Personal tools

FFCP PHASE1:Mm9::chr11:61267494..61267521,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr11:61267494..61267521,- |short_description=p2@Rnf112 |description=CAGE_peak_2_at_Rnf112_5end |association_with_transcript=0bp_to_ENSMUST00000054927,ENSMUST00...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:61267494..61267521,-
|DHSsupport=NA
|short_description=p2@Rnf112
|DPIdataset=NA
|description=CAGE_peak_2_at_Rnf112_5end
|association_with_transcript=0bp_to_ENSMUST00000054927,ENSMUST00000060255_5end
|EntrezGene=22671
|EntrezGene=22671
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q96DY5,Q8JZT5
|UniProt=Q96DY5,Q8JZT5
|association_with_transcript=0bp_to_ENSMUST00000054927,ENSMUST00000060255_5end
|cluster_id=chr11:61267494..61267521,-
|description=CAGE_peak_2_at_Rnf112_5end
|id=chr11:61267494..61267521,-
|ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000117!9.42e-14!23;CL:0000337!9.42e-14!23;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0000221!4.09e-10!44;CL:0000133!4.09e-10!44;CL:0002319!5.56e-10!43;CL:0000055!3.84e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-14,23;CL:0000337,1.19e-14,23;CL:0000540,3.79e-09,33;CL:0000047,3.79e-09,33;CL:0000031,3.79e-09,33;CL:0000404,3.79e-09,33;CL:0000393,3.16e-07,39;CL:0000211,3.16e-07,39;CL:0002610,6.47e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.98e-35!73;UBERON:0005743!3.98e-35!73;UBERON:0000073!2.33e-34!75;UBERON:0001016!2.33e-34!75;UBERON:0001049!1.01e-33!52;UBERON:0005068!1.01e-33!52;UBERON:0006241!1.01e-33!52;UBERON:0007135!1.01e-33!52;UBERON:0000955!1.43e-32!50;UBERON:0006238!1.43e-32!50;UBERON:0002616!8.23e-32!49;UBERON:0000033!7.11e-28!63;UBERON:0004121!7.46e-28!102;UBERON:0000924!7.46e-28!102;UBERON:0006601!7.46e-28!102;UBERON:0003080!8.04e-28!40;UBERON:0002346!2.85e-27!71;UBERON:0003075!2.85e-27!71;UBERON:0007284!2.85e-27!71;UBERON:0002780!5.19e-27!39;UBERON:0001890!5.19e-27!39;UBERON:0006240!5.19e-27!39;UBERON:0002020!1.36e-23!34;UBERON:0003056!3.51e-23!49;UBERON:0002791!5.43e-20!29;UBERON:0003528!5.43e-20!29;UBERON:0001893!5.43e-20!29;UBERON:0000153!1.81e-15!94;UBERON:0007811!1.14e-14!86;UBERON:0000956!2.64e-14!21;UBERON:0001869!2.64e-14!21;UBERON:0000203!2.64e-14!21;UBERON:0002619!2.55e-12!17;UBERON:0002021!1.75e-10!10;UBERON:0000411!1.75e-10!10;UBERON:0001950!1.75e-10!10;UBERON:0000025!1.23e-08!114;UBERON:0004111!4.72e-08!122;UBERON:0001894!8.43e-08!10;UBERON:0006222!8.43e-08!10;UBERON:0002420!7.14e-07!8;UBERON:0007245!7.14e-07!8;UBERON:0010009!7.14e-07!8;UBERON:0010011!7.14e-07!8;UBERON:0000454!7.14e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-59,54;UBERON:0001049,3.30e-55,52;UBERON:0005068,3.30e-55,52;UBERON:0006241,3.30e-55,52;UBERON:0007135,3.30e-55,52;UBERON:0000955,5.90e-47,47;UBERON:0006238,5.90e-47,47;UBERON:0001017,5.89e-46,73;UBERON:0002616,2.17e-45,46;UBERON:0001016,1.80e-44,75;UBERON:0002346,4.34e-43,64;UBERON:0003075,4.34e-43,64;UBERON:0007284,4.34e-43,64;UBERON:0003080,1.06e-40,40;UBERON:0002780,5.01e-39,39;UBERON:0001890,5.01e-39,39;UBERON:0006240,5.01e-39,39;UBERON:0002020,1.13e-36,34;UBERON:0010371,1.30e-36,73;UBERON:0004121,4.72e-33,95;UBERON:0000924,4.72e-33,95;UBERON:0006601,4.72e-33,95;UBERON:0003056,9.42e-32,49;UBERON:0003528,4.69e-29,29;UBERON:0002791,4.69e-29,29;UBERON:0001893,4.69e-29,29;UBERON:0010314,4.34e-27,92;UBERON:0002021,2.39e-21,10;UBERON:0000411,2.39e-21,10;UBERON:0001950,2.39e-21,10;UBERON:0000025,2.92e-21,114;UBERON:0004111,3.11e-19,122;UBERON:0002619,3.90e-19,17;UBERON:0000956,2.48e-17,21;UBERON:0001869,2.48e-17,21;UBERON:0000203,2.48e-17,21;UBERON:0003076,1.08e-13,12;UBERON:0003057,1.08e-13,12;UBERON:0002420,2.37e-13,8;UBERON:0007245,2.37e-13,8;UBERON:0010009,2.37e-13,8;UBERON:0010011,2.37e-13,8;UBERON:0000454,2.37e-13,8;UBERON:0011216,6.51e-12,194;UBERON:0000483,1.37e-10,174;UBERON:0001894,2.31e-10,10;UBERON:0006222,2.31e-10,10;UBERON:0000119,2.33e-10,176;UBERON:0002240,3.39e-10,6;UBERON:0005174,3.39e-10,6;UBERON:0001137,3.39e-10,6;UBERON:0001948,9.00e-09,5;UBERON:0002315,9.00e-09,5;UBERON:0000369,1.93e-08,5;UBERON:0002435,1.93e-08,5;UBERON:0000204,1.93e-08,5;UBERON:0010082,1.93e-08,5;UBERON:0002950,4.45e-08,4;UBERON:0001891,4.45e-08,4;UBERON:0009616,4.45e-08,4;UBERON:0010286,4.45e-08,4;UBERON:0000007,3.00e-07,8;UBERON:0003296,3.00e-07,8;UBERON:0010133,3.00e-07,8;UBERON:0004684,6.47e-07,3;UBERON:0002275,6.47e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0.210324961351382,3.42781181284564,3.09215957332259,0.734944795289724,0.575072826109418,1.83843757322004,13.2139057199266,9.3211756802187,14.5926206593431,1.71452174049252,2.65314166446988,1.04182674111352,5.02529398202486,7.87867654044352,6.57032465440283,3.24091444021034,2.13557521198654,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,16.1029438356351,18.850203613211,0,0,0,0,3.74476598512057,6.8625090422794,1.13088916901578,11.1247564923057,11.5071955798649,10.1816141834184,8.27430441645564,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.703804496655795,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,21.0289948564127,2.88132914661996,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,2.93029216480508,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.540183282093931,1.03486947026204,0.857348140126369,5.32020700926821,4.45922044005176,1.97458824722545,2.13125464380219,0,0,0,0,0,0.120625849856312,0.477489376012546,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,19.7663144915973,20.714635642823,20.6242384838183,23.3720327987415,25.3480532315138,34.7481192799262,29.0259675099676,20.2644541450899,15.406841905463,24.8524949640874,0,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.512201219238954,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0.210324961351382,3.42781181284564,3.09215957332259,0.734944795289724,0.575072826109418,1.83843757322004,13.2139057199266,9.3211756802187,14.5926206593431,1.71452174049252,2.65314166446988,1.04182674111352,5.02529398202486,7.87867654044352,6.57032465440283,3.24091444021034,2.13557521198654,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,16.1029438356351,18.850203613211,0,0,0,0,3.74476598512057,6.8625090422794,1.13088916901578,11.1247564923057,11.5071955798649,10.1816141834184,8.27430441645564,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.703804496655795,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,21.0289948564127,2.88132914661996,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,2.93029216480508,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.540183282093931,1.03486947026204,0.857348140126369,5.32020700926821,4.45922044005176,1.97458824722545,2.13125464380219,0,0,0,0,0,0.120625849856312,0.477489376012546,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,19.7663144915973,20.714635642823,20.6242384838183,23.3720327987415,25.3480532315138,34.7481192799262,29.0259675099676,20.2644541450899,15.406841905463,24.8524949640874,0,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.512201219238954,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p2@Rnf112
}}
}}

