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FFCP PHASE1:Mm9::chr11:53520771..53520834,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19360
|EntrezGene=19360
|HGNC=
|HGNC=
|MCL_coexpression_id=364
|TSSclassifier=NA
|UniProt=Q5SV02,E9QPC6,P70388,A8Y5I3,E9PUJ2,Q3UNL2
|UniProt=Q5SV02,E9QPC6,P70388,A8Y5I3,E9PUJ2,Q3UNL2
|association_with_transcript=0bp_to_ENSMUST00000020649,ENSMUST00000102756,ENSMUST00000108933,ENSMUST00000124352,ENSMUST00000128483,NM_009012,uc007iwt.1,uc007iwu.1,uc011xur.1,uc011xus.1_5end
|association_with_transcript=0bp_to_ENSMUST00000020649,ENSMUST00000102756,ENSMUST00000108933,ENSMUST00000124352,ENSMUST00000128483,NM_009012,uc007iwt.1,uc007iwu.1,uc011xur.1,uc011xus.1_5end
|cluster_id=chr11:53520771..53520834,-
|description=CAGE_peak_1_at_Rad50_5end
|description=CAGE_peak_1_at_Rad50_5end
|id=chr11:53520771..53520834,-
|id=chr11:53520771..53520834,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.44e-13!193;UBERON:0004120!1.44e-13!193;UBERON:0006603!1.44e-13!193;UBERON:0004177!1.29e-11!29;UBERON:0002193!1.58e-10!48;UBERON:0002390!2.10e-10!45;UBERON:0003061!2.10e-10!45;UBERON:0000065!2.33e-09!41;UBERON:0001004!3.32e-09!42;UBERON:0001048!3.46e-09!147;UBERON:0003104!1.17e-08!131;UBERON:0009142!1.17e-08!131;UBERON:0002370!2.12e-08!23;UBERON:0000974!2.12e-08!23;UBERON:0004807!2.12e-08!23;UBERON:0005058!2.12e-08!23;UBERON:0003351!2.12e-08!23;UBERON:0009113!2.12e-08!23;UBERON:0003295!2.12e-08!23;UBERON:0009722!2.12e-08!23;UBERON:0005562!2.12e-08!23;UBERON:0007690!2.12e-08!23;UBERON:0003081!2.18e-08!88;UBERON:0003408!3.81e-08!24;UBERON:0004921!3.92e-08!126;UBERON:0004185!3.92e-08!126;UBERON:0001041!4.40e-08!92;UBERON:0002405!5.04e-08!70;UBERON:0006562!5.30e-08!24;UBERON:0001557!5.30e-08!24;UBERON:0001042!5.30e-08!24;UBERON:0008814!5.30e-08!24;UBERON:0009145!5.30e-08!24;UBERON:0001007!5.35e-08!128;UBERON:0001555!5.35e-08!128;UBERON:0007026!5.35e-08!128;UBERON:0000077!5.64e-08!97;UBERON:0000072!5.71e-08!27;UBERON:0004119!1.09e-07!130;UBERON:0000925!1.09e-07!130;UBERON:0006595!1.09e-07!130;UBERON:0005057!1.53e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.29e-11,29;UBERON:0005057,1.29e-11,29;UBERON:0000926,4.13e-11,120;UBERON:0004120,4.13e-11,120;UBERON:0006603,4.13e-11,120;UBERON:0002193,1.58e-10,48;UBERON:0002405,1.58e-10,48;UBERON:0002390,2.10e-10,45;UBERON:0003061,2.10e-10,45;UBERON:0000077,3.69e-10,35;UBERON:0001048,8.90e-10,134;UBERON:0001041,1.22e-09,80;UBERON:0000065,2.33e-09,41;UBERON:0004921,2.86e-09,114;UBERON:0001004,3.32e-09,42;UBERON:0001007,4.21e-09,116;UBERON:0001555,4.21e-09,116;UBERON:0007026,4.21e-09,116;UBERON:0004119,9.59e-09,118;UBERON:0000925,9.59e-09,118;UBERON:0006595,9.59e-09,118;UBERON:0002370,2.12e-08,23;UBERON:0000974,2.12e-08,23;UBERON:0004807,2.12e-08,23;UBERON:0005058,2.12e-08,23;UBERON:0003351,2.12e-08,23;UBERON:0009113,2.12e-08,23;UBERON:0003295,2.12e-08,23;UBERON:0009722,2.12e-08,23;UBERON:0005562,2.12e-08,23;UBERON:0007690,2.12e-08,23;UBERON:0003408,3.81e-08,24;UBERON:0006562,5.30e-08,24;UBERON:0001557,5.30e-08,24;UBERON:0001042,5.30e-08,24;UBERON:0008814,5.30e-08,24;UBERON:0009145,5.30e-08,24;UBERON:0000072,5.71e-08,27;UBERON:0003081,6.18e-08,87
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02598,17.1452402731864,19.8709933009022,10.2496903252464,13.9684340175818,12.5642852152334,14.6464919819726,12.4267862617385,5.6369293868419,22.5769984526408,19.6895603643946,18.4728628926845,17.307416346016,14.8681390431885,16.3126561717598,29.0355778202009,26.843992172982,14.0118790079084,9.79302021276743,21.1727450820879,18.4479945914049,22.6991215334268,27.1534520023592,26.4959509587873,24.8351693476581,27.043976141993,24.811840565329,29.4822033848591,28.5775524956249,27.2230699869469,25.1441332308561,27.6127985507746,25.0116570668558,11.3365191807606,13.763129109192,15.7896387632677,13.5986539254904,14.8755987404787,11.8239959534245,15.5678880627175,16.0776284309299,13.0408747049194,5.64751842617067,4.60325236507177,5.72895513439397,7.04598047609119,4.7