FFCP PHASE1:Hg19::chr14:75078662..75078675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3X5 | |UniProt=G3V3X5 | ||
|association_with_transcript=99bp_to_ENST00000556690_5end | |association_with_transcript=99bp_to_ENST00000556690_5end | ||
|cluster_id=chr14:75078662..75078675,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_6_at_LTBP2_5end | |description=CAGE_peak_6_at_LTBP2_5end | ||
|id=chr14:75078662..75078675,- | |id=chr14:75078662..75078675,- | ||
|ontology_enrichment_celltype=CL:0000055!1.34e-25!180;CL:0000057!6.82e-21!75;CL:0000222!4.99e-17!119;CL:0002371!3.90e-15!591;CL:0000220!3.73e-14!246;CL:0002321!1.34e-13!248;CL:0000144!4.99e-13!625;CL:0000183!2.43e-12!59;CL:0000680!5.14e-11!57;CL:0000056!5.14e-11!57;CL:0000355!5.14e-11!57;CL:0000187!3.63e-10!54;CL:0000192!1.28e-09!42;CL:0000514!1.28e-09!42;CL:0000115!1.83e-09!35;CL:0000359!3.12e-09!32;CL:0002620!4.67e-09!23;CL:0002139!1.69e-08!24;CL:0002078!2.73e-08!44;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000548!5.65e-08!679;CL:0000004!5.65e-08!679;CL:0000255!5.65e-08!679;CL:0000071!6.68e-08!18;CL:0002546!6.68e-08!18;CL:0000012!1.81e-07!682;CL:0000213!8.51e-07!57;CL:0000215!8.51e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.34e-25!180;CL:0000057!6.82e-21!75;CL:0000222!4.99e-17!119;CL:0002371!3.90e-15!591;CL:0000220!3.73e-14!246;CL:0002321!1.34e-13!248;CL:0000144!4.99e-13!625;CL:0000183!2.43e-12!59;CL:0000680!5.14e-11!57;CL:0000056!5.14e-11!57;CL:0000355!5.14e-11!57;CL:0000187!3.63e-10!54;CL:0000192!1.28e-09!42;CL:0000514!1.28e-09!42;CL:0000115!1.83e-09!35;CL:0000359!3.12e-09!32;CL:0002620!4.67e-09!23;CL:0002139!1.69e-08!24;CL:0002078!2.73e-08!44;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000548!5.65e-08!679;CL:0000004!5.65e-08!679;CL:0000255!5.65e-08!679;CL:0000071!6.68e-08!18;CL:0002546!6.68e-08!18;CL:0000012!1.81e-07!682;CL:0000213!8.51e-07!57;CL:0000215!8.51e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.92e-10;23!CL:0000359;2.09e-09;32!CL:0000057;3.13e-09;73!CL:0000115;4.52e-09;36!CL:0002139;5.35e-08;24!CL:0000071;1.24e-07;18!CL:0002320;3.12e-07;188!CL:0000192;5.47e-07;43!CL:0002334;7.77e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.93e-23,76;CL:0000222,4.96e-17,121;CL:0002321,6.79e-15,250;CL:0000680,1.73e-10,58;CL:0000056,1.73e-10,58;CL:0000355,1.73e-10,58;CL:0002620,4.33e-10,23;CL:0000359,7.42e-10,32;CL:0000115,8.89e-10,36;CL:0000187,1.43e-09,55;CL:0000192,2.24e-09,43;CL:0000514,2.24e-09,43;CL:0002078,4.87e-09,45;CL:0002139,5.70e-08,24;CL:0000071,1.25e-07,18;CL:0002546,1.25e-07,18;CL:0000393,2.63e-07,61;CL:0000211,2.63e-07,61;CL:0000213,4.66e-07,58;CL:0000215,4.66e-07,58;CL:0002334,8.79e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.24e-07;18!CL:0000514;5.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.76e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.55e-23!79;UBERON:0007798!2.55e-23!79;UBERON:0000055!5.22e-19!69;UBERON:0001981!1.62e-18!60;UBERON:0007500!1.62e-18!60;UBERON:0004537!1.62e-18!60;UBERON:0006965!1.62e-18!60;UBERON:0004872!2.79e-17!84;UBERON:0000914!1.31e-15!83;UBERON:0002329!1.31e-15!83;UBERON:0003077!1.31e-15!83;UBERON:0003059!1.31e-15!83;UBERON:0007282!1.31e-15!83;UBERON:0009618!1.31e-15!83;UBERON:0007285!1.31e-15!83;UBERON:0001637!4.98e-15!42;UBERON:0003509!4.98e-15!42;UBERON:0004572!4.98e-15!42;UBERON:0004535!1.13e-14!110;UBERON:0001009!1.14e-14!113;UBERON:0003914!1.16e-14!118;UBERON:0003102!4.67e-14!95;UBERON:0000475!8.34e-14!365;UBERON:0000119!8.69e-14!312;UBERON:0000468!1.34e-13!659;UBERON:0000486!1.52e-13!82;UBERON:0000483!3.78e-13!309;UBERON:0005256!1.71e-12!143;UBERON:0004573!3.79e-12!33;UBERON:0004571!3.79e-12!33;UBERON:0000467!7.00e-12!625;UBERON:0000480!1.11e-11!626;UBERON:0004290!1.84e-11!70;UBERON:0002100!4.04e-11!216;UBERON:0001444!2.09e-10!48;UBERON:0000477!9.89e-10!286;UBERON:0000490!1.57e-09!138;UBERON:0001134!1.63e-09!61;UBERON:0002036!1.63e-09!61;UBERON:0003082!1.63e-09!61;UBERON:0002385!2.30e-09!63;UBERON:0001015!2.30e-09!63;UBERON:0000383!2.30e-09!63;UBERON:0000947!3.49e-09!21;UBERON:0010191!3.49e-09!21;UBERON:0000481!1.22e-08!347;UBERON:0002097!1.43e-08!40;UBERON:0002199!2.52e-08!45;UBERON:0002416!2.52e-08!45;UBERON:0004111!3.14e-08!241;UBERON:0001986!6.68e-08!18;UBERON:0004638!6.68e-08!18;UBERON:0004852!6.68e-08!18;UBERON:0003104!1.94e-07!238;UBERON:0009142!1.94e-07!238;UBERON:0005085!2.21e-07!29;UBERON:0006914!2.67e-07!25;UBERON:0000487!2.76e-07!22;UBERON:0002050!8.39e-07!605;UBERON:0005423!8.39e-07!605;UBERON:0000923!9.75e-07!604;UBERON:0005291!9.75e-07!604;UBERON:0006598!9.75e-07!604;UBERON:0002532!9.75e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.05e-13;42!UBERON:0003509;6.05e-13;42!UBERON:0004572;6.05e-13;42!UBERON:0004573;2.94e-12;33!UBERON:0004571;2.94e-12;33!UBERON:0007500;4.39e-10;56!UBERON:0001981;4.39e-10;56!UBERON:0004537;4.39e-10;56!UBERON:0002049;1.02e-09;75!UBERON:0007798;1.02e-09;75!UBERON:0003914;1.43e-09;74!UBERON:0000947;1.44e-09;21!UBERON:0010191;1.44e-09;21!UBERON:0000055;2.01e-09;65!UBERON:0004638;1.24e-07;18!UBERON:0001986;1.24e-07;18!UBERON:0004852;1.24e-07;18!UBERON:0002097;1.79e-07;41!UBERON:0006914;2.24e-07;25!UBERON:0000487;3.60e-07;22!UBERON:0001444;4.30e-07;48!UBERON:0002384;8.03e-07;198 | |||
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| ||
|short_description=p6@LTBP2 | |short_description=p6@LTBP2 | ||
}} | }} |
Latest revision as of 01:14, 16 September 2015
Short description: | p6@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 99bp_to_ENST00000556690_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V3X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.93e-23 | 76 |
mesodermal cell | 4.96e-17 | 121 |
embryonic cell | 6.79e-15 | 250 |
muscle precursor cell | 1.73e-10 | 58 |
myoblast | 1.73e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.73e-10 | 58 |
skin fibroblast | 4.33e-10 | 23 |
vascular associated smooth muscle cell | 7.42e-10 | 32 |
endothelial cell | 8.89e-10 | 36 |
muscle cell | 1.43e-09 | 55 |
smooth muscle cell | 2.24e-09 | 43 |
smooth muscle myoblast | 2.24e-09 | 43 |
meso-epithelial cell | 4.87e-09 | 45 |
endothelial cell of vascular tree | 5.70e-08 | 24 |
blood vessel endothelial cell | 1.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-07 | 18 |
electrically responsive cell | 2.63e-07 | 61 |
electrically active cell | 2.63e-07 | 61 |
lining cell | 4.66e-07 | 58 |
barrier cell | 4.66e-07 | 58 |
preadipocyte | 8.79e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.14e-07 | 14 |