FFCP PHASE1:Hg19::chr11:31832610..31832639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=-17bp_to_ENST00000379111,uc001mte.3_5end | |association_with_transcript=-17bp_to_ENST00000379111,uc001mte.3_5end | ||
|cluster_id=chr11:31832610..31832639,- | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_5_at_PAX6_5end | |description=CAGE_peak_5_at_PAX6_5end | ||
|id=chr11:31832610..31832639,- | |id=chr11:31832610..31832639,- | ||
|ontology_enrichment_celltype=CL:0002319!4.41e-08!25;CL:0000128!1.03e-07!7;CL:0000126!1.03e-07!7;CL:0000127!1.03e-07!7;CL:0002453!1.03e-07!7 | |ontology_enrichment_celltype=CL:0002319!4.41e-08!25;CL:0000128!1.03e-07!7;CL:0000126!1.03e-07!7;CL:0000127!1.03e-07!7;CL:0002453!1.03e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.32e-11;7!CL:0000126;1.32e-11;7!CL:0000127;1.32e-11;7!CL:0002319;9.89e-10;25!CL:0000306;2.28e-08;4!CL:0002222;2.28e-08;4!CL:0002224;2.28e-08;4!CL:0000064;8.92e-07;3!CL:0000067;8.92e-07;3!CL:0005012;8.92e-07;3!CL:0002304;8.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.06e-12,7;CL:0000126,8.06e-12,7;CL:0000127,8.06e-12,7;CL:0002453,8.06e-12,7;CL:0002319,7.90e-10,25;CL:0000306,2.31e-08,4;CL:0002222,2.31e-08,4;CL:0002224,2.31e-08,4;CL:0000064,8.96e-07,3;CL:0000067,8.96e-07,3;CL:0005012,8.96e-07,3;CL:0002304,8.96e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.68e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.34e-16!143;DOID:14566!6.81e-13!239;DOID:162!8.40e-13!235;DOID:305!1.04e-12!106 | |ontology_enrichment_disease=DOID:0050687!2.34e-16!143;DOID:14566!6.81e-13!239;DOID:162!8.40e-13!235;DOID:305!1.04e-12!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.92e-10,143;DOID:162,1.43e-07,235;DOID:305,1.96e-07,106;DOID:14566,3.78e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002346!4.22e-40!90;UBERON:0003075!3.91e-39!86;UBERON:0007284!3.91e-39!86;UBERON:0005743!6.75e-38!86;UBERON:0000073!8.77e-37!94;UBERON:0001016!8.77e-37!94;UBERON:0001049!5.47e-35!57;UBERON:0005068!5.47e-35!57;UBERON:0006241!5.47e-35!57;UBERON:0007135!5.47e-35!57;UBERON:0001017!1.98e-34!82;UBERON:0002616!7.32e-31!59;UBERON:0003056!9.52e-31!61;UBERON:0000955!6.52e-29!69;UBERON:0006238!6.52e-29!69;UBERON:0000033!1.09e-25!123;UBERON:0000924!1.34e-24!173;UBERON:0006601!1.34e-24!173;UBERON:0004121!1.51e-23!169;UBERON:0002780!2.42e-23!41;UBERON:0001890!2.42e-23!41;UBERON:0006240!2.42e-23!41;UBERON:0000153!2.82e-23!129;UBERON:0007811!2.82e-23!129;UBERON:0003080!1.82e-22!42;UBERON:0002020!1.73e-18!34;UBERON:0003528!1.73e-18!34;UBERON:0001893!1.80e-18!34;UBERON:0002791!7.15e-18!33;UBERON:0001869!2.29e-17!32;UBERON:0003076!5.53e-14!15;UBERON:0003057!5.53e-14!15;UBERON:0000956!8.89e-14!25;UBERON:0000203!8.89e-14!25;UBERON:0007625!3.55e-12!11;UBERON:0004733!1.18e-11!12;UBERON:0002028!1.18e-11!12;UBERON:0007277!1.18e-11!12;UBERON:0002619!3.32e-11!22;UBERON:0004732!1.98e-10!13;UBERON:0000970!3.61e-10!20;UBERON:0001950!4.33e-10!20;UBERON:0002104!2.01e-09!21;UBERON:0000019!2.67e-09!19;UBERON:0000047!2.67e-09!19;UBERON:0004088!2.67e-09!19;UBERON:0003072!2.67e-09!19;UBERON:0003071!2.67e-09!19;UBERON:0004128!2.67e-09!19;UBERON:0002680!2.75e-09!9;UBERON:0001895!2.75e-09!9;UBERON:0010092!2.75e-09!9;UBERON:0000020!3.84e-08!23;UBERON:0001456!6.05e-08!21;UBERON:0001032!1.38e-07!24;UBERON:0004456!1.38e-07!24;UBERON:0007023!1.44e-07!115;UBERON:0002037!2.43e-07!6;UBERON:0006215!2.43e-07!6;UBERON:0000064!4.57e-07!219;UBERON:0001801!7.28e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.74e-19;11!UBERON:0004733;1.29e-15;12!UBERON:0002028;1.29e-15;12!UBERON:0000970;1.74e-15;20!UBERON:0002104;1.50e-14;21!UBERON:0004732;3.42e-14;13!UBERON:0000019;4.72e-14;19!UBERON:0000047;4.72e-14;19!UBERON:0004088;4.72e-14;