FFCP PHASE1:Mm9::chr4:130488532..130488559,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=521 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:130488532..130488559,+ | |||
|description=CAGE_peak_at_chr4:130488532..130488559,+ | |description=CAGE_peak_at_chr4:130488532..130488559,+ | ||
|id=chr4:130488532..130488559,+ | |id=chr4:130488532..130488559,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.19e-10!32;CL:0002032!4.19e-10!32;CL:0000037!4.19e-10!32;CL:0000566!4.19e-10!32;CL:0000837!4.19e-10!32;CL:0002031!9.01e-09!25;CL:0000838!1.63e-08!12;CL:0000084!9.98e-08!11;CL:0000827!9.98e-08!11;CL:0000542!1.76e-07!13;CL:0000051!1.76e-07!13;CL:0000738!4.53e-07!17;CL:0002087!4.53e-07!17 | |ontology_enrichment_celltype=CL:0000988!4.19e-10!32;CL:0002032!4.19e-10!32;CL:0000037!4.19e-10!32;CL:0000566!4.19e-10!32;CL:0000837!4.19e-10!32;CL:0002031!9.01e-09!25;CL:0000838!1.63e-08!12;CL:0000084!9.98e-08!11;CL:0000827!9.98e-08!11;CL:0000542!1.76e-07!13;CL:0000051!1.76e-07!13;CL:0000738!4.53e-07!17;CL:0002087!4.53e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.17e-08,32;CL:0002032,2.17e-08,32;CL:0000037,2.17e-08,32;CL:0000837,2.17e-08,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.71e-17!48;UBERON:0002390!6.55e-16!45;UBERON:0003061!6.55e-16!45;UBERON:0004177!7.78e-15!29;UBERON:0002405!7.00e-14!70;UBERON:0002370!1.47e-11!23;UBERON:0000974!1.47e-11!23;UBERON:0004807!1.47e-11!23;UBERON:0005058!1.47e-11!23;UBERON:0003351!1.47e-11!23;UBERON:0009113!1.47e-11!23;UBERON:0003295!1.47e-11!23;UBERON:0009722!1.47e-11!23;UBERON:0005562!1.47e-11!23;UBERON:0007690!1.47e-11!23;UBERON:0003081!3.18e-11!88;UBERON:0006562!1.07e-10!24;UBERON:0003408!1.07e-10!24;UBERON:0001557!1.07e-10!24;UBERON:0001042!1.07e-10!24;UBERON:0008814!1.07e-10!24;UBERON:0009145!1.07e-10!24;UBERON:0005057!3.17e-10!51;UBERON:0000065!7.46e-10!41;UBERON:0001004!2.43e-09!42;UBERON:0000072!1.53e-08!27;UBERON:0001041!5.65e-07!92 | |ontology_enrichment_uberon=UBERON:0002193!1.71e-17!48;UBERON:0002390!6.55e-16!45;UBERON:0003061!6.55e-16!45;UBERON:0004177!7.78e-15!29;UBERON:0002405!7.00e-14!70;UBERON:0002370!1.47e-11!23;UBERON:0000974!1.47e-11!23;UBERON:0004807!1.47e-11!23;UBERON:0005058!1.47e-11!23;UBERON:0003351!1.47e-11!23;UBERON:0009113!1.47e-11!23;UBERON:0003295!1.47e-11!23;UBERON:0009722!1.47e-11!23;UBERON:0005562!1.47e-11!23;UBERON:0007690!1.47e-11!23;UBERON:0003081!3.18e-11!88;UBERON:0006562!1.07e-10!24;UBERON:0003408!1.07e-10!24;UBERON:0001557!1.07e-10!24;UBERON:0001042!1.07e-10!24;UBERON:0008814!1.07e-10!24;UBERON:0009145!1.07e-10!24;UBERON:0005057!3.17e-10!51;UBERON:0000065!7.46e-10!41;UBERON:0001004!2.43e-09!42;UBERON:0000072!1.53e-08!27;UBERON:0001041!5.65e-07!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.88e-23,48;UBERON:0002405,3.88e-23,48;UBERON:0002390,1.77e-22,45;UBERON:0003061,1.77e-22,45;UBERON:0004177,2.27e-22,29;UBERON:0005057,2.27e-22,29;UBERON:0002370,7.24e-20,23;UBERON:0000974,7.24e-20,23;UBERON:0004807,7.24e-20,23;UBERON:0005058,7.24e-20,23;UBERON:0003351,7.24e-20,23;UBERON:0009113,7.24e-20,23;UBERON:0003295,7.24e-20,23;UBERON:0009722,7.24e-20,23;UBERON:0005562,7.24e-20,23;UBERON:0007690,7.24e-20,23;UBERON:0006562,6.71e-19,24;UBERON:0003408,6.71e-19,24;UBERON:0001557,6.71e-19,24;UBERON:0001042,6.71e-19,24;UBERON:0008814,6.71e-19,24;UBERON:0009145,6.71e-19,24;UBERON:0000077,7.84e-18,35;UBERON:0000072,1.98e-16,27;UBERON:0000065,6.90e-13,41;UBERON:0003081,1.53e-12,87;UBERON:0001004,1.72e-12,42;UBERON:0007811,1.69e-11,36;UBERON:0000153,1.89e-10,43;UBERON:0000926,1.52e-07,120;UBERON:0004120,1.52e-07,120;UBERON:0006603,1.52e-07,120;UBERON:0001041,2.31e-07,80 | |||
