FFCP PHASE1:Mm9::chr3:142159736..142159753,+: Difference between revisions
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{{FFCP|EntrezGene=229898|HGNC=|MCL_coexpression_id=553|UniProt=Q8BU78|association_with_transcript=-110bp_to_ENSMUST00000045254_5end|description=CAGE_peak_2_at_Gbp5_5end|id=chr3:142159736..142159753,+|ontology_enrichment_celltype=CL:0000988!1.59e-08!32;CL:0002032!1.59e-08!32;CL:0000037!1.59e-08!32;CL:0000566!1.59e-08!32;CL:0000837!1.59e-08!32;CL:0000838!3.48e-08!12;CL:0002031!1.77e-07!25;CL:0000084!2.40e-07!11;CL:0000827!2.40e-07!11;CL:0000542!3.12e-07!13;CL:0000051!3.12e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,1.05e-15,25;CL:0000988,1.27e-11,32;CL:0002032,1.27e-11,32;CL:0000037,1.27e-11,32;CL:0000837,1.27e-11,32;CL:0000553,1.98e-11,6;CL:0000556,1.98e-11,6;CL:0000791,1.40e-10,9;CL:0000789,1.40e-10,9;CL:0002420,1.40e-10,9;CL:0002419,1.40e-10,9;CL:0000790,1.40e-10,9;CL:0000838,1.88e-10,12;CL:0000542,1.46e-09,13;CL:0000051,1.46e-09,13;CL:0000738,6.24e-09,17;CL:0002087,6.24e-09,17;CL:0000084,1.62e-08,11;CL:0000827,1.62e-08,11;CL:0000624,1.69e-08,8;CL:0002320,1.94e-08,46;CL:0000134,1.94e-08,46;CL:0000050,1.77e-07,9;CL:0000839,7.99e-07,13;CL:0000219,9.72e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.67e-13!48;UBERON:0002390!1.30e-12!45;UBERON:0003061!1.30e-12!45;UBERON:0004177!1.83e-11!29;UBERON:0003408!1.48e-10!24;UBERON:0006562!4.20e-10!24;UBERON:0001557!4.20e-10!24;UBERON:0001042!4.20e-10!24;UBERON:0008814!4.20e-10!24;UBERON:0009145!4.20e-10!24;UBERON:0002370!6.73e-10!23;UBERON:0000974!6.73e-10!23;UBERON:0004807!6.73e-10!23;UBERON:0005058!6.73e-10!23;UBERON:0003351!6.73e-10!23;UBERON:0009113!6.73e-10!23;UBERON:0003295!6.73e-10!23;UBERON:0009722!6.73e-10!23;UBERON:0005562!6.73e-10!23;UBERON:0007690!6.73e-10!23;UBERON:0002405!3.56e-09!70;UBERON:0003081!1.57e-08!88;UBERON:0000072!3.76e-08!27;UBERON:0001004!5.41e-08!42;UBERON:0000065!1.81e-07!41;UBERON:0005057!7.70e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.23e-21,48;UBERON:0002405,5.23e-21,48;UBERON:0002390,2.58e-20,45;UBERON:0003061,2.58e-20,45;UBERON:0004177,4.01e-16,29;UBERON:0005057,4.01e-16,29;UBERON:0000077,1.08e-14,35;UBERON:0003408,4.09e-12,24;UBERON:0002370,1.08e-10,23;UBERON:0000974,1.08e-10,23;UBERON:0004807,1.08e-10,23;UBERON:0005058,1.08e-10,23;UBERON:0003351,1.08e-10,23;UBERON:0009113,1.08e-10,23;UBERON:0003295,1.08e-10,23;UBERON:0009722,1.08e-10,23;UBERON:0005562,1.08e-10,23;UBERON:0007690,1.08e-10,23;UBERON:0003081,2.70e-10,87;UBERON:0006562,3.71e-10,24;UBERON:0001557,3.71e-10,24;UBERON:0001042,3.71e-10,24;UBERON:0008814,3.71e-10,24;UBERON:0009145,3.71e-10,24;UBERON:0000072,8.60e-09,27;UBERON:0002384,1.94e-08,46;UBERON:0002106,2.70e-07,6;UBERON:0004457,2.70e-07,6;UBERON:0000042,2.70e-07,6;UBERON:0004854,2.70e-07,6;UBERON:0009034,2.70e-07,6;UBERON:0002095,2.70e-07,6;UBERON:0004782,2.70e-07,6;UBERON:0003281,2.70e-07,6;UBERON:0009664,2.70e-07,6;UBERON:0002296,2.70e-07,6;UBERON:0005602,2.70e-07,6;UBERON:0001179,2.70e-07,6;UBERON:0006293,2.70e-07,6;UBERON:0007811,2.77e-07,36;UBERON:0001004,4.38e-07,42|phase1_expression=0,0,0,0,0,0,0,15.8821687833139,0.563154888606667,2.57470978954193,0,0.398860794976682,4.28001824828014,6.11942816932982,1.99865857089398,1.82227740650843,0,13.249410945046,13.3001000597567,6.79023442876848,0.595303031057488,0.496454756004426,0.783599367416806,0.159992422793407,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,3.35565212115473,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0,1.44932244350839,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,11.6522047641227,0.29688427812965,0.173485326766136,0,0,0,0,0.251333182659