19!UBERON:0010230;4.72e-14;19!UBERON:0000020;6.30e-13;23!UBERON:0001456;2.34e-12;21!UBERON:0001032;3.21e-12;24!UBERON:0004456;3.21e-12;24!UBERON:0002680;9.38e-12;9!UBERON:0001895;9.38e-12;9!UBERON:0000073;1.60e-11;53!UBERON:0002616;1.60e-11;53!UBERON:0002037;4.66e-11;6!UBERON:0001801;8.07e-10;14!UBERON:0001017;6.76e-09;75!UBERON:0010077;2.28e-08;4!UBERON:0005389;2.28e-08;4!UBERON:0000484;2.28e-08;4!UBERON:0000965;2.28e-08;4!UBERON:0001803;2.28e-08;4!UBERON:0000955;2.50e-08;68!UBERON:0000488;2.52e-08;4!UBERON:0001016;9.09e-08;83!UBERON:0003296;4.88e-07;4!UBERON:0010133;4.88e-07;4!UBERON:0010371;6.03e-07;31!UBERON:0001778;8.92e-07;3!UBERON:0001775;8.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,6.49e-31,82;UBERON:0007284,6.49e-31,82;UBERON:0002346,2.65e-30,86;UBERON:0010371,3.84e-24,104;UBERON:0001049,2.72e-22,56;UBERON:0005068,2.72e-22,56;UBERON:0006241,2.72e-22,56;UBERON:0007135,2.72e-22,56;UBERON:0001017,3.45e-22,81;UBERON:0001016,3.87e-20,89;UBERON:0003076,1.03e-19,15;UBERON:0003057,1.03e-19,15;UBERON:0003056,2.82e-19,61;UBERON:0007625,3.00e-19,11;UBERON:0000073,3.40e-19,53;UBERON:0002616,3.40e-19,53;UBERON:0004121,7.61e-18,171;UBERON:0000924,7.61e-18,171;UBERON:0006601,7.61e-18,171;UBERON:0010314,9.99e-18,132;UBERON:0004733,7.90e-16,12;UBERON:0002028,7.90e-16,12;UBERON:0007277,7.90e-16,12;UBERON:0000955,3.41e-15,68;UBERON:0006238,3.41e-15,68;UBERON:0000970,1.34e-14,21;UBERON:0002104,1.34e-14,21;UBERON:0004732,2.18e-14,13;UBERON:0000019,3.30e-13,20;UBERON:0000047,3.30e-13,20;UBERON:0010312,3.30e-13,20;UBERON:0004088,3.30e-13,20;UBERON:0010230,3.30e-13,20;UBERON:0003072,3.30e-13,20;UBERON:0004128,3.30e-13,20;UBERON:0003071,3.30e-13,20;UBERON:0000020,2.92e-12,24;UBERON:0001032,2.92e-12,24;UBERON:0004456,2.92e-12,24;UBERON:0002680,6.83e-12,9;UBERON:0001895,6.83e-12,9;UBERON:0010092,6.83e-12,9;UBERON:0001456,1.14e-11,22;UBERON:0002037,3.37e-11,6;UBERON:0006215,3.37e-11,6;UBERON:0001801,8.54e-10,14;UBERON:0002780,7.59e-09,41;UBERON:0001890,7.59e-09,41;UBERON:0003080,7.59e-09,41;UBERON:0006240,7.59e-09,41;UBERON:0010077,2.31e-08,4;UBERON:0005389,2.31e-08,4;UBERON:0000484,2.31e-08,4;UBERON:0002546,2.31e-08,4;UBERON:0000965,2.31e-08,4;UBERON:0001803,2.31e-08,4;UBERON:0003073,2.31e-08,4;UBERON:0005426,2.31e-08,4;UBERON:0000488,2.53e-08,4;UBERON:0011216,7.02e-08,223;UBERON:0005085,2.87e-07,31;UBERON:0003296,4.41e-07,4;UBERON:0010133,4.41e-07,4;UBERON:0001778,8.96e-07,3;UBERON:0001775,8.96e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67860020691794,2.24400760368678,1.88072832886853,4.86601178122796,5.61185142798825,4.14290710662849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,15.2201055634149,9.53436409089025,8.69564378361948,0.130979075497713,0.728590576585084,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0.757301322732344,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0.365921118388786,0,0.348581828608555,1.86589899027667,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46076306776166,0,0,0,0,0,0,5.77325368101093,8.23105875323045,10.0971477042807,0,0,0,0,0,0,0,0,0,1.17587489739202,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,18.0407183197949,14.3153839243384,5.41302168944387,2.01019518401218,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.79515087581472,3.60816110269676,6.18218949862176,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,16.4176944707291,0,0,0,0.159426272728822,0,0,1.2700414963433,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,4.92349595790849,0,0,0,2.8071081061233,0,0.606802608747567,0,12.5019904594822,0,0,0,3.97659059106519,0.281338832821026,2.78271762557265,0.659215496907038,0,0.19924798825107,0.276283915531148,29.7280642468046,2.96579179256249,0,