FFCP PHASE1:Mm9::chr7:121989839..121989852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:121989839..121989852,+ | |||
|description=CAGE_peak_at_chr7:121989839..121989852,+ | |description=CAGE_peak_at_chr7:121989839..121989852,+ | ||
|id=chr7:121989839..121989852,+ | |id=chr7:121989839..121989852,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.63e-26!9;CL:0002251!2.63e-26!9;CL:0000239!3.00e-17!6;CL:0000677!3.00e-17!6;CL:0000212!3.00e-17!6;CL:0000584!3.00e-17!6;CL:0000066!9.46e-16!25;CL:0002076!3.66e-15!15;CL:0000075!1.05e-14!7;CL:0000223!5.55e-11!20;CL:0002250!1.19e-10!3;CL:0000473!1.28e-10!3;CL:0000627!1.28e-10!3;CL:0000682!1.28e-10!3 | |ontology_enrichment_celltype=CL:0002563!2.63e-26!9;CL:0002251!2.63e-26!9;CL:0000239!3.00e-17!6;CL:0000677!3.00e-17!6;CL:0000212!3.00e-17!6;CL:0000584!3.00e-17!6;CL:0000066!9.46e-16!25;CL:0002076!3.66e-15!15;CL:0000075!1.05e-14!7;CL:0000223!5.55e-11!20;CL:0002250!1.19e-10!3;CL:0000473!1.28e-10!3;CL:0000627!1.28e-10!3;CL:0000682!1.28e-10!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.75e-22,9;CL:0002251,1.75e-22,9;CL:0000066,8.37e-16,25;CL:0002250,3.64e-14,3;CL:0000682,4.02e-14,3;CL:0002076,3.36e-13,15;CL:0000239,4.06e-11,6;CL:0000677,4.06e-11,6;CL:0000584,4.06e-11,6;CL:0000223,1.04e-09,20;CL:0000075,1.48e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.89e-44!15;UBERON:0001242!6.40e-38!13;UBERON:0000060!6.40e-38!13;UBERON:0001262!6.40e-38!13;UBERON:0004786!6.40e-38!13;UBERON:0000160!1.35e-32!43;UBERON:0003350!2.63e-26!9;UBERON:0004808!2.63e-26!9;UBERON:0001277!2.63e-26!9;UBERON:0004923!3.08e-26!24;UBERON:0005409!1.01e-24!59;UBERON:0000485!3.04e-21!11;UBERON:0001007!4.91e-11!128;UBERON:0001555!4.91e-11!128;UBERON:0007026!4.91e-11!128;UBERON:0004119!8.70e-11!130;UBERON:0000925!8.70e-11!130;UBERON:0006595!8.70e-11!130;UBERON:0000331!3.22e-10!3;UBERON:0002116!3.22e-10!3;UBERON:0001204!3.22e-10!3;UBERON:0001168!3.22e-10!3;UBERON:0004921!5.22e-09!126;UBERON:0004185!5.22e-09!126;UBERON:0001962!2.21e-07!2;UBERON:0001961!2.21e-07!2;UBERON:0001744!2.21e-07!2;UBERON:0001155!2.37e-07!2;UBERON:0000059!2.37e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.45e-46,15;UBERON:0001242,6.12e-38,13;UBERON:0001262,6.12e-38,13;UBERON:0004786,6.12e-38,13;UBERON:0000160,2.97e-32,31;UBERON:0004923,5.66e-28,24;UBERON:0003350,1.75e-22,9;UBERON:0004808,1.75e-22,9;UBERON:0001277,1.75e-22,9;UBERON:0005409,2.12e-20,47;UBERON:0000485,2.87e-18,11;UBERON:0000331,1.45e-13,3;UBERON:0002116,1.45e-13,3;UBERON:0001204,1.45e-13,3;UBERON:0001168,1.45e-13,3;UBERON:0002108,2.66e-10,4;UBERON:0001962,1.22e-09,2;UBERON:0001961,1.22e-09,2;UBERON:0001744,1.22e-09,2;UBERON:0001155,1.35e-09,2;UBERON:0000059,1.35e-09,2;UBERON:0001007,5.83e-09,116;UBERON:0001555,5.83e-09,116;UBERON:0007026,5.83e-09,116;UBERON:0004119,9.31e-09,118;UBERON:0000925,9.31e-09,118;UBERON:0006595,9.31e-09,118;UBERON:0004921,8.13e-07,114 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,0.60492842261366,0.500895729946347,2.51818907867835,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.89995777814189,4.01962374880514,5.59990595006797,5.817723282519,2.66032787238923,2.77233142735924,10.199603490144,0,0,0,6.06588401477677,4.82080471539628,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,1.58670339998127,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0,1.51296634912286,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,2.27499619694768,0.60492842261366,0.500895729946347,2.51818907867835,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.89995777814189,4.01962374880514,5.59990595006797,5.817723282519,2.66032787238923,2.77233142735924,10.199603490144,0,0,0,6.06588401477677,4.82080471539628,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,1.58670339998127,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0,1.51296634912286,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:121989839..121989852,+ | |short_description=p@chr7:121989839..121989852,+ | ||
}} | }} |
Latest revision as of 02:21, 4 August 2015
Short description: | p@chr7:121989839..121989852, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:121989839..121989852, + |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.75e-22 | 9 |
epithelial cell of alimentary canal | 1.75e-22 | 9 |
epithelial cell | 8.37e-16 | 25 |
intestinal crypt stem cell | 3.64e-14 | 3 |
M cell of gut | 4.02e-14 | 3 |
endo-epithelial cell | 3.36e-13 | 15 |
brush border epithelial cell | 4.06e-11 | 6 |
gut absorptive cell | 4.06e-11 | 6 |
enterocyte | 4.06e-11 | 6 |
endodermal cell | 1.04e-09 | 20 |
columnar/cuboidal epithelial cell | 1.48e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.45e-46 | 15 |
intestinal mucosa | 6.12e-38 | 13 |
wall of intestine | 6.12e-38 | 13 |
gastrointestinal system mucosa | 6.12e-38 | 13 |
intestine | 2.97e-32 | 31 |
organ component layer | 5.66e-28 | 24 |
epithelium of mucosa | 1.75e-22 | 9 |
gastrointestinal system epithelium | 1.75e-22 | 9 |
intestinal epithelium | 1.75e-22 | 9 |
gastrointestinal system | 2.12e-20 | 47 |
simple columnar epithelium | 2.87e-18 | 11 |
ileal mucosa | 1.45e-13 | 3 |
ileum | 1.45e-13 | 3 |
mucosa of small intestine | 1.45e-13 | 3 |
wall of small intestine | 1.45e-13 | 3 |
small intestine | 2.66e-10 | 4 |
gut-associated lymphoid tissue | 1.22e-09 | 2 |
mucosa-associated lymphoid tissue | 1.22e-09 | 2 |
lymphoid tissue | 1.22e-09 | 2 |
colon | 1.35e-09 | 2 |
large intestine | 1.35e-09 | 2 |
digestive system | 5.83e-09 | 116 |
digestive tract | 5.83e-09 | 116 |
primitive gut | 5.83e-09 | 116 |
endoderm-derived structure | 9.31e-09 | 118 |
endoderm | 9.31e-09 | 118 |
presumptive endoderm | 9.31e-09 | 118 |
subdivision of digestive tract | 8.13e-07 | 114 |