FFCP PHASE1:Hg19::chr10:105845551..105845581,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1308 | |EntrezGene=1308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2194 | |HGNC=2194 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2Y8 | |UniProt=A2A2Y8 | ||
|association_with_transcript=-15bp_to_ENST00000393211_5end | |association_with_transcript=-15bp_to_ENST00000393211_5end | ||
|cluster_id=chr10:105845551..105845581,- | |||
|coexpression_cluster_id=C640 | |||
|description=CAGE_peak_2_at_COL17A1_5end | |description=CAGE_peak_2_at_COL17A1_5end | ||
|id=chr10:105845551..105845581,- | |id=chr10:105845551..105845581,- | ||
|ontology_enrichment_celltype=CL:0002076!1.22e-22!43;CL:0000066!2.41e-19!254;CL:0000223!2.28e-18!59;CL:0002251!2.03e-14!21;CL:0002368!7.85e-12!13;CL:0002159!4.04e-11!13;CL:0000622!1.75e-08!5;CL:0002202!4.04e-07!9;CL:0002632!4.04e-07!9;CL:0000244!4.20e-07!4;CL:0000731!4.20e-07!4;CL:0000076!4.95e-07!62;CL:0000154!6.30e-07!6 | |ontology_enrichment_celltype=CL:0002076!1.22e-22!43;CL:0000066!2.41e-19!254;CL:0000223!2.28e-18!59;CL:0002251!2.03e-14!21;CL:0002368!7.85e-12!13;CL:0002159!4.04e-11!13;CL:0000622!1.75e-08!5;CL:0002202!4.04e-07!9;CL:0002632!4.04e-07!9;CL:0000244!4.20e-07!4;CL:0000731!4.20e-07!4;CL:0000076!4.95e-07!62;CL:0000154!6.30e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.62e-20;42!CL:0002251;2.07e-16;20!CL:0002368;1.47e-15;13!CL:0002159;1.69e-13;14!CL:0000349;5.65e-11;19!CL:0000622;8.76e-11;5!CL:0002202;2.96e-09;9!CL:0002632;2.96e-09;9!CL:0000244;6.02e-09;4!CL:0000731;6.02e-09;4!CL:0000154;7.01e-09;6!CL:0002621;2.30e-07;3!CL:0002541;3.82e-07;3!CL:0002623;4.84e-07;3!CL:0002166;6.57e-07;3!CL:0002577;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.01e-26,42;CL:0000223,5.66e-20,58;CL:0000066,7.85e-20,253;CL:0002251,1.95e-16,20;CL:0002368,1.51e-15,13;CL:0002159,1.70e-13,14;CL:0000349,5.68e-11,19;CL:0000622,8.76e-11,5;CL:0002202,3.02e-09,9;CL:0002632,3.02e-09,9;CL:0000244,5.96e-09,4;CL:0000731,5.96e-09,4;CL:0000154,7.01e-09,6;CL:0000076,3.50e-08,63;CL:0002621,2.31e-07,3;CL:0002077,3.33e-07,34;CL:0002541,3.82e-07,3;CL:0002623,4.84e-07,3;CL:0002166,6.64e-07,3;CL:0002577,8.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;9.26e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!1.78e-17!14 | |ontology_enrichment_disease=DOID:1749!1.78e-17!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.44e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.40e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.72e-24!169;UBERON:0000925!3.72e-24!169;UBERON:0006595!3.72e-24!169;UBERON:0001004!8.57e-18!72;UBERON:0001007!8.40e-16!155;UBERON:0001555!8.40e-16!155;UBERON:0007026!8.40e-16!155;UBERON:0005631!2.16e-14!14;UBERON:0000158!2.16e-14!14;UBERON:0000166!2.26e-14!21;UBERON:0000161!5.38e-14!35;UBERON:0000077!1.30e-13!130;UBERON:0000165!2.09e-12!28;UBERON:0000930!2.09e-12!28;UBERON:0004921!2.74e-12!129;UBERON:0004185!2.74e-12!129;UBERON:0003124!7.90e-11!7;UBERON:0000065!1.18e-10!53;UBERON:0001041!1.07e-09!98;UBERON:0001044!2.02e-08!6;UBERON:0003293!2.02e-08!6;UBERON:0003294!2.02e-08!6;UBERON:0010047!2.02e-08!6;UBERON:0000167!2.02e-08!6;UBERON:0000478!3.38e-08!24;UBERON:0000365!3.70e-08!5;UBERON:0000464!3.85e-08!104;UBERON:0003408!5.48e-08!10;UBERON:0003102!5.66e-08!95;UBERON:0000344!7.00e-08!12;UBERON:0005178!7.76e-08!34;UBERON:0002224!7.76e-08!34;UBERON:0000974!9.35e-08!10;UBERON:0001444!1.20e-07!48;UBERON:0005911!1.22e-07!82;UBERON:0003729!1.26e-07!5;UBERON:0005181!1.76e-07!35;UBERON:0004923!3.52e-07!57;UBERON:0000078!4.81e-07!18;UBERON:0000072!4.84e-07!46;UBERON:0005153!5.72e-07!37;UBERON:0000062!8.26e-07!511 | |ontology_enrichment_uberon=UBERON:0004119!3.72e-24!169;UBERON:0000925!3.72e-24!169;UBERON:0006595!3.72e-24!169;UBERON:0001004!8.57e-18!72;UBERON:0001007!8.40e-16!155;UBERON:0001555!8.40e-16!155;UBERON:0007026!8.40e-16!155;UBERON:0005631!2.16e-14!14;UBERON:0000158!2.16e-14!14;UBERON:0000166!2.26e-14!21;UBERON:0000161!5.38e-14!35;UBERON:0000077!1.30e-13!130;UBERON:0000165!2.09e-12!28;UBERON:0000930!2.09e-12!28;UBERON:0004921!2.74e-12!129;UBERON:0004185!2.74e-12!129;UBERON:0003124!7.90e-11!7;UBERON:0000065!1.18e-10!53;UBERON:0001041!1.07e-09!98;UBERON:0001044!2.02e-08!6;UBERON:0003293!2.02e-08!6;UBERON:0003294!2.02e-08!6;UBERON:0010047!2.02e-08!6;UBERON:0000167!2.02e-08!6;UBERON:0000478!3.38e-08!24;UBERON:0000365!3.70e-08!5;UBERON:0000464!3.85e-08!104;UBERON:0003408!5.48e-08!10;UBERON:0003102!5.66e-08!95;UBERON:0000344!7.00e-08!12;UBERON:0005178!7.76e-08!34;UBERON:0002224!7.76e-08!34;UBERON:0000974!9.35e-08!10;UBERON:0001444!1.20e-07!48;UBERON:0005911!1.22e-07!82;UBERON:0003729!1.26e-07!5;UBERON:0005181!1.76e-07!35;UBERON:0004923!3.52e-07!57;UBERON:0000078!4.81e-07!18;UBERON:0000072!4.84e-07!46;UBERON:0005153!5.72e-07!37;UBERON:0000062!8.26e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.70e-16;19!UBERON:0000166;1.70e-16;19!UBERON:0000165;1.75e-15;28!UBERON:0005631;2.09e-12;10!UBERON:0000158;2.09e-12;10!UBERON:0000478;1.96e-11;24!UBERON:0001044;1.04e-10;6!UBERON:0003293;1.04e-10;6!UBERON:0003294;1.04e-10;6!UBERON:0010047;1.04e-10;6!UBERON:0003408;1.04e-10;6!UBERON:0000167;1.04e-10;6!UBERON:0000365;2.39e-10;5!UBERON:0000974;2.81e-10;6!UBERON:0000486;4.46e-10;12!UBERON:0000344;2.31e-09;20!UBERON:0001041;4.43e-09;14!UBERON:0003729;9.55e-09;13!UBERON:0005910;1.59e-08;6!UBERON:0001987;1.97e-08;4!UBERON:0007196;3.67e-08;15!UBERON:0001558;3.67e-08;15!UBERON:0003343;1.10e-07;4!UBERON:0004785;1.10e-07;4!UBERON:0001949;2.30e-07;3!UBERON:0000305;2.53e-07;7!UBERON:0003124;3.82e-07;3!UBERON:0000920;3.82e-07;3!UBERON:0000153;5.77