FFCP PHASE1:Hg19::chr11:5626359..5626406,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117854 | |EntrezGene=117854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16277 | |HGNC=16277 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P0L0 | |UniProt=Q6P0L0 | ||
|association_with_transcript=0bp_to_ENST00000469187,uc001mbg.1_5end | |association_with_transcript=0bp_to_ENST00000469187,uc001mbg.1_5end | ||
|cluster_id=chr11:5626359..5626406,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_8_at_TRIM6_5end | |description=CAGE_peak_8_at_TRIM6_5end | ||
|id=chr11:5626359..5626406,+ | |id=chr11:5626359..5626406,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.34e-27!3;CL:0002536!5.37e-19!2;CL:0002537!1.24e-16!5;CL:0000239!8.34e-13!3;CL:1000615!8.34e-13!3;CL:0002306!8.34e-13!3;CL:1000507!6.88e-12!12;CL:1000494!6.88e-12!12;CL:0002681!5.47e-11!13;CL:0002584!5.47e-11!13;CL:1000449!5.86e-09!16;CL:1000497!5.60e-08!18;CL:0002518!5.60e-08!18 | |ontology_enrichment_celltype=CL:0002541!1.34e-27!3;CL:0002536!5.37e-19!2;CL:0002537!1.24e-16!5;CL:0000239!8.34e-13!3;CL:1000615!8.34e-13!3;CL:0002306!8.34e-13!3;CL:1000507!6.88e-12!12;CL:1000494!6.88e-12!12;CL:0002681!5.47e-11!13;CL:0002584!5.47e-11!13;CL:1000449!5.86e-09!16;CL:1000497!5.60e-08!18;CL:0002518!5.60e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.14e-74;3!CL:0000349;2.06e-63;19!CL:0002536;5.15e-50;2!CL:0002537;7.73e-21;5!CL:0000239;1.60e-09;3!CL:1000615;1.60e-09;3!CL:0002306;1.60e-09;3!CL:0000134;4.07e-09;55!CL:0000723;5.96e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.75e-74,3;CL:0000349,2.16e-63,19;CL:0002536,4.00e-50,2;CL:0002537,8.13e-21,5;CL:0000239,1.54e-09,3;CL:1000615,1.54e-09,3;CL:0002306,1.54e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;4.63e-120;10!UBERON:0000158;4.63e-120;10!UBERON:0003124;2.14e-74;3!UBERON:0000920;2.14e-74;3!UBERON:0000305;1.31e-56;7!UBERON:0000478;2.79e-50;24!UBERON:0004923;2.52e-12;55!UBERON:0006853;1.60e-09;3!UBERON:0007685;1.60e-09;3!UBERON:0004134;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.09e-86,14;UBERON:0000158,7.09e-86,14;UBERON:0000920,2.75e-74,3;UBERON:0000305,1.22e-56,7;UBERON:0000478,2.89e-50,24;UBERON:0004871,1.17e-49,8;UBERON:0003124,2.08e-32,7;UBERON:0004923,2.04e-18,66;UBERON:0006853,1.54e-09,3;UBERON:0007685,1.54e-09,3;UBERON:0004134,1.54e-09,3 | |||
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|short_description=p8@TRIM6 | |short_description=p8@TRIM6 | ||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p8@TRIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRIM6_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000469187, uc001mbg.1_5end |
EntrezGene: | TRIM6 |
HGNC: | 16277 |
UniProt: | Q6P0L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.75e-74 | 3 |
extraembryonic cell | 2.16e-63 | 19 |
amniotic epithelial cell | 4.00e-50 | 2 |
amnion mesenchymal stem cell | 8.13e-21 | 5 |
brush border epithelial cell | 1.54e-09 | 3 |
kidney cortex tubule cell | 1.54e-09 | 3 |
epithelial cell of proximal tubule | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.09e-86 | 14 |
membranous layer | 7.09e-86 | 14 |
egg chorion | 2.75e-74 | 3 |
amnion | 1.22e-56 | 7 |
extraembryonic structure | 2.89e-50 | 24 |
somatic layer of lateral plate mesoderm | 1.17e-49 | 8 |
chorion | 2.08e-32 | 7 |
organ component layer | 2.04e-18 | 66 |
renal cortex tubule | 1.54e-09 | 3 |
region of nephron tubule | 1.54e-09 | 3 |
proximal tubule | 1.54e-09 | 3 |