955776383945,8.3093328712867,11.4753825039407,6.75481804836331,8.15656336171568,8.28416498802912,11.2090335390911,12.768795948833,12.9757540373142,15.3157231753025,12.157563432423,11.2144540154509,11.7790765734856,13.8043488350059,13.1576875932644,10.3605856823157,11.1530891951705,12.260712190095,14.8889996877113,12.8050304809739,12.6932386391905,10.9547548995107,12.6313915279892,14.4681915347779,13.1867488257058,12.5119082114238,13.3719008430312,10.4710725634009,12.3986818772607,10.0289027476307,11.0107975085937,13.7075664784516,10.7927503994936,11.3119975918272,11.4075455630524,11.2228454331548,11.8635018124174,13.0025916735744,10.2307760792422,11.6202630889474,14.2750892126045,8.24374907195222,10.9947855969342,10.3138105943183,11.2860115920618,10.3677966986172,8.81097775357602
|phase1_expression=9.28863313207805,10.8182376368202,7.27998783023258,7.25914107136392,6.01074875935617,12.9267039372155,8.87728034262997,18.7228818990286,13.51571732656,7.0219357896598,14.5535272991679,13.3219505522212,19.3456824822262,14.7740480088106,24.650122374359,19.2351504020335,32.1798463938947,23.9751245672261,24.9548269162445,22.9170411970936,9.52484849691981,22.4397549714001,17.5003858723087,11.6794468639187,11.9292826154928,7.46501553349526,8.61523992318149,11.2045040996662,9.12112413390595,16.6339885641554,7.76056787293567,13.9706748161119,14.7615549020297,0,16.1756907060714,19.7819227976606,16.1293791447272,7.11503772252743,8.5946887897618,13.088093599345,6.47054636834116,9.56263678941824,10.1957174136542,16.1147927008739,13.3817549209759,13.9495531642878,4.69434806608824,2.8343270329458,1.5378032791413,1.74986909166855,3.21968769738334,0,15.1004345451963,7.25362142011344,13.1076581665561,9.00408026125814,11.747871037489,11.3447860301037,3.43937983461316,5.28990979272033,0.633831403506179,4.74382344896785,2.66788438833342,6.74924787961049,3.9554654502679,3.5524005747305,3.29560121570245,2.68952813725088,7.46565208621039,5.8052553482627,4.6271491497304,2.85650984403804,2.20868540951614,5.63457676388789,4.2172007248024,6.43453150627015,6.60695285996332,5.87361755191863,6.45147439676223,3.29715719325485,2.37867873366265,3.12548022334056,2.79182999001381,2.8138130501584,5.65353516774197,5.89257170947335,6.12198227436143,5.77838282058432,6.6639050133202,10.7311615351635,11.5945795480671,6.0229671388697,5.439770669662,9.71465744948071,3.89865850468601,5.82434953226536,8.00533194750986,12.1005529030421,6.49465011507172,7.77347063922748,9.01397886570755,8.98285341900225,28.028576367731,14.2213340630666,12.9894624606728,15.454951793981,13.6491600153991,6.16592950482924,41.6889992671946,13.6566767939639,14.7462527751215,10.3518262626128,14.7593918243877,16.4287678202359,17.52071736322,13.6976584549346,7.91023896749996,10.1219549843938,14.153768831198,11.3236794963186,17.4464799583711,13.5765070877862,20.5030937339934,8.49064311333487,7.74952815209784,11.240110429178,17.8524535513821,15.5974710058286,15.2484272487678,4.79330046095433,5.03250663100489,7.03664371832041,8.34356736922927,8.69432554923124,3.94797284663164,5.84068547043927,15.6832620329487,16.7949410323626,14.1524744722858,9.6803253707778,14.8337304977482,10.3455946995063,13.6847218652065,14.6183673300644,16.0566137997134,17.4234659587396,12.5560310910037,7.76110112217047,12.0718076042392,17.3977593754394,16.1875034230833,11.1789823538063,20.8535436919198,12.537077994798,16.2567887762275,19.1072896145753,24.5774615559632,16.9849618695712,16.4814829649444,10.7705401718461,17.3549284386011,10.0834754418168,12.5474709860161,17.7087808572663,14.9639099500757,10.6965614585188,13.9502168727802,10.8591768401468,14.8103864922132,12.9692296622485,8.91756905004413,7.89479932096795,8.34290438105992,9.5286557319864,8.20130799400096,9.46722433889417,3.96502539580558,9.25576983322405,18.9826542976358,14.8631469990681,16.2373001265838,16.5380490191141,14.6769508937614,12.7451169495415,11.8632265386128,12.0230236948528,16.8394589896181,12.3353012665514,16.3769833180061,10.7858329038507,16.2103