351,0.247194967734374,1.44599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,0.838705871541442,0,0.762421362438388,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0.870848794270651,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.324275238183423,0.438599962275997,0.439100230582101,0.536825675041487,0.420579897128254,0,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0.358794827043824,0,1.66277871149944,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.655453258862952,0.345369963731791,0.723245292907558,0,1.08781136763742,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.556275906031529,3.2465467351592,0,0,2.0720530270516,2.59719032669948,2.97411625168479,2.71965487990169,3.35883485576779,2.9021994498929,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.608175645870493,0.513554785824136,1.29920822977795,1.07416017400489,0.39736270956253,0.721172697119813,1.47689527174577,1.00966449948148,0.762068066549998,1.20991422164209,0.974578807397524,1.53938946624527,1.63627663054197,0.226730383615211,0,0,0,0.386379188064381,0,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p2@Gbp5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229898 | |||
|HGNC= | |||
|MCL_coexpression_id=553 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BU78 | |||
|association_with_transcript=-110bp_to_ENSMUST00000045254_5end | |||
|cluster_id=chr3:142159736..142159753,+ | |||
|description=CAGE_peak_2_at_Gbp5_5end | |||
|id=chr3:142159736..142159753,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.59e-08!32;CL:0002032!1.59e-08!32;CL:0000037!1.59e-08!32;CL:0000566!1.59e-08!32;CL:0000837!1.59e-08!32;CL:0000838!3.48e-08!12;CL:0002031!1.77e-07!25;CL:0000084!2.40e-07!11;CL:0000827!2.40e-07!11;CL:0000542!3.12e-07!13;CL:0000051!3.12e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.05e-15,25;CL:0000988,1.27e-11,32;CL:0002032,1.27e-11,32;CL:0000037,1.27e-11,32;CL:0000837,1.27e-11,32;CL:0000553,1.98e-11,6;CL:0000556,1.98e-11,6;CL:0000791,1.40e-10,9;CL:0000789,1.40e-10,9;CL:0002420,1.40e-10,9;CL:0002419,1.40e-10,9;CL:0000790,1.40e-10,9;CL:0000838,1.88e-10,12;CL:0000542,1.46e-09,13;CL:0000051,1.46e-09,13;CL:0000738,6.24e-09,17;CL:0002087,6.24e-09,17;CL:0000084,1.62e-08,11;CL:0000827,1.62e-08,11;CL:0000624,1.69e-08,8;CL:0002320,1.94e-08,46;CL:0000134,1.94e-08,46;CL:0000050,1.77e-07,9;CL:0000839,7.99e-07,13;CL:0000219,9.72e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.67e-13!48;UBERON:0002390!1.30e-12!45;UBERON:0003061!1.30e-12!45;UBERON:0004177!1.83e-11!29;UBERON:0003408!1.48e-10!24;UBERON:0006562!4.20e-10!24;UBERON:0001557!4.20e-10!24;UBERON:0001042!4.20e-10!24;UBERON:0008814!4.20e-10!24;UBERON:0009145!4.20e-10!24;UBERON:0002370!6.73e-10!23;UBERON:0000974!6.73e-10!23;UBERON:0004807!6.73e-10!23;UBERON:0005058!6.73e-10!23;UBERON:0003351!6.73e-10!23;UBERON:0009113!6.73e-10!23;UBERON:0003295!6.73e-10!23;UBERON:0009722!6.73e-10!23;UBERON:0005562!6.73e-10!23;UBERON:0007690!6.73e-10!23;UBERON:0002405!3.56e-09!70;UBERON:0003081!1.57e-08!88;UBERON:0000072!3.76e-08!27;UBERON:0001004!5.41e-08!42;UBERON:0000065!1.81e-07!41;UBERON:0005057!7.70e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.23e-21,48;UBERON:0002405,5.23e-21,48;UBERON:0002390,2.58e-20,45;UBERON:0003061,2.58e-20,45;UBERON:0004177,4.01e-16,29;UBERON:0005057,4.01e-16,29;UBERON:0000077,1.08e-14,35;UBERON:0003408,4.09e-12,24;UBERON:0002370,1.08e-10,23;UBERON:0000974,1.08e-10,23;UBERON:0004807,1.08e-10,23;UBERON:0005058,1.08e-10,23;UBERON:0003351,1.08e-10,23;UBERON:0009113,1.08e-10,23;UBERON:0003295,1.08e-10,23;UBERON:0009722,1.08e-10,23;UBERON:0005562,1.08e-10,23;UBERON:0007690,1.08e-10,23;UBERON:0003081