FFCP PHASE1:Hg19::chr10:123923187..123923202,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:123923187..123923202,+
|short_description=p16@TACC2
|description=CAGE_peak_16_at_TACC2_5end
|association_with_transcript=82bp_to_ENST00000368999,NM_006997...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|UniProt=Q4VXL8, | |TSSclassifier=strong | ||
|UniProt=Q4VXL8,O95359 | |||
|association_with_transcript=82bp_to_ENST00000368999,NM_006997,NM_206860,uc001lfz.2,uc001lga.2,uc009xzy.2_5end | |||
|cluster_id=chr10:123923187..123923202,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_16_at_TACC2_5end | |||
|id=chr10:123923187..123923202,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.77e-10!8;CL:0002322!3.06e-08!5;CL:0000133!6.11e-08!59;CL:0000540!5.25e-07!6;CL:0000031!5.25e-07!6;CL:0000404!5.25e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.72e-08;7!CL:0000586;2.72e-08;7!CL:0000333;8.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.07e-08,7;CL:0000586,4.07e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.88e-18;82!UBERON:0006215;7.68e-13;3!UBERON:0010122;8.88e-08;2 | |||
|ontology_enrichment_disease=DOID:3095!2.03e-07!22;DOID:2994!2.03e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.39e-07;22!DOID:2994;6.39e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.73e-07,22;DOID:2994,8.73e-07,22 | |||
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| ||
|short_description=p16@TACC2 | |||
}} | }} |
Latest revision as of 20:01, 16 September 2015
Short description: | p16@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TACC2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 82bp_to_ENST00000368999, NM_006997, NM_206860, uc001lfz.2, uc001lga.2, uc009xzy.2_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | Q4VXL8O95359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.07e-08 | 7 |
germ cell | 4.07e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.73e-07 | 22 |
germ cell cancer | 8.73e-07 | 22 |