537406021,12.3467589417708,5.12103332573321,14.9665551518745,23.6686244913469,12.8300336542548,12.8008641530633,13.3959415990508,14.4811670014549,10.9231509504906,11.6179058602617,9.00799296629144,7.70776830426587,18.1861165230543,15.3316016188298,16.1900720917095,12.1716072833102,16.8824011826692,11.4581633301639,10.64475708568,12.9708181420028,14.0026320725922,27.3159592401974,14.1413560114031,17.1620720213008,16.6702059445094,12.9166137735777,4.82443521363367,9.60716588866344,14.0223644710159,18.903937267275,20.1996652072474,21.1221223459652,16.7506257441816,12.3782693260727,13.6593553500459,16.2364198429377,15.9454576547118,15.3076577911188,13.2729284919748,15.0235934223329,12.0058718622655,10.5553898757491,12.5098307278303,12.2941068254759,12.417153583713,5.77982123956051,4.80567915028033,10.1639666133539,8.07906967053994,16.7219356290616,14.8366722832723,12.0637102730367,12.1874086955802,15.3731085116852,15.5692091933858,17.0020494703456,10.5212108848072,13.8350722281283,8.35435422696698,17.1747503102005,11.7523298420388,18.2433394476005,15.8371318053634,7.96470830039777,8.74010290157933,14.8138542912728,8.86443874852721,6.79194353625777,9.22305443831782,14.2135561242522,13.8142817201452,17.4683715408513,16.4339114126624,6.32511651449993,9.28219889233682,5.10659408630682,12.6042765821917,5.82114077022395,10.7168517515796,11.1724347194632,8.20496560969525,9.70839221552514,4.26250928760439,11.0295702789944,9.74427525973573,11.9085334949679,22.2596441470998,18.2454802166373,17.792312853806,16.9508728484454,17.5630762727216,10.7847909553045,8.52956389248344,19.4792804109552,18.1620443807636,21.6677597022563,29.7622162067412,27.6122339996471,25.6231553991305,16.1479508494163,18.7534946113702,12.9907975376158,4.77335309007557,13.6024477239888,18.0954325742895,13.1766515802598,17.1452402731864,19.8709933009022,10.2496903252464,13.9684340175818,12.5642852152334,14.6464919819726,12.4267862617385,5.6369293868419,22.5769984526408,19.6895603643946,18.4728628926845,17.307416346016,14.8681390431885,16.3126561717598,29.0355778202009,26.843992172982,14.0118790079084,9.79302021276743,21.1727450820879,18.4479945914049,22.6991215334268,27.1534520023592,26.4959509587873,24.8351693476581,27.043976141993,24.811840565329,29.4822033848591,28.5775524956249,27.2230699869469,25.1441332308561,27.6127985507746,25.0116570668558,11.3365191807606,13.763129109192,15.7896387632677,13.5986539254904,14.8755987404787,11.8239959534245,15.5678880627175,16.0776284309299,13.0408747049194,5.64751842617067,4.60325236507177,5.72895513439397,7.04598047609119,4.7955776383945,8.3093328712867,11.4753825039407,6.75481804836331,8.15656336171568,8.28416498802912,11.2090335390911,12.768795948833,12.9757540373142,15.3157231753025,12.157563432423,11.2144540154509,11.7790765734856,13.8043488350059,13.1576875932644,10.3605856823157,11.1530891951705,12.260712190095,14.8889996877113,12.8050304809739,12.6932386391905,10.9547548995107,12.6313915279892,14.4681915347779,13.1867488257058,12.5119082114238,13.3719008430312,10.4710725634009,12.3986818772607,10.0289027476307,11.0107975085937,13.7075664784516,10.7927503994936,11.3119975918272,11.4075455630524,11.2228454331548,11.8635018124174,13.0025916735744,10.2307760792422,11.6202630889474,14.2750892126045,8.24374907195222,10.9947855969342,10.3138105943183,11.2860115920618,10.3677966986172,8.81097775357602
|short_description=p1@Rad50
|short_description=p1@Rad50
}}
}}

Latest revision as of 16:35, 1 October 2015

Short description:p1@Rad50
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rad50_5end
Coexpression cluster:MCL_coexpression_mm9:364
Association with transcript: 0bp_to_ENSMUST00000020649, ENSMUST00000102756, ENSMUST00000108933, ENSMUST00000124352, ENSMUST00000128483, NM_009012, uc007iwt.1, uc007iwu.1, uc011xur.1, uc011xus.1_5end
EntrezGene:Rad50
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rad50

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.93
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I211.20