Latest revision as of 20:30, 1 October 2015

Short description:p2@Rnf112
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnf112_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000054927, ENSMUST00000060255_5end
EntrezGene:Rnf112
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rnf112

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I218.85
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D511.12
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E821.03
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A425.35
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A534.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.80e-5954
neural tube3.30e-5552
neural rod3.30e-5552
future spinal cord3.30e-5552
neural keel3.30e-5552
brain5.90e-4747
future brain5.90e-4747
central nervous system5.89e-4673
regional part of brain2.17e-4546
nervous system1.80e-4475
neurectoderm4.34e-4364
neural plate4.34e-4364
presumptive neural plate4.34e-4364
anterior neural tube1.06e-4040
regional part of forebrain5.01e-3939
forebrain5.01e-3939
future forebrain5.01e-3939
gray matter1.13e-3634
ecto-epithelium1.30e-3673
ectoderm-derived structure4.72e-3395
ectoderm4.72e-3395
presumptive ectoderm4.72e-3395
pre-chordal neural plate9.42e-3249
brain grey matter4.69e-2929
regional part of telencephalon4.69e-2929
telencephalon4.69e-2929
structure with developmental contribution from neural crest4.34e-2792
occipital lobe2.39e-2110
visual cortex2.39e-2110
neocortex2.39e-2110
tube2.92e-21114
anatomical conduit3.11e-19122
regional part of cerebral cortex3.90e-1917
cerebral cortex2.48e-1721
cerebral hemisphere2.48e-1721
pallium2.48e-1721
posterior neural tube1.08e-1312
chordal neural plate1.08e-1312
basal ganglion2.37e-138
nuclear complex of neuraxis2.37e-138
aggregate regional part of brain2.37e-138
collection of basal ganglia2.37e-138
cerebral subcortex2.37e-138
organ system subdivision6.51e-12194
epithelium1.37e-10174
diencephalon2.31e-1010
future diencephalon2.31e-1010
cell layer2.33e-10176
spinal cord3.39e-106
dorsal region element3.39e-106
dorsum3.39e-106
regional part of spinal cord9.00e-095
gray matter of spinal cord9.00e-095
corpus striatum1.93e-085
striatum1.93e-085
ventral part of telencephalon1.93e-085
future corpus striatum1.93e-085
regional part of midbrain4.45e-084
midbrain4.45e-084
presumptive midbrain4.45e-084
midbrain neural tube4.45e-084
pituitary gland3.00e-078
gland of diencephalon3.00e-078
neuroendocrine gland3.00e-078
raphe nuclei6.47e-073
reticular formation6.47e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:61267494..61267521,-&oldid=4320903"