FFCP PHASE1:Mm9::chr2:11093983..11093994,+: Difference between revisions
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{{FFCP|EntrezGene=18761|HGNC=|MCL_coexpression_id=40|UniProt=Q02111,A6H667,B1AYX8,Q8CAV6|association_with_transcript=-14bp_to_ENSMUST00000028118,NM_008859,uc008iia.1,uc008iib.1,uc008iic.1_5end|description=CAGE_peak_9_at_Prkcq_5end|id=chr2:11093983..11093994,+|ontology_enrichment_celltype=CL:0000791!8.42e-08!9;CL:0000789!8.42e-08!9;CL:0002420!8.42e-08!9;CL:0002419!8.42e-08!9;CL:0000790!8.42e-08!9;CL:0000624!5.56e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,6.02e-14,9;CL:0000789,6.02e-14,9;CL:0002420,6.02e-14,9;CL:0002419,6.02e-14,9;CL:0000790,6.02e-14,9;CL:0000624,1.45e-11,8;CL:0000084,3.33e-11,11;CL:0000827,3.33e-11,11;CL:0000838,3.55e-10,12;CL:0000542,2.63e-09,13;CL:0000051,2.63e-09,13;CL:0000893,4.31e-07,6;CL:0002489,4.31e-07,6;CL:0000898,4.31e-07,6;CL:0000809,4.31e-07,6;CL:0000810,4.31e-07,6;CL:0000895,4.31e-07,6;CL:0000808,4.31e-07,6;CL:0000894,4.31e-07,6;CL:0000806,4.31e-07,6;CL:0000807,4.31e-07,6;CL:0000805,4.31e-07,6;CL:0002425,4.31e-07,6;CL:0002436,4.31e-07,6;CL:0002427,4.31e-07,6;CL:0002428,4.31e-07,6;CL:0002429,4.31e-07,6;CL:0002433,4.31e-07,6;CL:0002431,4.31e-07,6;CL:0002432,4.31e-07,6;CL:0000738,7.45e-07,17;CL:0002087,7.45e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!1.36e-11!24;UBERON:0001557!1.36e-11!24;UBERON:0001042!1.36e-11!24;UBERON:0008814!1.36e-11!24;UBERON:0009145!1.36e-11!24;UBERON:0002370!7.66e-11!23;UBERON:0000974!7.66e-11!23;UBERON:0004807!7.66e-11!23;UBERON:0005058!7.66e-11!23;UBERON:0003351!7.66e-11!23;UBERON:0009113!7.66e-11!23;UBERON:0003295!7.66e-11!23;UBERON:0009722!7.66e-11!23;UBERON:0005562!7.66e-11!23;UBERON:0007690!7.66e-11!23;UBERON:0003408!5.45e-10!24;UBERON:0000072!3.44e-09!27;UBERON:0004177!8.60e-09!29;UBERON:0000065!9.28e-08!41;UBERON:0000063!1.80e-07!35;UBERON:0001004!2.61e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0006562,1.00e-23,24;UBERON:0001557,1.00e-23,24;UBERON:0001042,1.00e-23,24;UBERON:0008814,1.00e-23,24;UBERON:0009145,1.00e-23,24;UBERON:0002370,1.43e-21,23;UBERON:0000974,1.43e-21,23;UBERON:0004807,1.43e-21,23;UBERON:0005058,1.43e-21,23;UBERON:0003351,1.43e-21,23;UBERON:0009113,1.43e-21,23;UBERON:0003295,1.43e-21,23;UBERON:0009722,1.43e-21,23;UBERON:0005562,1.43e-21,23;UBERON:0007690,1.43e-21,23;UBERON:0000072,1.14e-20,27;UBERON:0003408,1.59e-20,24;UBERON:0007811,1.45e-16,36;UBERON:0004177,2.20e-16,29;UBERON:0005057,2.20e-16,29;UBERON:0000065,8.20e-16,41;UBERON:0001004,2.46e-15,42;UBERON:0000077,7.87e-15,35;UBERON:0000153,3.19e-13,43;UBERON:0002193,1.92e-11,48;UBERON:0002405,1.92e-11,48;UBERON:0002390,9.23e-11,45;UBERON:0003061,9.23e-11,45;UBERON:0003929,3.99e-08,55;UBERON:0005911,1.33e-07,69;UBERON:0002368,3.69e-07,60;UBERON:0003081,4.57e-07,87;UBERON:0001041,5.57e-07,80|phase1_expression=0.160148847104794,0,0,0,0,0,0,7.48915275961142,0.84473233291,1.17032263160997,1.36974374580404,0.797721589953364,11.1280474455284,7.34331380319578,0,0.404950534779652,0.699561878128147,1.26184866143295,0.822686601634433,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,3.62681071005672,9.07453257684653,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.638436690425939,1.0752457327937,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,0.45839474333043,1.17851434189467,0.284743361598206,0.372798891650601,0.151452386666368,0.68014404096107,1.15945795480671,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,4.66088190564909,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0,0.144599356919912,2.65383165584962,0.808834249737046,1.54589062922275,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0,0.149790639404823,0.457500602818626,0,0.521472960576829,0,0.62336413367868,1.46017136760982,0,0.622034853050465,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.187403449119458,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.292399974850665,0,0.536825675041487,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0.775809948670503,0.0701358198903186,0.69560190836683,0.442830443938806,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0,0.630540576424764,0,0.637819074629948,1.14704320301017,1.20879487306127,0.433947175744535,0,0,0,0,0.80275294993896,1.64096361229084,0,3.02965112645248,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0,0,0.98931751764888,0.484393280087717,0.120625849856312,0.119372344003136,0.164140899745061,0,1.66882771809459,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0.69975726161829,0.552799895217695,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,3.16011120628178,0.202725215290164,0.924398614483445,0.77952493786677,1.25318686967237,2.58285761215644,1.9231271923195,1.32920574457119,1.00966449948148,1.37172251979,1.71404514732629,1.75424185331554,2.5977197242889,2.33753804363138,3.40095575422817,0,0,0,0.965947970160952,0,0.183151624267265,0,0,0,0,0,0.515559547031063,1.37016503954128,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,1.11123363900808,0.412070114477788,0,0,0,0.565879024158229,0,0.320125762024346,0.402048282689293,0,0.579421629724277,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.436039249896986,0.188218760830661,0.423073039458382,0.548783918618318,0.263069711437843,0.135804113845862,0,0.593175090620871,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.956441660344217,1.10295709559758,0.695603506861264|short_description=p9@Prkcq}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18761 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt=Q02111,A6H667,B1AYX8,Q8CAV6 | |||
|association_with_transcript=-14bp_to_ENSMUST00000028118,NM_008859,uc008iia.1,uc008iib.1,uc008iic.1_5end | |||
|cluster_id=chr2:11093983..11093994,+ | |||
|description=CAGE_peak_9_at_Prkcq_5end | |||
|id=chr2:11093983..11093994,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.42e-08!9;CL:0000789!8.42e-08!9;CL:0002420!8.42e-08!9;CL:0002419!8.42e-08!9;CL:0000790!8.42e-08!9;CL:0000624!5.56e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.02e-14,9;CL:0000789,6.02e-14,9;CL:0002420,6.02e-14,9;CL:0002419,6.02e-14,9;CL:0000790,6.02e-14,9;CL:0000624,1.45e-11,8;CL:0000084,3.33e-11,11;CL:0000827,3.33e-11,11;CL:0000838,3.55e-10,12;CL:0000542,2.63e-09,13;CL:0000051,2.63e-09,13;CL:0000893,4.31e-07,6;CL:0002489,4.31e-07,6;CL:0000898,4.31e-07,6;CL:0000809,4.31e-07,6;CL:0000810,4.31e-07,6;CL:0000895,4.31e-07,6;CL:0000808,4.31e-07,6;CL:0000894,4.31e-07,6;CL:0000806,4.31e-07,6;CL:0000807,4.31e-07,6;CL:0000805,4.31e-07,6;CL:0002425,4.31e-07,6;CL:0002436,4.31e-07,6;CL:0002427,4.31e-07,6;CL:0002428,4.31e-07,6;CL:0002429,4.31e-07,6;CL:0002433,4.31e-07,6;CL:0002431,4.31e-07,6;CL:0002432,4.31e-07,6;CL:0000738,7.45e-07,17;CL:0002087,7.45e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.36e-11!24;UBERON:0001557!1.36e-11!24;UBERON:0001042!1.36e-11!24;UBERON:0008814!1.36e-11!24;UBERON:0009145!1.36e-11!24;UBERON:0002370!7.66e-11!23;UBERON:0000974!7.66e-11!23;UBERON:0004807!7.66e-11!23;UBERON:0005058!7.66e-11!23;UBERON:0003351!7.66e-11!23;UBERON:0009113!7.66e-11!23;UBERON:0003295!7.66e-11!23;UBERON:0009722!7.66e-11!23;UBERON:0005562!7.66e-11!23;UBERON:0007690!7.66e-11!23;UBERON:0003408!5.45e-10!24;UBERON:0000072!3.44e-09!27;UBERON:0004177!8.60e-09!29;UBERON:0000065!9.28e-08!41;UBERON:0000063!1.80e-07!35;UBERON:0001004!2.61e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,1.00e-23,24;UBERON:0001557,1.00e-23,24;UBERON:0001042,1.00e-23,24;UBERON:0008814,1.00e-23,24;UBERON:0009145,1.00e-23,24;UBERON:0002370,1.43e-21,23;UBERON:0000974,1.43e-21,23;UBERON:0004807,1.43e-21,23;UBERON:0005058,1.43e-21,23;UBERON:0003351,1.43e-21,23;UBERON:0009113,1.43e-21,23;UBERON:0003295,1.43e-21,23;UBERON:0009722,1.43e-21,23;UBERON:0005562,1.43e-21,23;UBERON:0007690,1.43e-21,23;UBERON:0000072,1.14e-20,27;UBERON:0003408,1.59e-20,24;UBERON:0007811,1.45e-16,36;UBERON:0004177,2.20e-16,29;UBERON:0005057,2.20e-16,29;UBERON:0000065,8.20e-16,41;UBERON:0001004,2.46e-15,42;UBERON:0000077,7.87e-15,35;UBERON:0000153,3.19e-13,43;UBERON:0002193,1.92e-11,48;UBERON:0002405,1.92e-11,48;UBERON:0002390,9.23e-11,45;UBERON:0003061,9.23e-11,45;UBERON:0003929,3.99e-08,55;UBERON:0005911,1.33e-07,69;UBERON:0002368,3.69e-07,60;UBERON:0003081,4.57e-07,87;UBERON:0001041,5.57e-07,80 