0,0.179736702294654,0.537063524026827,0,0,0,0,2.90799823828566,0.556608588971108,0,0,0,0,0,0,3.07303986298317,5.17115059862197,0,21.0086243869284,1.77148277162768,0.241192877250816,82.3941376112249,41.7989602540029,38.4211904639612,1.09692698576986,1.63407695278485,0.139423744278603,0,0,0,0.628303510868405,0.54323685961004,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,2.27704479269022,0,1.26598838716816,0,0,0,0,0.176915129006678,0,13.9364930479892,8.89660360414821,10.9643046980728,1.21322039365219,0,1.1713222286267,0,1.36965233252463,4.12726645207958,0,3.62972148145992,0.61214552326098,0.063186579628488,0.901940516486955,3.83646308169814,0,0,0,0,0.284609546029793,0,1.90915712168644,0.0979923974143777,0.174118413160805,0,10.1471759158254,1.45134496933628,2.77739404927505,1.14961639874493,0,0,6.77942222341597,0,0.596143835108969,0.823040347426423,0.782205530939212,0,0,0.999048047910651,1.15272333723285,21.4183434830262,0.343189995723929,1.00838358591705,2.60930324687408,0,0,0,0.101998217636322,0,1.80126086612937,0.684526894459965,0,1.71906176567983,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95282444544246,0,1.59045937961861,0.544813624446302,0,0,0,0,0,1.21499113316049,0,0,0,0,0.717149357331379,0.767660789277781,0,0,0,0,0,0,11.9730191562487,0.082092520749339,0,0,0,0,1.55139547633861,0.79339561045614,0,3.52407511158336,0,0,0,0,0,7.06397070609196,0,0,0,0,0,0,0,1.34228891392159,0.250381861413,3.44045517414043,2.10765197920019,1.98708489412427,0.138348634936231,0,0,0,0.941063278792687,8.43002830452387,2.75349954360568,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,2.60994291965212,0.226705925512272,5.32501690944818,0,0.71635536432595,0,0,2.12026975135057,0.964570191354574,4.73038833828603,1.79369063011563,3.10887307558079,1.82315973706429,0.414775308455192,0,0,0,3.60370833731054,0,0,0,1.8137594048004,0,0,0.552317850755522,0.419638523158333,1.24415452006595,0,4.31299245586727,0.471797825567689,0,0,1.48802444071178,0.495743057036009,0,0,0,0,0,0,0.385375350578757,0,0.798169295285756,0.615349092722265,0.756215088665154,1.45230230174858,1.29180516505481,0,0,1.41563668017288,0.183428598521679,0,0,1.3807198521202,0,0,1.0085253435176,0,0,0.163771917510097,3.54854606920909,1.01306376927592,0.781078098613847,0.206686796501184,0.443910671357348,2.18789923607288,0,0,0.527613733078862,0.255524855279191,20.8923715992532,3.69912094440706,1.82089681270989,1.13831095675649,0,0,0.342976018874837,2.17503145525861,0.460409414939944,0.827356886187777,2.00216523405724,0,0.314231179832004,0,0,6.69375532777726,0,6.93322478513567,0,0.348724276104376,2.43401581223611,0,0,0,0,0,0.473328002922261,0.681707238073262,0,0.9164274741762,0,0,0,0,0.731507549893617,0,0,0,0,0.701818390386317,3.58111395290463,30.4435432390576,3.61427462524672,0.109940516745429,0,0.0771741581079447,0.4371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| ||
|short_description=p5@PAX6 | |short_description=p5@PAX6 | ||
}} | }} |
Latest revision as of 14:57, 17 September 2015
Short description: | p5@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | -17bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.06e-12 | 7 |
macroglial cell | 8.06e-12 | 7 |
astrocyte | 8.06e-12 | 7 |
oligodendrocyte precursor cell | 8.06e-12 | 7 |
neural cell | 7.90e-10 | 25 |
crystallin accumulating cell | 2.31e-08 | 4 |
vertebrate lens cell | 2.31e-08 | 4 |
lens epithelial cell | 2.31e-08 | 4 |
ciliated cell | 8.96e-07 | 3 |
ciliated epithelial cell | 8.96e-07 | 3 |
multi-ciliated epithelial cell | 8.96e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.92e-10 | 143 |
cancer | 1.43e-07 | 235 |
carcinoma | 1.96e-07 | 106 |
disease of cellular proliferation | 3.78e-07 | 239 |