FFCP PHASE1:Mm9::chr8:36889475..36889484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71908 | |EntrezGene=71908 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7D7,Q3ULX4 | |UniProt=Q9D7D7,Q3ULX4 | ||
|association_with_transcript=128bp_to_ENSMUST00000060128,NM_027998,uc009llc.2_5end | |association_with_transcript=128bp_to_ENSMUST00000060128,NM_027998,uc009llc.2_5end | ||
|cluster_id=chr8:36889475..36889484,- | |||
|description=CAGE_peak_2_at_Cldn23_5end | |description=CAGE_peak_2_at_Cldn23_5end | ||
|id=chr8:36889475..36889484,- | |id=chr8:36889475..36889484,- | ||
|ontology_enrichment_celltype=CL:0002563!4.52e-12!9;CL:0002251!4.52e-12!9;CL:0000066!3.80e-11!25;CL:0000075!6.22e-10!7;CL:0000239!4.69e-09!6;CL:0000677!4.69e-09!6;CL:0000212!4.69e-09!6;CL:0000584!4.69e-09!6;CL:0002076!6.23e-09!15;CL:0000223!5.71e-07!20 | |ontology_enrichment_celltype=CL:0002563!4.52e-12!9;CL:0002251!4.52e-12!9;CL:0000066!3.80e-11!25;CL:0000075!6.22e-10!7;CL:0000239!4.69e-09!6;CL:0000677!4.69e-09!6;CL:0000212!4.69e-09!6;CL:0000584!4.69e-09!6;CL:0002076!6.23e-09!15;CL:0000223!5.71e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.00e-27,6;CL:0000677,9.00e-27,6;CL:0000584,9.00e-27,6;CL:0002563,1.32e-23,9;CL:0002251,1.32e-23,9;CL:0000075,6.92e-23,7;CL:0002076,7.43e-14,15;CL:0000066,4.23e-13,25;CL:0000223,3.46e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.23e-18!15;UBERON:0005409!2.78e-16!59;UBERON:0001242!4.10e-16!13;UBERON:0000060!4.10e-16!13;UBERON:0001262!4.10e-16!13;UBERON:0004786!4.10e-16!13;UBERON:0000160!4.65e-14!43;UBERON:0000485!1.30e-13!11;UBERON:0003350!4.52e-12!9;UBERON:0004808!4.52e-12!9;UBERON:0001277!4.52e-12!9;UBERON:0004923!5.49e-11!24;UBERON:0001007!5.29e-09!128;UBERON:0001555!5.29e-09!128;UBERON:0007026!5.29e-09!128;UBERON:0004119!1.16e-08!130;UBERON:0000925!1.16e-08!130;UBERON:0006595!1.16e-08!130;UBERON:0004921!6.79e-08!126;UBERON:0004185!6.79e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.77e-33,15;UBERON:0001242,3.17e-26,13;UBERON:0001262,3.17e-26,13;UBERON:0004786,3.17e-26,13;UBERON:0003350,1.32e-23,9;UBERON:0004808,1.32e-23,9;UBERON:0001277,1.32e-23,9;UBERON:0004923,3.71e-20,24;UBERON:0000485,3.54e-19,11;UBERON:0000160,2.21e-15,31;UBERON:0005409,1.91e-13,47;UBERON:0001155,1.49e-09,2;UBERON:0000059,1.49e-09,2;UBERON:0001962,4.75e-09,2;UBERON:0001961,4.75e-09,2;UBERON:0001744,4.75e-09,2;UBERON:0001007,7.79e-07,116;UBERON:0001555,7.79e-07,116;UBERON:0007026,7.79e-07,116 | |||
|phase1_expression=0.320297694209588,2.09385244583617,3.63999391511629,3.62957053568196,9.5170188689806,4.02910252588535,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.83527424853736,2.8711598205751,0.86152399231815,2.15471232685889,0.380046838912748,1.00812051903972,0.886922042621219,0,0,0,1.73310971850765,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,1.66828349535359,1.39300866608867,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,0,0.213288250535234,0,0.77320476793256,0.201683524623343,0,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.779856348476481,0,0.864552199498777,0.597423819763102,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.16488625294148,1.13025098687134,0.72375509913787,0.477489376012546,0.984845398470368,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,1.21377911746339,0.41326727862668,0.523511883968059,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0.772758376128762,0,0.36630324853453,3.42989406526505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0.999242311751784,0,0.859484216193193,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.320297694209588,2.09385244583617,3.63999391511629,3.62957053568196,9.5170188689806,4.02910252588535,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.83527424853736,2.8711598205751,0.86152399231815,2.15471232685889,0.380046838912748,1.00812051903972,0.886922042621219,0,0,0,1.73310971850765,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,1.66828349535359,1.39300866608867,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,0,0.213288250535234,0,0.77320476793256,0.201683524623343,0,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.779856348476481,0,0.864552199498777,0.597423819763102,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.16488625294148,1.13025098687134,0.72375509913787,0.477489376012546,0.984845398470368,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,1.21377911746339,0.41326727862668,0.523511883968059,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0.772758376128762,0,0.36630324853453,3.42989406526505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0.999242311751784,0,0.859484216193193,0.382576664137687,0.220591419119515,0 | ||
|short_description=p2@Cldn23 | |short_description=p2@Cldn23 | ||
}} | }} |
Latest revision as of 23:05, 1 October 2015
Short description: | p2@Cldn23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cldn23_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 128bp_to_ENSMUST00000060128, NM_027998, uc009llc.2_5end |
EntrezGene: | Cldn23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.00e-27 | 6 |
gut absorptive cell | 9.00e-27 | 6 |
enterocyte | 9.00e-27 | 6 |
intestinal epithelial cell | 1.32e-23 | 9 |
epithelial cell of alimentary canal | 1.32e-23 | 9 |
columnar/cuboidal epithelial cell | 6.92e-23 | 7 |
endo-epithelial cell | 7.43e-14 | 15 |
epithelial cell | 4.23e-13 | 25 |
endodermal cell | 3.46e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.77e-33 | 15 |
intestinal mucosa | 3.17e-26 | 13 |
wall of intestine | 3.17e-26 | 13 |
gastrointestinal system mucosa | 3.17e-26 | 13 |
epithelium of mucosa | 1.32e-23 | 9 |
gastrointestinal system epithelium | 1.32e-23 | 9 |
intestinal epithelium | 1.32e-23 | 9 |
organ component layer | 3.71e-20 | 24 |
simple columnar epithelium | 3.54e-19 | 11 |
intestine | 2.21e-15 | 31 |
gastrointestinal system | 1.91e-13 | 47 |
colon | 1.49e-09 | 2 |
large intestine | 1.49e-09 | 2 |
gut-associated lymphoid tissue | 4.75e-09 | 2 |
mucosa-associated lymphoid tissue | 4.75e-09 | 2 |
lymphoid tissue | 4.75e-09 | 2 |
digestive system | 7.79e-07 | 116 |
digestive tract | 7.79e-07 | 116 |
primitive gut | 7.79e-07 | 116 |