Ileum epithelium, pool1.CNhs13199.10252-104B99.12
Ileum epithelium, pool2.CNhs13232.10253-104C116.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.10
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D96.66
Mouse Schwann, donor2.CNhs12573.11746-123F910.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.17
accessory axillary lymph node, adult.CNhs10475.1063-29H941.69
adrenal gland, adult.CNhs10508.49-24D713.66
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I114.76
adrenal gland, embryo E18.CNhs11026.1262-18F516.43
adrenal gland, neonate N00.CNhs11191.1311-23C117.52
adrenal gland, neonate N25.CNhs11223.1377-27I313.70
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F511.32
bone (os femoris), neonate N16.CNhs11225.1525-43A617.45
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.85
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.25
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.79
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C614.83
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D414.62
eyeball, neonate N00.CNhs11207.633-15C616.06
eyeball, neonate N01.CNhs11140.1532-43E717.42
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E212.07
forelimb, embryo E12.CNhs10600.359-14H217.40
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E720.85
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B516.26
gonad, embryo E13.CNhs11044.1564-45I619.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C824.58
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.48
heart, embryo E11.CNhs10586.331-24E910.77
heart, embryo E12.CNhs11015.353-12F517.35
heart, embryo E13.CNhs11013.376-3I910.08
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C817.71
heart, embryo E16.CNhs11021.457-17C614.96
heart, embryo E17.CNhs11025.479-18E510.70
heart, embryo E18.CNhs11030.1283-20G313.95
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I214.81
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G18.92
heart, neonate N20.CNhs11127.821-26I67.89
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G19.47
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A39.26
intestine, embryo E12.CNhs11019.1251-16I518.98
intestine, embryo E13.CNhs11010.381-16D514.86
intestine, embryo E15.CNhs10602.976-16D816.24
intestine, embryo E16.CNhs10585.463-22H416.54
intestine, embryo E17.CNhs10582.482-18D314.68
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E912.02
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A516.38
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E316.21
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F814.97
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G713.40
kidney, neonate N10.CNhs11206.758-6D514.48
kidney, neonate N20.CNhs11113.832-19I110.92
kidney, neonate N25.CNhs11122.1353-25F311.62
kidney, neonate N30.CNhs11203.1385-42H19.01
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F818.19
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E116.19
liver, embryo E15.CNhs10520.433-16D712.17
liver, embryo E16.CNhs10523.462-17F516.88
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F412.97
liver, neonate N03.CNhs11123.1345-25G214.00
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A316.67
liver, neonate N25.CNhs11198.1368-26H112.92
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B19.61
lung, embryo E12.CNhs10522.354-16G214.02
lung, embryo E14.CNhs10604.404-26F818.90
lung, embryo E15.CNhs11020.432-17C520.20
lung, embryo E16.CNhs10998.458-17B621.12
lung, embryo E17.CNhs10605.480-44A616.75
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E516.24
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E615.31
lung, neonate N20.CNhs11109.822-18A413.27
lung, neonate N25.CNhs11119.1359-25C715.02
lung, neonate N30.CNhs11133.1394-42H212.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H711.75
ovary, neonate N00.CNhs11217.1299-22I418.24
oviduct, adult pregnant day01.CNhs10500.988-6G615.84
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G914.21