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,7.48915275961142,0.84473233291,1.17032263160997,1.36974374580404,0.797721589953364,11.1280474455284,7.34331380319578,0,0.404950534779652,0.699561878128147,1.26184866143295,0.822686601634433,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,3.62681071005672,9.07453257684653,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.638436690425939,1.0752457327937,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,0.45839474333043,1.17851434189467,0.284743361598206,0.372798891650601,0.151452386666368,0.68014404096107,1.15945795480671,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,4.66088190564909,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0,0.144599356919912,2.65383165584962,0.808834249737046,1.54589062922275,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0,0.149790639404823,0.457500602818626,0,0.521472960576829,0,0.62336413367868,1.46017136760982,0,0.622034853050465,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.187403449119458,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.292399974850665,0,0.536825675041487,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0.775809948670503,0.0701358198903186,0.69560190836683,0.442830443938806,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0,0.630540576424764,0,0.637819074629948,1.14704320301017,1.20879487306127,0.433947175744535,0,0,0,0,0.80275294993896,1.64096361229084,0,3.02965112645248,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0,0.23467170806371,0,0,0.98931751764888,0.484393280087717,0.120625849856312,0.119372344003136,0.164140899745061,0,1.66882771809459,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0.69975726161829,0.552799895217695,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,3.16011120628178,0.202725215290164,0.924398614483445,0.77952493786677,1.25318686967237,2.58285761215644,1.9231271923195,1.32920574457119,1.00966449948148,1.37172251979,1.71404514732629,1.75424185331554,2.5977197242889,2.33753804363138,3.40095575422817,0,0,0,0.965947970160952,0,0.183151624267265,0,0,0,0,0,0.515559547031063,1.37016503954128,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,1.11123363900808,0.412070114477788,0,0,0,0.565879024158229,0,0.320125762024346,0.402048282689293,0,0.579421629724277,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.436039249896986,0.188218760830661,0.423073039458382,0.548783918618318,0.263069711437843,0.135804113845862,0,0.593175090620871,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.956441660344217,1.10295709559758,0.695603506861264 | |||
|short_description=p9@Prkcq | |||
}} |
Latest revision as of 23:03, 1 October 2015
Short description: | p9@Prkcq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Prkcq_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | -14bp_to_ENSMUST00000028118, NM_008859, uc008iia.1, uc008iib.1, uc008iic.1_5end |
EntrezGene: | Prkcq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pharynx | 1.00e-23 | 24 |
upper respiratory tract | 1.00e-23 | 24 |
chordate pharynx | 1.00e-23 | 24 |
pharyngeal arch system | 1.00e-23 | 24 |
pharyngeal region of foregut | 1.00e-23 | 24 |
thymus | 1.43e-21 | 23 |
neck | 1.43e-21 | 23 |
respiratory system epithelium | 1.43e-21 | 23 |
hemolymphoid system gland | 1.43e-21 | 23 |
pharyngeal epithelium | 1.43e-21 | 23 |
thymic region | 1.43e-21 | 23 |
pharyngeal gland | 1.43e-21 | 23 |
entire pharyngeal arch endoderm | 1.43e-21 | 23 |
thymus primordium | 1.43e-21 | 23 |
early pharyngeal endoderm | 1.43e-21 | 23 |
segment of respiratory tract | 1.14e-20 | 27 |
gland of gut | 1.59e-20 | 24 |
craniocervical region | 1.45e-16 | 36 |
hemopoietic organ | 2.20e-16 | 29 |
immune organ | 2.20e-16 | 29 |
respiratory tract | 8.20e-16 | 41 |
respiratory system | 2.46e-15 | 42 |
mixed endoderm/mesoderm-derived structure | 7.87e-15 | 35 |
anterior region of body | 3.19e-13 | 43 |
hemolymphoid system | 1.92e-11 | 48 |
immune system | 1.92e-11 | 48 |
hematopoietic system | 9.23e-11 | 45 |
blood island | 9.23e-11 | 45 |
gut epithelium | 3.99e-08 | 55 |
endo-epithelium | 1.33e-07 | 69 |
endocrine gland | 3.69e-07 | 60 |
lateral plate mesoderm | 4.57e-07 | 87 |
foregut | 5.57e-07 | 80 |