FFCP PHASE1:Hg19::chr10:52645379..52645393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29974 | |EntrezGene=29974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24086 | |HGNC=24086 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9F8 | |UniProt=F8W9F8 | ||
|association_with_transcript=0bp_to_ENST00000395489_5end | |association_with_transcript=0bp_to_ENST00000395489_5end | ||
|cluster_id=chr10:52645379..52645393,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_A1CF_5end | |description=CAGE_peak_1_at_A1CF_5end | ||
|id=chr10:52645379..52645393,- | |id=chr10:52645379..52645393,- | ||
|ontology_enrichment_celltype=CL:0000181!1.90e-21!12;CL:0000417!1.90e-21!12;CL:0000668!1.90e-21!12;CL:0000414!1.90e-21!12;CL:0000412!1.90e-21!12;CL:0000182!1.90e-21!12;CL:0002322!2.82e-07!5 | |ontology_enrichment_celltype=CL:0000181!1.90e-21!12;CL:0000417!1.90e-21!12;CL:0000668!1.90e-21!12;CL:0000414!1.90e-21!12;CL:0000412!1.90e-21!12;CL:0000182!1.90e-21!12;CL:0002322!2.82e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.15e-31;12!CL:0002563;7.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-31,12;CL:0000223,1.89e-10,58;CL:0002563,7.64e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.97e-34;11!UBERON:0009497;2.29e-28;13!UBERON:0003104;1.13e-20;31!UBERON:0001041;1.09e-11;30!UBERON:0006242;6.02e-07;1!CL:0000223;6.19e-07;58!UBERON:0001045;6.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.41e-30,19;UBERON:0006925,2.41e-30,19;UBERON:0008836,2.41e-30,19;UBERON:0009854,9.46e-30,23;UBERON:0009497,3.08e-27,25;UBERON:0000015,3.08e-27,25;UBERON:0002423,3.08e-27,25;UBERON:0006235,3.08e-27,25;UBERON:0004161,3.08e-27,25;UBERON:0009856,4.45e-26,26;UBERON:0008835,5.81e-26,22;UBERON:0003894,5.81e-26,22;UBERON:0000160,4.44e-25,17;UBERON:0007499,1.25e-22,25;UBERON:0003929,6.70e-19,54;UBERON:0005172,9.81e-19,54;UBERON:0005173,9.81e-19,54;UBERON:0002365,6.71e-18,31;UBERON:0002330,6.71e-18,31;UBERON:0004921,1.03e-17,118;UBERON:0005409,6.48e-17,25;UBERON:0002417,1.42e-16,60;UBERON:0000916,1.42e-16,60;UBERON:0001155,4.21e-16,9;UBERON:0002368,1.20e-15,35;UBERON:0001007,3.78e-15,145;UBERON:0001555,3.78e-15,145;UBERON:0007026,3.78e-15,145;UBERON:0000949,3.10e-14,45;UBERON:0004119,2.61e-13,160;UBERON:0000925,2.61e-13,160;UBERON:0006595,2.61e-13,160;UBERON:0005911,2.63e-13,82;UBERON:0000059,3.83e-13,11;UBERON:0005177,1.11e-11,101;UBERON:0002108,2.06e-11,4;UBERON:0002530,2.34e-10,59;UBERON:0011216,4.07e-09,223;UBERON:0009569,7.59e-09,112;UBERON:0003104,3.93e-07,160;UBERON:0009142,3.93e-07,160;UBERON:0001154,6.97e-07,1;UBERON:0001153,6.97e-07,1;UBERON:0001045,6.97e-07,1;UBERON:0001301,7.40e-07,1;UBERON:0001242,7.64e-07,4;UBERON:0001262,7.64e-07,4;UBERON:0004786,7.64e-07,4;UBERON:0004808,7.64e-07,4;UBERON:0001277,7.64e-07,4 | |||
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| ||
|short_description=p1@A1CF | |short_description=p1@A1CF | ||
}} | }} |
Latest revision as of 11:22, 18 September 2015
Short description: | p1@A1CF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_A1CF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000395489_5end |
EntrezGene: | A1CF |
HGNC: | 24086 |
UniProt: | F8W9F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.15e-31 | 12 |
endodermal cell | 1.89e-10 | 58 |
intestinal epithelial cell | 7.64e-07 | 4 |