FFCP PHASE1:Mm9::chrX:48194566..48194598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70415 | |EntrezGene=70415 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=806 | |||
|TSSclassifier=NA | |||
|UniProt=A2AD85,Q99JT2 | |UniProt=A2AD85,Q99JT2 | ||
|association_with_transcript=-14bp_to_NM_133729,uc009tdr.1_5end | |association_with_transcript=-14bp_to_NM_133729,uc009tdr.1_5end | ||
|cluster_id=chrX:48194566..48194598,+ | |||
|description=CAGE_peak_1_at_2610018G03Rik_5end | |description=CAGE_peak_1_at_2610018G03Rik_5end | ||
|id=chrX:48194566..48194598,+ | |id=chrX:48194566..48194598,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.83e-08!13;CL:0000051!5.83e-08!13;CL:0000838!6.26e-08!12;CL:0000084!1.35e-07!11;CL:0000827!1.35e-07!11;CL:0000791!9.49e-07!9;CL:0000789!9.49e-07!9;CL:0002420!9.49e-07!9;CL:0002419!9.49e-07!9;CL:0000790!9.49e-07!9 | |ontology_enrichment_celltype=CL:0000542!5.83e-08!13;CL:0000051!5.83e-08!13;CL:0000838!6.26e-08!12;CL:0000084!1.35e-07!11;CL:0000827!1.35e-07!11;CL:0000791!9.49e-07!9;CL:0000789!9.49e-07!9;CL:0002420!9.49e-07!9;CL:0002419!9.49e-07!9;CL:0000790!9.49e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.62e-08,13;CL:0000051,4.62e-08,13;CL:0000838,4.96e-08,12;CL:0000084,1.08e-07,11;CL:0000827,1.08e-07,11;CL:0000988,5.72e-07,32;CL:0002032,5.72e-07,32;CL:0000037,5.72e-07,32;CL:0000837,5.72e-07,32;CL:0000791,7.85e-07,9;CL:0000789,7.85e-07,9;CL:0002420,7.85e-07,9;CL:0002419,7.85e-07,9;CL:0000790,7.85e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.58e-09!29;UBERON:0000926!8.20e-09!193;UBERON:0004120!8.20e-09!193;UBERON:0006603!8.20e-09!193;UBERON:0000072!1.55e-08!27;UBERON:0003081!3.08e-08!88;UBERON:0002370!5.24e-08!23;UBERON:0000974!5.24e-08!23;UBERON:0004807!5.24e-08!23;UBERON:0005058!5.24e-08!23;UBERON:0003351!5.24e-08!23;UBERON:0009113!5.24e-08!23;UBERON:0003295!5.24e-08!23;UBERON:0009722!5.24e-08!23;UBERON:0005562!5.24e-08!23;UBERON:0007690!5.24e-08!23;UBERON:0003408!6.84e-08!24;UBERON:0006562!8.13e-08!24;UBERON:0001557!8.13e-08!24;UBERON:0001042!8.13e-08!24;UBERON:0008814!8.13e-08!24;UBERON:0009145!8.13e-08!24;UBERON:0001048!9.55e-08!147;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0002193!1.98e-07!48;UBERON:0000065!4.08e-07!41;UBERON:0001004!4.26e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.19e-10,29;UBERON:0005057,5.19e-10,29;UBERON:0000072,5.42e-09,27;UBERON:0000153,6.56e-09,43;UBERON:0003081,1.14e-08,87;UBERON:0000926,1.38e-08,120;UBERON:0004120,1.38e-08,120;UBERON:0006603,1.38e-08,120;UBERON:0002370,1.81e-08,23;UBERON:0000974,1.81e-08,23;UBERON:0004807,1.81e-08,23;UBERON:0005058,1.81e-08,23;UBERON:0003351,1.81e-08,23;UBERON:0009113,1.81e-08,23;UBERON:0003295,1.81e-08,23;UBERON:0009722,1.81e-08,23;UBERON:0005562,1.81e-08,23;UBERON:0007690,1.81e-08,23;UBERON:0003408,2.43e-08,24;UBERON:0002390,2.59e-08,45;UBERON:0003061,2.59e-08,45;UBERON:0002193,2.83e-08,48;UBERON:0002405,2.83e-08,48;UBERON:0006562,2.91e-08,24;UBERON:0001557,2.91e-08,24;UBERON:0001042,2.91e-08,24;UBERON:0008814,2.91e-08,24;UBERON:0009145,2.91e-08,24;UBERON:0000077,1.14e-07,35;UBERON:0000065,1.84e-07,41;UBERON:0001004,1.94e-07,42;UBERON:0001048,1.96e-07,134;UBERON:0001041,6.25e-07,80 | |||
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| ||
|short_description=p1@2610018G03Rik | |short_description=p1@2610018G03Rik | ||
}} | }} |
Latest revision as of 21:21, 1 October 2015
Short description: | p1@2610018G03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2610018G03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:806 |
Association with transcript: | -14bp_to_NM_133729, uc009tdr.1_5end |
EntrezGene: | 2610018G03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.62e-08 | 13 |
common lymphoid progenitor | 4.62e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.96e-08 | 12 |
T cell | 1.08e-07 | 11 |
pro-T cell | 1.08e-07 | 11 |
hematopoietic cell | 5.72e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.72e-07 | 32 |
hematopoietic stem cell | 5.72e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.72e-07 | 32 |
mature alpha-beta T cell | 7.85e-07 | 9 |
alpha-beta T cell | 7.85e-07 | 9 |
immature T cell | 7.85e-07 | 9 |
mature T cell | 7.85e-07 | 9 |
immature alpha-beta T cell | 7.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.19e-10 | 29 |
immune organ | 5.19e-10 | 29 |
segment of respiratory tract | 5.42e-09 | 27 |
anterior region of body | 6.56e-09 | 43 |
lateral plate mesoderm | 1.14e-08 | 87 |
mesoderm | 1.38e-08 | 120 |
mesoderm-derived structure | 1.38e-08 | 120 |
presumptive mesoderm | 1.38e-08 | 120 |
thymus | 1.81e-08 | 23 |
neck | 1.81e-08 | 23 |
respiratory system epithelium | 1.81e-08 | 23 |
hemolymphoid system gland | 1.81e-08 | 23 |
pharyngeal epithelium | 1.81e-08 | 23 |
thymic region | 1.81e-08 | 23 |
pharyngeal gland | 1.81e-08 | 23 |
entire pharyngeal arch endoderm | 1.81e-08 | 23 |
thymus primordium | 1.81e-08 | 23 |
early pharyngeal endoderm | 1.81e-08 | 23 |
gland of gut | 2.43e-08 | 24 |
hematopoietic system | 2.59e-08 | 45 |
blood island | 2.59e-08 | 45 |
hemolymphoid system | 2.83e-08 | 48 |
immune system | 2.83e-08 | 48 |
pharynx | 2.91e-08 | 24 |
upper respiratory tract | 2.91e-08 | 24 |
chordate pharynx | 2.91e-08 | 24 |
pharyngeal arch system | 2.91e-08 | 24 |
pharyngeal region of foregut | 2.91e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 1.14e-07 | 35 |
respiratory tract | 1.84e-07 | 41 |
respiratory system | 1.94e-07 | 42 |
primordium | 1.96e-07 | 134 |
foregut | 6.25e-07 | 80 |