e-07;54!UBERON:0007811;6.73e-07;52!UBERON:0001004;8.72e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.52e-19,14;UBERON:0000158,5.52e-19,14;UBERON:0004119,8.48e-19,160;UBERON:0000925,8.48e-19,160;UBERON:0006595,8.48e-19,160;UBERON:0000166,3.22e-18,22;UBERON:0001004,1.11e-16,74;UBERON:0000161,1.11e-15,36;UBERON:0000165,8.63e-15,29;UBERON:0000930,8.63e-15,29;UBERON:0003124,6.60e-14,7;UBERON:0000153,1.68e-13,62;UBERON:0007811,1.68e-13,62;UBERON:0003102,3.49e-12,99;UBERON:0000478,1.97e-11,24;UBERON:0000033,7.85e-11,56;UBERON:0001044,1.06e-10,6;UBERON:0003293,1.06e-10,6;UBERON:0003294,1.06e-10,6;UBERON:0010047,1.06e-10,6;UBERON:0000167,1.06e-10,6;UBERON:0003408,2.11e-10,10;UBERON:0000365,2.37e-10,5;UBERON:0001007,2.52e-10,145;UBERON:0001555,2.52e-10,145;UBERON:0007026,2.52e-10,145;UBERON:0000974,4.33e-10,10;UBERON:0004923,1.33e-09,66;UBERON:0000344,2.26e-09,20;UBERON:0001444,3.20e-09,49;UBERON:0003729,9.34e-09,13;UBERON:0005910,1.58e-08,6;UBERON:0001987,1.99e-08,4;UBERON:0004340,1.99e-08,4;UBERON:0000065,3.17e-08,54;UBERON:0007196,3.67e-08,15;UBERON:0001558,3.67e-08,15;UBERON:0008814,5.12e-08,18;UBERON:0003343,1.06e-07,4;UBERON:0004785,1.06e-07,4;UBERON:0001041,1.13e-07,87;UBERON:0001949,2.31e-07,3;UBERON:0000305,2.53e-07,7;UBERON:0000920,3.82e-07,3;UBERON:0006562,6.11e-07,11;UBERON:0004921,8.60e-07,118 | |||
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| ||
|short_description=p2@COL17A1 | |short_description=p2@COL17A1 | ||
}} | }} |
Latest revision as of 05:00, 16 September 2015
Short description: | p2@COL17A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL17A1_5end |
Coexpression cluster: | C640_amniotic_salivary_chorionic_Keratinocyte_Urothelial_Prostate_Mammary |
Association with transcript: | -15bp_to_ENST00000393211_5end |
EntrezGene: | COL17A1 |
HGNC: | 2194 |
UniProt: | A2A2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.01e-26 | 42 |
endodermal cell | 5.66e-20 | 58 |
epithelial cell | 7.85e-20 | 253 |
epithelial cell of alimentary canal | 1.95e-16 | 20 |
respiratory epithelial cell | 1.51e-15 | 13 |
general ecto-epithelial cell | 1.70e-13 | 14 |
extraembryonic cell | 5.68e-11 | 19 |
acinar cell | 8.76e-11 | 5 |
epithelial cell of tracheobronchial tree | 3.02e-09 | 9 |
epithelial cell of lower respiratory tract | 3.02e-09 | 9 |
transitional epithelial cell | 5.96e-09 | 4 |
urothelial cell | 5.96e-09 | 4 |
protein secreting cell | 7.01e-09 | 6 |
squamous epithelial cell | 3.50e-08 | 63 |
gingival epithelial cell | 2.31e-07 | 3 |
ecto-epithelial cell | 3.33e-07 | 34 |
chorionic membrane mesenchymal stem cell | 3.82e-07 | 3 |
acinar cell of salivary gland | 4.84e-07 | 3 |
epithelial cell of Malassez | 6.64e-07 | 3 |
placental epithelial cell | 8.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.40e-20 | 14 |