBERON:0001277,1.10e-14,9;UBERON:0004921,4.43e-13,114;UBERON:0002108,4.41e-12,4;UBERON:0000485,7.64e-12,11;UBERON:0000331,8.71e-10,3;UBERON:0002116,8.71e-10,3;UBERON:0001204,8.71e-10,3;UBERON:0001168,8.71e-10,3;UBERON:0001155,3.37e-07,2;UBERON:0000059,3.37e-07,2 | |||
|phase1_expression=0,5.58360652222978,4.09499315450582,6.35174843744343,5.00895729946347,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,3.44113921600755,3.44539178469012,2.58457197695445,5.38678081714723,7.60093677825496,3.78045194639896,3.76941868114018,0,0,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,5.02456076660734,0.213288250535234,0,1.28867461322093,2.21851877085677,2.89091456998331,4.75564065281398,4.74529061544512,2.79988223030818,3.2673577144035,3.58121649674071,3.70431765526328,0.898819408654221,2.37751854862164,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0,0,6.61036363788144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.64183841918363,0,0,0,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.115884325944855,0,0.824171801606613,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,4.09499315450582,6.35174843744343,5.00895729946347,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,3.44113921600755,3.44539178469012,2.58457197695445,5.38678081714723,7.60093677825496,3.78045194639896,3.76941868114018,0,0,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,5.02456076660734,0.213288250535234,0,1.28867461322093,2.21851877085677,2.89091456998331,4.75564065281398,4.74529061544512,2.79988223030818,3.2673577144035,3.58121649674071,3.70431765526328,0.898819408654221,2.37751854862164,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0,0,6.61036363788144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.64183841918363,0,0,0,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.115884325944855,0,0.824171801606613,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p6@Isx | |short_description=p6@Isx | ||
}} | }} |
Latest revision as of 19:12, 25 September 2015
Short description: | p6@Isx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Isx_5end |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | -36bp_to_NM_027837, uc009mgv.1, uc012ggb.1_5end |
EntrezGene: | Isx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.67e-17 | 6 |
gut absorptive cell | 4.67e-17 | 6 |
enterocyte | 4.67e-17 | 6 |
intestinal epithelial cell | 1.10e-14 | 9 |
epithelial cell of alimentary canal | 1.10e-14 | 9 |
columnar/cuboidal epithelial cell | 1.57e-14 | 7 |
epithelial cell | 1.32e-09 | 25 |
M cell of gut | 3.24e-09 | 3 |
endo-epithelial cell | 1.98e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.09e-57 | 31 |
gastrointestinal system | 1.78e-39 | 47 |
mucosa | 1.06e-29 | 15 |
intestinal mucosa | 6.30e-25 | 13 |
wall of intestine | 6.30e-25 | 13 |
gastrointestinal system mucosa | 6.30e-25 | 13 |
organ component layer | 1.55e-17 | 24 |
digestive system | 2.54e-15 | 116 |
digestive tract | 2.54e-15 | 116 |
primitive gut | 2.54e-15 | 116 |
endoderm-derived structure | 5.78e-15 | 118 |
endoderm | 5.78e-15 | 118 |
presumptive endoderm | 5.78e-15 | 118 |
epithelium of mucosa | 1.10e-14 | 9 |
gastrointestinal system epithelium | 1.10e-14 | 9 |
intestinal epithelium | 1.10e-14 | 9 |
subdivision of digestive tract | 4.43e-13 | 114 |
small intestine | 4.41e-12 | 4 |
simple columnar epithelium | 7.64e-12 | 11 |
ileal mucosa | 8.71e-10 | 3 |
ileum | 8.71e-10 | 3 |
mucosa of small intestine | 8.71e-10 | 3 |
wall of small intestine | 8.71e-10 | 3 |
colon | 3.37e-07 | 2 |
large intestine | 3.37e-07 | 2 |