FFCP PHASE1:Mm9::chr8:120027901..120027907,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=331 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:120027901..120027907,+ | |||
|description=CAGE_peak_at_chr8:120027901..120027907,+ | |description=CAGE_peak_at_chr8:120027901..120027907,+ | ||
|id=chr8:120027901..120027907,+ | |id=chr8:120027901..120027907,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.34e-08!9;CL:0002251!2.34e-08!9;CL:0002250!2.82e-07!3;CL:0000473!4.70e-07!3;CL:0000627!4.70e-07!3;CL:0000682!4.70e-07!3 | |ontology_enrichment_celltype=CL:0002563!2.34e-08!9;CL:0002251!2.34e-08!9;CL:0002250!2.82e-07!3;CL:0000473!4.70e-07!3;CL:0000627!4.70e-07!3;CL:0000682!4.70e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,9.81e-15,3;CL:0000682,3.16e-14,3;CL:0002563,1.99e-13,9;CL:0002251,1.99e-13,9;CL:0000066,3.55e-11,25;CL:0002076,5.54e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.44e-15!59;UBERON:0000344!2.18e-15!15;UBERON:0000160!2.09e-14!43;UBERON:0004923!9.43e-14!24;UBERON:0001242!8.73e-12!13;UBERON:0000060!8.73e-12!13;UBERON:0001262!8.73e-12!13;UBERON:0004786!8.73e-12!13;UBERON:0004119!1.43e-11!130;UBERON:0000925!1.43e-11!130;UBERON:0006595!1.43e-11!130;UBERON:0001007!5.79e-11!128;UBERON:0001555!5.79e-11!128;UBERON:0007026!5.79e-11!128;UBERON:0004921!2.83e-09!126;UBERON:0004185!2.83e-09!126;UBERON:0003350!2.34e-08!9;UBERON:0004808!2.34e-08!9;UBERON:0001277!2.34e-08!9;UBERON:0002465!3.56e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.44e-20,15;UBERON:0000160,8.86e-17,31;UBERON:0005409,5.25e-15,47;UBERON:0003350,1.99e-13,9;UBERON:0004808,1.99e-13,9;UBERON:0001277,1.99e-13,9;UBERON:0001242,4.00e-13,13;UBERON:0001262,4.00e-13,13;UBERON:0004786,4.00e-13,13;UBERON:0004923,4.04e-12,24;UBERON:0000485,5.88e-11,11;UBERON:0001962,5.96e-11,2;UBERON:0001961,5.96e-11,2;UBERON:0001744,5.96e-11,2;UBERON:0001155,3.79e-10,2;UBERON:0000059,3.79e-10,2;UBERON:0002465,1.42e-07,3;UBERON:0001007,6.57e-07,116;UBERON:0001555,6.57e-07,116;UBERON:0007026,6.57e-07,116;UBERON:0004119,9.48e-07,118;UBERON:0000925,9.48e-07,118;UBERON:0006595,9.48e-07,118 | |||
|phase1_expression=0,0,0.454999239389536,0,0,20.8170297170743,17.0537227634734,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,5.59973479776923,6.65286915094793,1.14846392823004,3.01533397311352,1.72376986148711,0.190023419456374,0,0.221730510655305,0,0,0,4.04392267651784,1.82858109894342,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0.793351699990633,0,0,0,0,0,0.190225626112559,1.42358718463353,0,0,0.198956472041151,0,0.898819408654221,1.08069024937347,2.38969527905241,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.874442509889552,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,4.77335309007557,0,0,0,0,0,0,0,2.09404753587224,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,20.8170297170743,17.0537227634734,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,5.59973479776923,6.65286915094793,1.14846392823004,3.01533397311352,1.72376986148711,0.190023419456374,0,0.221730510655305,0,0,0,4.04392267651784,1.82858109894342,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0.793351699990633,0,0,0,0,0,0.190225626112559,1.42358718463353,0,0,0.198956472041151,0,0.898819408654221,1.08069024937347,2.38969527905241,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.874442509889552,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,4.77335309007557,0,0,0,0,0,0,0,2.09404753587224,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr8:120027901..120027907,+ | |short_description=p@chr8:120027901..120027907,+ | ||
}} | }} |
Latest revision as of 00:23, 6 August 2015
Short description: | p@chr8:120027901..120027907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:120027901..120027907, + |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 9.81e-15 | 3 |
M cell of gut | 3.16e-14 | 3 |
intestinal epithelial cell | 1.99e-13 | 9 |
epithelial cell of alimentary canal | 1.99e-13 | 9 |
epithelial cell | 3.55e-11 | 25 |
endo-epithelial cell | 5.54e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.44e-20 | 15 |
intestine | 8.86e-17 | 31 |
gastrointestinal system | 5.25e-15 | 47 |
epithelium of mucosa | 1.99e-13 | 9 |
gastrointestinal system epithelium | 1.99e-13 | 9 |
intestinal epithelium | 1.99e-13 | 9 |
intestinal mucosa | 4.00e-13 | 13 |
wall of intestine | 4.00e-13 | 13 |
gastrointestinal system mucosa | 4.00e-13 | 13 |
organ component layer | 4.04e-12 | 24 |
simple columnar epithelium | 5.88e-11 | 11 |
gut-associated lymphoid tissue | 5.96e-11 | 2 |
mucosa-associated lymphoid tissue | 5.96e-11 | 2 |
lymphoid tissue | 5.96e-11 | 2 |
colon | 3.79e-10 | 2 |
large intestine | 3.79e-10 | 2 |
lymphoid system | 1.42e-07 | 3 |
digestive system | 6.57e-07 | 116 |
digestive tract | 6.57e-07 | 116 |
primitive gut | 6.57e-07 | 116 |
endoderm-derived structure | 9.48e-07 | 118 |
endoderm | 9.48e-07 | 118 |
presumptive endoderm | 9.48e-07 | 118 |