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D817.47
pancreas, neonate N16.CNhs11136.787-43B616.43
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C75.82
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B911.17
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G39.74
prostate, adult.CNhs10470.859-1F811.91
skin, adult.CNhs10492.30-1C322.26
skin, neonate N00.CNhs11124.650-25G418.25
skin, neonate N03.CNhs11215.662-22H317.79
skin, neonate N06.CNhs11097.693-20I516.95
skin, neonate N10.CNhs11108.762-6C417.56
small intestine, neonate N16.CNhs11114.790-21I110.78
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G219.48
spleen, embryo E16.CNhs11035.461-43C118.16
spleen, embryo E18.CNhs11011.1271-21F221.67
spleen, neonate N10.CNhs11116.752-24D129.76
spleen, neonate N20.CNhs11112.824-19H127.61
spleen, neonate N25.CNhs11099.1354-25G325.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G818.10
stomach, embryo E16.CNhs11022.459-17D413.18
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C619.87
stomach, neonate N03.CNhs11193.1340-24B810.25
stomach, neonate N07.CNhs11210.718-18A913.97
stomach, neonate N25.CNhs11104.1355-25E412.56
stomach, neonate N30.CNhs11134.1386-42I114.65
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F522.58
testis, embryo E15.CNhs11034.443-27C519.69
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I517.31
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B716.31
testis, neonate N07.CNhs11222.726-26I429.04
testis, neonate N10.CNhs11204.763-44D926.84
testis, neonate N20.CNhs11110.839-18H314.01
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B521.17
thymus, embryo E14.CNhs11041.402-44I418.45
thymus, embryo E15.CNhs11005.430-45I222.70
thymus, embryo E16.CNhs11002.456-26C527.15
thymus, embryo E17.CNhs10581.478-18C126.50
thymus, embryo E18.CNhs10595.1273-19G424.84
thymus, neonate N02.CNhs11181.1541-43F827.04
thymus, neonate N03.CNhs11137.2104-43C724.81
thymus, neonate N06.CNhs11197.681-26C429.48
thymus, neonate N07.CNhs11211.713-19D328.58
thymus, neonate N10.CNhs11194.748-24E427.22
thymus, neonate N20.CNhs11186.820-7A225.14
thymus, neonate N25.CNhs11125.1362-25G727.61
thymus, neonate N30.CNhs11132.1393-42G225.01
tongue, adult.CNhs10499.32-1B411.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.60
urinary bladder, adult.CNhs10481.879-12E414.88
uterus, adult pregnant day19.CNhs10497.590-15F511.82
uterus, adult.CNhs10509.92-27E515.57
vagina, adult.CNhs10502.89-27D516.08
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I811.21
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H212.98
whole body, embryo E14.5.CNhs10578.420-27D215.32
whole body, embryo E14.CNhs10519.395-14B112.16
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C611.29
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.29e-1129
immune organ1.29e-1129
mesoderm4.13e-11120
mesoderm-derived structure4.13e-11120
presumptive mesoderm4.13e-11120
hemolymphoid system1.58e-1048
immune system1.58e-1048
hematopoietic system2.10e-1045
blood island2.10e-1045
mixed endoderm/mesoderm-derived structure3.69e-1035
primordium8.90e-10134
foregut1.22e-0980
respiratory tract2.33e-0941
subdivision of digestive tract2.86e-09114
respiratory system3.32e-0942
digestive system4.21e-09116
digestive tract4.21e-09116
primitive gut4.21e-09116
endoderm-derived structure9.59e-09118
endoderm9.59e-09118
presumptive endoderm9.59e-09118
thymus2.12e-0823
neck2.12e-0823
respiratory system epithelium2.12e-0823
hemolymphoid system gland2.12e-0823
pharyngeal epithelium2.12e-0823
thymic region2.12e-0823
pharyngeal gland2.12e-0823
entire pharyngeal arch endoderm2.12e-0823
thymus primordium2.12e-0823
early pharyngeal endoderm2.12e-0823
gland of gut3.81e-0824
pharynx5.30e-0824
upper respiratory tract5.30e-0824
chordate pharynx5.30e-0824
pharyngeal arch system5.30e-0824
pharyngeal region of foregut5.30e-0824
segment of respiratory tract5.71e-0827
lateral plate mesoderm6.18e-0887
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