FFCP PHASE1:Mm9::chr8:77400247..77400251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=574 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:77400247..77400251,+ | |||
|description=CAGE_peak_at_chr8:77400247..77400251,+ | |description=CAGE_peak_at_chr8:77400247..77400251,+ | ||
|id=chr8:77400247..77400251,+ | |id=chr8:77400247..77400251,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.44e-12!9;CL:0002251!1.44e-12!9;CL:0000239!3.76e-09!6;CL:0000677!3.76e-09!6;CL:0000212!3.76e-09!6;CL:0000584!3.76e-09!6;CL:0000075!1.03e-07!7;CL:0000066!1.86e-07!25;CL:0002076!8.96e-07!15 | |ontology_enrichment_celltype=CL:0002563!1.44e-12!9;CL:0002251!1.44e-12!9;CL:0000239!3.76e-09!6;CL:0000677!3.76e-09!6;CL:0000212!3.76e-09!6;CL:0000584!3.76e-09!6;CL:0000075!1.03e-07!7;CL:0000066!1.86e-07!25;CL:0002076!8.96e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.35e-08,6;CL:0000677,6.35e-08,6;CL:0000584,6.35e-08,6;CL:0000075,8.36e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.80e-31!43;UBERON:0005409!4.37e-28!59;UBERON:0000344!1.90e-21!15;UBERON:0001242!2.27e-18!13;UBERON:0000060!2.27e-18!13;UBERON:0001262!2.27e-18!13;UBERON:0004786!2.27e-18!13;UBERON:0003350!1.44e-12!9;UBERON:0004808!1.44e-12!9;UBERON:0001277!1.44e-12!9;UBERON:0004923!7.92e-12!24;UBERON:0001007!6.15e-10!128;UBERON:0001555!6.15e-10!128;UBERON:0007026!6.15e-10!128;UBERON:0000485!6.34e-10!11;UBERON:0004119!1.26e-09!130;UBERON:0000925!1.26e-09!130;UBERON:0006595!1.26e-09!130;UBERON:0004921!1.47e-08!126;UBERON:0004185!1.47e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.51e-49,31;UBERON:0005409,1.85e-34,47;UBERON:0000344,1.72e-18,15;UBERON:0001007,8.60e-14,116;UBERON:0001555,8.60e-14,116;UBERON:0007026,8.60e-14,116;UBERON:0001242,1.38e-13,13;UBERON:0001262,1.38e-13,13;UBERON:0004786,1.38e-13,13;UBERON:0004119,1.79e-13,118;UBERON:0000925,1.79e-13,118;UBERON:0006595,1.79e-13,118;UBERON:0002108,1.77e-12,4;UBERON:0004921,1.89e-11,114;UBERON:0004923,6.72e-11,24;UBERON:0000331,1.79e-09,3;UBERON:0002116,1.79e-09,3;UBERON:0001204,1.79e-09,3;UBERON:0001168,1.79e-09,3;UBERON:0001962,2.25e-07,2;UBERON:0001961,2.25e-07,2;UBERON:0001744,2.25e-07,2;UBERON:0001155,2.42e-07,2;UBERON:0000059,2.42e-07,2 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0.30246421130683,1.50268718983904,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.52350209173887,1.14846392823004,1.29228598847722,0.215471232685889,2.09025761402011,1.00812051903972,1.33038306393183,0,0,0,0.577703239502549,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,4.62586296177317,5.02456076660734,0,1.39342003116263,1.28867461322093,0.403367049246685,1.33426826306922,0.380451252225118,3.32170343081158,1.81168850196412,2.01068167040216,2.38747766449381,2.72949721966768,5.39291645192533,5.83572734661674,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,6.22151871800606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,1.36499771816861,0.30246421130683,1.50268718983904,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.52350209173887,1.14846392823004,1.29228598847722,0.215471232685889,2.09025761402011,1.00812051903972,1.33038306393183,0,0,0,0.577703239502549,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,4.62586296177317,5.02456076660734,0,1.39342003116263,1.28867461322093,0.403367049246685,1.33426826306922,0.380451252225118,3.32170343081158,1.81168850196412,2.01068167040216,2.38747766449381,2.72949721966768,5.39291645192533,5.83572734661674,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,6.22151871800606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:77400247..77400251,+ | |short_description=p@chr8:77400247..77400251,+ | ||
}} | }} |
Latest revision as of 03:03, 4 August 2015
Short description: | p@chr8:77400247..77400251, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:77400247..77400251, + |
Coexpression cluster: | MCL_coexpression_mm9:574 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.35e-08 | 6 |
gut absorptive cell | 6.35e-08 | 6 |
enterocyte | 6.35e-08 | 6 |
columnar/cuboidal epithelial cell | 8.36e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.51e-49 | 31 |
gastrointestinal system | 1.85e-34 | 47 |
mucosa | 1.72e-18 | 15 |
digestive system | 8.60e-14 | 116 |
digestive tract | 8.60e-14 | 116 |
primitive gut | 8.60e-14 | 116 |
intestinal mucosa | 1.38e-13 | 13 |
wall of intestine | 1.38e-13 | 13 |
gastrointestinal system mucosa | 1.38e-13 | 13 |
endoderm-derived structure | 1.79e-13 | 118 |
endoderm | 1.79e-13 | 118 |
presumptive endoderm | 1.79e-13 | 118 |
small intestine | 1.77e-12 | 4 |
subdivision of digestive tract | 1.89e-11 | 114 |
organ component layer | 6.72e-11 | 24 |
ileal mucosa | 1.79e-09 | 3 |
ileum | 1.79e-09 | 3 |
mucosa of small intestine | 1.79e-09 | 3 |
wall of small intestine | 1.79e-09 | 3 |
gut-associated lymphoid tissue | 2.25e-07 | 2 |
mucosa-associated lymphoid tissue | 2.25e-07 | 2 |
lymphoid tissue | 2.25e-07 | 2 |
colon | 2.42e-07 | 2 |
large intestine | 2.42e-07 | 2 |