,2.70e-10,87;UBERON:0006562,3.71e-10,24;UBERON:0001557,3.71e-10,24;UBERON:0001042,3.71e-10,24;UBERON:0008814,3.71e-10,24;UBERON:0009145,3.71e-10,24;UBERON:0000072,8.60e-09,27;UBERON:0002384,1.94e-08,46;UBERON:0002106,2.70e-07,6;UBERON:0004457,2.70e-07,6;UBERON:0000042,2.70e-07,6;UBERON:0004854,2.70e-07,6;UBERON:0009034,2.70e-07,6;UBERON:0002095,2.70e-07,6;UBERON:0004782,2.70e-07,6;UBERON:0003281,2.70e-07,6;UBERON:0009664,2.70e-07,6;UBERON:0002296,2.70e-07,6;UBERON:0005602,2.70e-07,6;UBERON:0001179,2.70e-07,6;UBERON:0006293,2.70e-07,6;UBERON:0007811,2.77e-07,36;UBERON:0001004,4.38e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,15.8821687833139,0.563154888606667,2.57470978954193,0,0.398860794976682,4.28001824828014,6.11942816932982,1.99865857089398,1.82227740650843,0,13.249410945046,13.3001000597567,6.79023442876848,0.595303031057488,0.496454756004426,0.783599367416806,0.159992422793407,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,3.35565212115473,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0,1.44932244350839,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,11.6522047641227,0.29688427812965,0.173485326766136,0,0,0,0,0.251333182659351,0.247194967734374,1.44599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,0.838705871541442,0,0.762421362438388,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0.870848794270651,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.324275238183423,0.438599962275997,0.439100230582101,0.536825675041487,0.420579897128254,0,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0.358794827043824,0,1.66277871149944,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.655453258862952,0.345369963731791,0.723245292907558,0,1.08781136763742,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.556275906031529,3.2465467351592,0,0,2.0720530270516,2.59719032669948,2.97411625168479,2.71965487990169,3.35883485576779,2.9021994498929,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.608175645870493,0.513554785824136,1.29920822977795,1.07416017400489,0.39736270956253,0.721172697119813,1.47689527174577,1.00966449948148,0.762068066549998,1.20991422164209,0.974578807397524,1.53938946624527,1.63627663054197,0.226730383615211,0,0,0,0.386379188064381,0,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Gbp5 | |||
}} |
Latest revision as of 17:18, 1 October 2015
Short description: | p2@Gbp5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gbp5_5end |
Coexpression cluster: | MCL_coexpression_mm9:553 |
Association with transcript: | -110bp_to_ENSMUST00000045254_5end |
EntrezGene: | Gbp5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.05e-15 | 25 |
hematopoietic cell | 1.27e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.27e-11 | 32 |
hematopoietic stem cell | 1.27e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.27e-11 | 32 |
megakaryocyte progenitor cell | 1.98e-11 | 6 |
megakaryocyte | 1.98e-11 | 6 |
mature alpha-beta T cell | 1.40e-10 | 9 |
alpha-beta T cell | 1.40e-10 | 9 |
immature T cell | 1.40e-10 | 9 |
mature T cell | 1.40e-10 | 9 |
immature alpha-beta T cell | 1.40e-10 | 9 |
lymphoid lineage restricted progenitor cell | 1.88e-10 | 12 |
lymphocyte | 1.46e-09 | 13 |
common lymphoid progenitor | 1.46e-09 | 13 |
leukocyte | 6.24e-09 | 17 |
nongranular leukocyte | 6.24e-09 | 17 |
T cell | 1.62e-08 | 11 |
pro-T cell | 1.62e-08 | 11 |
CD4-positive, alpha-beta T cell | 1.69e-08 | 8 |
connective tissue cell | 1.94e-08 | 46 |
mesenchymal cell | 1.94e-08 | 46 |
megakaryocyte-erythroid progenitor cell | 1.77e-07 | 9 |
myeloid lineage restricted progenitor cell | 7.99e-07 | 13 |
motile cell | 9.72e-07 | 54 |