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|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,0.84473233291,0.70219357896598,0.513653904676515,0.717949430958028,2.9104124088305,3.14713448708391,0.666219523631325,0.809901069559304,0.699561878128147,2.99689057090326,1.50825876966313,0.84877930359606,0.0850432901510698,0.992909512008853,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0.725362142011344,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,7.76813650941515,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,3.5334642953663,1.93950101254089,0,0,0,0,2.15667224110656,0.599902730993408,1.39777249780371,0.149790639404823,0.457500602818626,0,0,0,0,0,0.407357455401265,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,1.0447564995665,0.205782136407943,0,1.40442637462647,0.772043721344145,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,2.40179147216586,0,0,0,0,0,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.956728611944923,0.81931657357869,2.07221978239075,0.867894351489069,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0,2.05045056957423,0.412773735926445,0.555583582109135,0.753473828018764,2.46049609897845,2.0590035588587,3.0596117398894,2.09927178485487,1.79659965945751,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.518459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,5.68820017130721,0.202725215290164,0.718976700153791,1.81889152168913,2.32734704367726,3.57626438606277,3.60586348559907,5.46451250545936,6.5628192466296,6.02033772574499,7.4611377001262,7.40679893622118,6.83104075646339,8.76576766361767,0,0.443971906748129,0,0,0,0,0.73260649706906,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0.701794825336225,0,0,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr4:130488532..130488559,+ | |short_description=p@chr4:130488532..130488559,+ | ||
}} | }} |
Latest revision as of 20:30, 4 August 2015
Short description: | p@chr4:130488532..130488559, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130488532..130488559, + |
Coexpression cluster: | MCL_coexpression_mm9:521 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.17e-08 | 32 |
hematopoietic stem cell | 2.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.17e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.88e-23 | 48 |
immune system | 3.88e-23 | 48 |
hematopoietic system | 1.77e-22 | 45 |
blood island | 1.77e-22 | 45 |
hemopoietic organ | 2.27e-22 | 29 |
immune organ | 2.27e-22 | 29 |
thymus | 7.24e-20 | 23 |
neck | 7.24e-20 | 23 |
respiratory system epithelium | 7.24e-20 | 23 |
hemolymphoid system gland | 7.24e-20 | 23 |
pharyngeal epithelium | 7.24e-20 | 23 |
thymic region | 7.24e-20 | 23 |
pharyngeal gland | 7.24e-20 | 23 |
entire pharyngeal arch endoderm | 7.24e-20 | 23 |
thymus primordium | 7.24e-20 | 23 |
early pharyngeal endoderm | 7.24e-20 | 23 |
pharynx | 6.71e-19 | 24 |
gland of gut | 6.71e-19 | 24 |
upper respiratory tract | 6.71e-19 | 24 |
chordate pharynx | 6.71e-19 | 24 |
pharyngeal arch system | 6.71e-19 | 24 |
pharyngeal region of foregut | 6.71e-19 | 24 |
mixed endoderm/mesoderm-derived structure | 7.84e-18 | 35 |
segment of respiratory tract | 1.98e-16 | 27 |
respiratory tract | 6.90e-13 | 41 |
lateral plate mesoderm | 1.53e-12 | 87 |
respiratory system | 1.72e-12 | 42 |
craniocervical region | 1.69e-11 | 36 |
anterior region of body | 1.89e-10 | 43 |
mesoderm | 1.52e-07 | 120 |
mesoderm-derived structure | 1.52e-07 | 120 |
presumptive mesoderm | 1.52e-07 | 120 |
foregut | 2.31e-07 | 80 |