FFCP PHASE1:Mm9::chr6:85911625..85911665,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:85911625..85911665,-
|short_description=p1@Dusp11
|description=CAGE_peak_1_at_Dusp11_5end
|association_with_transcript=0bp_to_ENSMUST00000032071,ENSMUST000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72102 | |EntrezGene=72102 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=317 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NXK5 | |UniProt=Q6NXK5 | ||
|association_with_transcript=0bp_to_ENSMUST00000032071,ENSMUST00000151394,NM_028099,uc009cqp.1_5end | |||
|cluster_id=chr6:85911625..85911665,- | |||
|description=CAGE_peak_1_at_Dusp11_5end | |||
|id=chr6:85911625..85911665,- | |||
|ontology_enrichment_celltype=CL:0000791!7.23e-07!9;CL:0000789!7.23e-07!9;CL:0002420!7.23e-07!9;CL:0002419!7.23e-07!9;CL:0000790!7.23e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.23e-07,9;CL:0000789,7.23e-07,9;CL:0002420,7.23e-07,9;CL:0002419,7.23e-07,9;CL:0000790,7.23e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.47e-09!42;UBERON:0004119!3.22e-09!130;UBERON:0000925!3.22e-09!130;UBERON:0006595!3.22e-09!130;UBERON:0000065!3.88e-09!41;UBERON:0001007!6.59e-09!128;UBERON:0001555!6.59e-09!128;UBERON:0007026!6.59e-09!128;UBERON:0000072!7.53e-09!27;UBERON:0004921!1.35e-08!126;UBERON:0004185!1.35e-08!126;UBERON:0004177!1.63e-08!29;UBERON:0003408!2.30e-08!24;UBERON:0006562!2.45e-08!24;UBERON:0001557!2.45e-08!24;UBERON:0001042!2.45e-08!24;UBERON:0008814!2.45e-08!24;UBERON:0009145!2.45e-08!24;UBERON:0002370!6.34e-08!23;UBERON:0000974!6.34e-08!23;UBERON:0004807!6.34e-08!23;UBERON:0005058!6.34e-08!23;UBERON:0003351!6.34e-08!23;UBERON:0009113!6.34e-08!23;UBERON:0003295!6.34e-08!23;UBERON:0009722!6.34e-08!23;UBERON:0005562!6.34e-08!23;UBERON:0007690!6.34e-08!23;UBERON:0000063!2.48e-07!35;UBERON:0002193!2.73e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.27e-10,118;UBERON:0000925,1.27e-10,118;UBERON:0006595,1.27e-10,118;UBERON:0001007,2.69e-10,116;UBERON:0001555,2.69e-10,116;UBERON:0007026,2.69e-10,116;UBERON:0000077,3.48e-10,35;UBERON:0004921,5.71e-10,114;UBERON:0001004,1.47e-09,42;UBERON:0000065,3.88e-09,41;UBERON:0000072,7.53e-09,27;UBERON:0004177,1.63e-08,29;UBERON:0005057,1.63e-08,29;UBERON:0003408,2.30e-08,24;UBERON:0006562,2.45e-08,24;UBERON:0001557,2.45e-08,24;UBERON:0001042,2.45e-08,24;UBERON:0008814,2.45e-08,24;UBERON:0009145,2.45e-08,24;UBERON:0002370,6.34e-08,23;UBERON:0000974,6.34e-08,23;UBERON:0004807,6.34e-08,23;UBERON:0005058,6.34e-08,23;UBERON:0003351,6.34e-08,23;UBERON:0009113,6.34e-08,23;UBERON:0003295,6.34e-08,23;UBERON:0009722,6.34e-08,23;UBERON:0005562,6.34e-08,23;UBERON:0007690,6.34e-08,23;UBERON:0002193,2.73e-07,48;UBERON:0002405,2.73e-07,48;UBERON:0001041,8.91e-07,80 | |||
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| ||
|short_description=p1@Dusp11 | |||
}} | }} |
Latest revision as of 20:06, 1 October 2015
Short description: | p1@Dusp11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dusp11_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | 0bp_to_ENSMUST00000032071, ENSMUST00000151394, NM_028099, uc009cqp.1_5end |
EntrezGene: | Dusp11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.23e-07 | 9 |
alpha-beta T cell | 7.23e-07 | 9 |
immature T cell | 7.23e-07 | 9 |
mature T cell | 7.23e-07 | 9 |
immature alpha-beta T cell | 7.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.27e-10 | 118 |
endoderm | 1.27e-10 | 118 |
presumptive endoderm | 1.27e-10 | 118 |
digestive system | 2.69e-10 | 116 |
digestive tract | 2.69e-10 | 116 |
primitive gut | 2.69e-10 | 116 |
mixed endoderm/mesoderm-derived structure | 3.48e-10 | 35 |
subdivision of digestive tract | 5.71e-10 | 114 |
respiratory system | 1.47e-09 | 42 |
respiratory tract | 3.88e-09 | 41 |
segment of respiratory tract | 7.53e-09 | 27 |
hemopoietic organ | 1.63e-08 | 29 |
immune organ | 1.63e-08 | 29 |
gland of gut | 2.30e-08 | 24 |
pharynx | 2.45e-08 | 24 |
upper respiratory tract | 2.45e-08 | 24 |
chordate pharynx | 2.45e-08 | 24 |
pharyngeal arch system | 2.45e-08 | 24 |
pharyngeal region of foregut | 2.45e-08 | 24 |
thymus | 6.34e-08 | 23 |
neck | 6.34e-08 | 23 |
respiratory system epithelium | 6.34e-08 | 23 |
hemolymphoid system gland | 6.34e-08 | 23 |
pharyngeal epithelium | 6.34e-08 | 23 |
thymic region | 6.34e-08 | 23 |
pharyngeal gland | 6.34e-08 | 23 |
entire pharyngeal arch endoderm | 6.34e-08 | 23 |
thymus primordium | 6.34e-08 | 23 |
early pharyngeal endoderm | 6.34e-08 | 23 |
hemolymphoid system | 2.73e-07 | 48 |
immune system | 2.73e-07 | 48 |
foregut | 8.91e-07 | 80 |