FFCP PHASE1:Mm9::chr1:107253346..107253365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320311 | |EntrezGene=320311 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BG47 | |UniProt=Q8BG47 | ||
|association_with_transcript=-59bp_to_ENSMUST00000058688,ENSMUST00000172299,NM_001160368,NM_178779,uc011wpy.1,uc011wpz.1_5end | |association_with_transcript=-59bp_to_ENSMUST00000058688,ENSMUST00000172299,NM_001160368,NM_178779,uc011wpy.1,uc011wpz.1_5end | ||
|cluster_id=chr1:107253346..107253365,- | |||
|description=CAGE_peak_7_at_Rnf152_5end | |description=CAGE_peak_7_at_Rnf152_5end | ||
|id=chr1:107253346..107253365,- | |id=chr1:107253346..107253365,- | ||
|ontology_enrichment_celltype=CL:0000117!3.17e-07!23;CL:0000337!3.17e-07!23 | |ontology_enrichment_celltype=CL:0000117!3.17e-07!23;CL:0000337!3.17e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-14,23;CL:0000337,1.36e-14,23;CL:0002612,2.68e-14,3;CL:0002613,1.84e-13,3;CL:0000540,8.72e-10,33;CL:0000047,8.72e-10,33;CL:0000031,8.72e-10,33;CL:0000404,8.72e-10,33;CL:0000393,4.41e-08,39;CL:0000211,4.41e-08,39;CL:0002319,3.29e-07,43;CL:0000221,5.13e-07,44;CL:0000133,5.13e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.86e-07!12;UBERON:0003057!2.86e-07!12;UBERON:0001049!7.00e-07!52;UBERON:0005068!7.00e-07!52;UBERON:0006241!7.00e-07!52;UBERON:0007135!7.00e-07!52 | |ontology_enrichment_uberon=UBERON:0003076!2.86e-07!12;UBERON:0003057!2.86e-07!12;UBERON:0001049!7.00e-07!52;UBERON:0005068!7.00e-07!52;UBERON:0006241!7.00e-07!52;UBERON:0007135!7.00e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,6.57e-15,5;UBERON:0002315,6.57e-15,5;UBERON:0002257,2.68e-14,3;UBERON:0002240,1.87e-12,6;UBERON:0005174,1.87e-12,6;UBERON:0001137,1.87e-12,6;UBERON:0001155,3.07e-10,2;UBERON:0000059,3.07e-10,2;UBERON:0003076,2.35e-09,12;UBERON:0003057,2.35e-09,12;UBERON:0002020,2.50e-09,34;UBERON:0002420,6.30e-09,8;UBERON:0007245,6.30e-09,8;UBERON:0010009,6.30e-09,8;UBERON:0010011,6.30e-09,8;UBERON:0000454,6.30e-09,8;UBERON:0000369,2.75e-08,5;UBERON:0002435,2.75e-08,5;UBERON:0000204,2.75e-08,5;UBERON:0010082,2.75e-08,5;UBERON:0001049,4.85e-07,52;UBERON:0005068,4.85e-07,52;UBERON:0006241,4.85e-07,52;UBERON:0007135,4.85e-07,52 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,1.20985684522732,1.00179145989269,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,1.14846392823004,0.86152399231815,0.646413698057667,2.47030445293286,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,1.99955689082663,0.662605622854841,0,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,1.84640802822271,1.00636407962651,1.04182674111352,1.67509799400829,0,0.61119299110724,2.65165726926301,2.13557521198654,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0.896053774194671,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,5.59175283654366,0.878342391034642,0.628340120440365,1.27728527604296,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0.62336413367868,0.811206315338788,0,0,0,0.420883711772948,0,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,1.32167513193519,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.380451252225118,0.949058123089023,0.658795818896044,0,0,0,0,0.648414149624083,0,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.758838445491087,0.738050739898011,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.318909537314974,0,0,0,0,0,0,0,1.28440471990234,0.468846746368813,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.656563598980245,0.874442509889552,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,3.49960427887841,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0.697950815278722,0.909998478779072,1.20985684522732,1.00179145989269,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,1.14846392823004,0.86152399231815,0.646413698057667,2.47030445293286,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,1.99955689082663,0.662605622854841,0,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,1.84640802822271,1.00636407962651,1.04182674111352,1.67509799400829,0,0.61119299110724,2.65165726926301,2.13557521198654,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0.896053774194671,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,5.59175283654366,0.878342391034642,0.628340120440365,1.27728527604296,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0.62336413367868,0.811206315338788,0,0,0,0.420883711772948,0,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,1.32167513193519,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.380451252225118,0.949058123089023,0.658795818896044,0,0,0,0,0.648414149624083,0,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.758838445491087,0.738050739898011,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.318909537314974,0,0,0,0,0,0,0,1.28440471990234,0.468846746368813,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.656563598980245,0.874442509889552,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,3.49960427887841,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p7@Rnf152 | |short_description=p7@Rnf152 | ||
}} | }} |
Latest revision as of 05:30, 26 September 2015
Short description: | p7@Rnf152 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rnf152_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENSMUST00000058688, ENSMUST00000172299, NM_001160368, NM_178779, uc011wpy.1, uc011wpz.1_5end |
EntrezGene: | Rnf152 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-14 | 23 |
neuron of the ventral spinal cord | 2.68e-14 | 3 |
striatum neuron | 1.84e-13 | 3 |
neuron | 8.72e-10 | 33 |
neuronal stem cell | 8.72e-10 | 33 |
neuroblast | 8.72e-10 | 33 |
electrically signaling cell | 8.72e-10 | 33 |
electrically responsive cell | 4.41e-08 | 39 |
electrically active cell | 4.41e-08 | 39 |
neural cell | 3.29e-07 | 43 |
ectodermal cell | 5.13e-07 | 44 |
neurectodermal cell | 5.13e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 6.57e-15 | 5 |
gray matter of spinal cord | 6.57e-15 | 5 |
ventral horn of spinal cord | 2.68e-14 | 3 |
spinal cord | 1.87e-12 | 6 |
dorsal region element | 1.87e-12 | 6 |
dorsum | 1.87e-12 | 6 |
colon | 3.07e-10 | 2 |
large intestine | 3.07e-10 | 2 |
posterior neural tube | 2.35e-09 | 12 |
chordal neural plate | 2.35e-09 | 12 |
gray matter | 2.50e-09 | 34 |
basal ganglion | 6.30e-09 | 8 |
nuclear complex of neuraxis | 6.30e-09 | 8 |
aggregate regional part of brain | 6.30e-09 | 8 |
collection of basal ganglia | 6.30e-09 | 8 |
cerebral subcortex | 6.30e-09 | 8 |
corpus striatum | 2.75e-08 | 5 |
striatum | 2.75e-08 | 5 |
ventral part of telencephalon | 2.75e-08 | 5 |
future corpus striatum | 2.75e-08 | 5 |
neural tube | 4.85e-07 | 52 |
neural rod | 4.85e-07 | 52 |
future spinal cord | 4.85e-07 | 52 |
neural keel | 4.85e-07 | 52 |