FFCP PHASE1:Hg19::chr10:101292921..101292931,+: Difference between revisions
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|id=chr10:101292921..101292931,+
|short_description=p4@NKX2-3
|description=CAGE_peak_4_at_NKX2-3_5end
|association_with_transcript=183bp_to_AK300856_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=159296 | |EntrezGene=159296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7836 | |HGNC=7836 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAU0 | |UniProt=Q8TAU0 | ||
|association_with_transcript=183bp_to_AK300856_5end | |||
|cluster_id=chr10:101292921..101292931,+ | |||
|coexpression_cluster_id=C717 | |||
|description=CAGE_peak_4_at_NKX2-3_5end | |||
|id=chr10:101292921..101292931,+ | |||
|ontology_enrichment_celltype=CL:0002504!1.77e-18!3;CL:1000279!1.77e-18!3;CL:1000280!1.77e-18!3;CL:0002554!5.74e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.64e-30;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.01e-43!35;UBERON:0000160!1.03e-37!27;UBERON:0001155!3.97e-37!9;UBERON:0000059!2.08e-30!11;UBERON:0002106!2.12e-18!3;UBERON:0004854!2.12e-18!3;UBERON:0009034!2.12e-18!3;UBERON:0002095!2.12e-18!3;UBERON:0004782!2.12e-18!3;UBERON:0003281!2.12e-18!3;UBERON:0009664!2.12e-18!3;UBERON:0002296!2.12e-18!3;UBERON:0005602!2.12e-18!3;UBERON:0001179!2.12e-18!3;UBERON:0006293!2.12e-18!3;UBERON:0001154!5.42e-15!1;UBERON:0001153!5.42e-15!1;UBERON:0004921!3.71e-11!129;UBERON:0004185!3.71e-11!129;UBERON:0004457!2.04e-10!12;UBERON:0000042!2.04e-10!12;UBERON:0001007!4.49e-09!155;UBERON:0001555!4.49e-09!155;UBERON:0007026!4.49e-09!155;UBERON:0002108!1.20e-08!14;UBERON:0001135!1.48e-08!15;UBERON:0004177!1.99e-08!7;UBERON:0004119!3.25e-08!169;UBERON:0000925!3.25e-08!169;UBERON:0006595!3.25e-08!169;UBERON:0000945!1.76e-07!8;UBERON:0010039!1.76e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.02e-76;17!UBERON:0005409;6.10e-60;22!UBERON:0002108;7.02e-51;4!UBERON:0004921;1.30e-35;33!UBERON:0001154;8.64e-30;1!UBERON:0001153;8.64e-30;1!UBERON:0009854;8.64e-30;1!UBERON:0001155;3.84e-29;9!UBERON:0000059;5.23e-24;11!UBERON:0001555;1.85e-16;54!UBERON:0002114;1.04e-10;2!UBERON:0001007;5.95e-10;81!UBERON:0009856;1.76e-08;4!UBERON:0001242;2.35e-08;4!UBERON:0001262;2.35e-08;4!UBERON:0004786;2.35e-08;4!UBERON:0004808;2.35e-08;4!UBERON:0001277;2.35e-08;4!UBERON:0004907;4.93e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.02e-76,17;UBERON:0005409,4.32e-53,25;UBERON:0002108,7.65e-51,4;UBERON:0001154,9.99e-30,1;UBERON:0001153,9.99e-30,1;UBERON:0001045,9.99e-30,1;UBERON:0001155,3.84e-29,9;UBERON:0000059,5.23e-24,11;UBERON:0004921,7.31e-12,118;UBERON:0002114,1.20e-10,2;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0001242,2.26e-08,4;UBERON:0001262,2.26e-08,4;UBERON:0004786,2.26e-08,4;UBERON:0004808,2.26e-08,4;UBERON:0001277,2.26e-08,4;UBERON:0004907,5.08e-07,5 | |||
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|short_description=p4@NKX2-3 | |||
}} | }} |
Latest revision as of 18:49, 15 September 2015
Short description: | p4@NKX2-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NKX2-3_5end |
Coexpression cluster: | C717_appendix_tonsil_colon_small_plasma_submaxillary_vein |
Association with transcript: | 183bp_to_AK300856_5end |
EntrezGene: | NKX2-3 |
HGNC: | 7836 |
UniProt: | Q8TAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.02e-76 | 17 |
gastrointestinal system | 4.32e-53 | 25 |
small intestine | 7.65e-51 | 4 |
vermiform appendix | 9.99e-30 | 1 |
caecum | 9.99e-30 | 1 |
midgut | 9.99e-30 | 1 |
colon | 3.84e-29 | 9 |
large intestine | 5.23e-24 | 11 |
subdivision of digestive tract | 7.31e-12 | 118 |
duodenum | 1.20e-10 | 2 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
intestinal mucosa | 2.26e-08 | 4 |
wall of intestine | 2.26e-08 | 4 |
gastrointestinal system mucosa | 2.26e-08 | 4 |
gastrointestinal system epithelium | 2.26e-08 | 4 |
intestinal epithelium | 2.26e-08 | 4 |
lower digestive tract | 5.08e-07 | 5 |