FFCP PHASE1:Mm9::chr18:66098673..66098684,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19434 | |EntrezGene=19434 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |MCL_coexpression_id=133 | ||
|TSSclassifier=NA | |||
|UniProt=O35602 | |UniProt=O35602 | ||
|association_with_transcript=58bp_to_ENSMUST00000025396,NM_013833,uc008ffl.1_5end | |association_with_transcript=58bp_to_ENSMUST00000025396,NM_013833,uc008ffl.1_5end | ||
|cluster_id=chr18:66098673..66098684,- | |||
|description=CAGE_peak_2_at_Rax_5end | |description=CAGE_peak_2_at_Rax_5end | ||
|id=chr18:66098673..66098684,- | |id=chr18:66098673..66098684,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.85e-24!9;UBERON:0000019!4.85e-24!9;UBERON:0000047!4.85e-24!9;UBERON:0004088!4.85e-24!9;UBERON:0002104!4.85e-24!9;UBERON:0001456!4.85e-24!9;UBERON:0003072!4.85e-24!9;UBERON:0003071!4.85e-24!9;UBERON:0004128!4.85e-24!9;UBERON:0001444!2.51e-19!11;UBERON:0000020!1.47e-17!12;UBERON:0001032!1.47e-17!12;UBERON:0004456!1.47e-17!12;UBERON:0005085!4.59e-16!13;UBERON:0000007!5.74e-15!8;UBERON:0003296!5.74e-15!8;UBERON:0010133!5.74e-15!8;UBERON:0003056!4.79e-12!49;UBERON:0001894!9.24e-12!10;UBERON:0006222!9.24e-12!10;UBERON:0000033!1.76e-08!63;UBERON:0002346!4.36e-07!71;UBERON:0003075!4.36e-07!71;UBERON:0007284!4.36e-07!71 | |ontology_enrichment_uberon=UBERON:0000970!4.85e-24!9;UBERON:0000019!4.85e-24!9;UBERON:0000047!4.85e-24!9;UBERON:0004088!4.85e-24!9;UBERON:0002104!4.85e-24!9;UBERON:0001456!4.85e-24!9;UBERON:0003072!4.85e-24!9;UBERON:0003071!4.85e-24!9;UBERON:0004128!4.85e-24!9;UBERON:0001444!2.51e-19!11;UBERON:0000020!1.47e-17!12;UBERON:0001032!1.47e-17!12;UBERON:0004456!1.47e-17!12;UBERON:0005085!4.59e-16!13;UBERON:0000007!5.74e-15!8;UBERON:0003296!5.74e-15!8;UBERON:0010133!5.74e-15!8;UBERON:0003056!4.79e-12!49;UBERON:0001894!9.24e-12!10;UBERON:0006222!9.24e-12!10;UBERON:0000033!1.76e-08!63;UBERON:0002346!4.36e-07!71;UBERON:0003075!4.36e-07!71;UBERON:0007284!4.36e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.78e-57,9;UBERON:0000019,7.78e-57,9;UBERON:0000047,7.78e-57,9;UBERON:0010312,7.78e-57,9;UBERON:0004088,7.78e-57,9;UBERON:0002104,7.78e-57,9;UBERON:0001456,7.78e-57,9;UBERON:0003072,7.78e-57,9;UBERON:0004128,7.78e-57,9;UBERON:0003071,7.78e-57,9;UBERON:0001444,2.21e-46,11;UBERON:0000020,1.85e-42,12;UBERON:0001032,1.85e-42,12;UBERON:0004456,1.85e-42,12;UBERON:0000033,3.87e-39,13;UBERON:0005085,3.87e-39,13;UBERON:0003056,6.15e-24,49;UBERON:0002346,5.05e-18,64;UBERON:0003075,5.05e-18,64;UBERON:0007284,5.05e-18,64;UBERON:0010371,1.24e-15,73;UBERON:0007811,1.36e-13,36;UBERON:0000007,1.52e-12,8;UBERON:0003296,1.52e-12,8;UBERON:0010133,1.52e-12,8;UBERON:0010314,4.10e-12,92;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0000153,3.17e-11,43;UBERON:0001894,4.33e-10,10;UBERON:0006222,4.33e-10,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56274011167028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,9.62891277924007,9.88579049063934,11.5239763075424,6.93242162044289,10.3415478710018,11.0177799444971,13.493048336601,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96134406868882,4.01011919726539,1.50035924522115,1.59606210278046,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56274011167028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,9.62891277924007,9.88579049063934,11.5239763075424,6.93242162044289,10.3415478710018,11.0177799444971,13.493048336601,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96134406868882,4.01011919726539,1.50035924522115,1.59606210278046,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Rax | |short_description=p2@Rax | ||
}} | }} |
Latest revision as of 15:51, 1 October 2015
Short description: | p2@Rax |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rax_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 58bp_to_ENSMUST00000025396, NM_013833, uc008ffl.1_5end |
EntrezGene: | Rax |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 7.78e-57 | 9 |
camera-type eye | 7.78e-57 | 9 |
simple eye | 7.78e-57 | 9 |
immature eye | 7.78e-57 | 9 |
ocular region | 7.78e-57 | 9 |
visual system | 7.78e-57 | 9 |
face | 7.78e-57 | 9 |
optic cup | 7.78e-57 | 9 |
optic vesicle | 7.78e-57 | 9 |
eye primordium | 7.78e-57 | 9 |
subdivision of head | 2.21e-46 | 11 |
sense organ | 1.85e-42 | 12 |
sensory system | 1.85e-42 | 12 |
entire sense organ system | 1.85e-42 | 12 |
head | 3.87e-39 | 13 |
ectodermal placode | 3.87e-39 | 13 |
pre-chordal neural plate | 6.15e-24 | 49 |
neurectoderm | 5.05e-18 | 64 |
neural plate | 5.05e-18 | 64 |
presumptive neural plate | 5.05e-18 | 64 |
ecto-epithelium | 1.24e-15 | 73 |
craniocervical region | 1.36e-13 | 36 |
pituitary gland | 1.52e-12 | 8 |
gland of diencephalon | 1.52e-12 | 8 |
neuroendocrine gland | 1.52e-12 | 8 |
structure with developmental contribution from neural crest | 4.10e-12 | 92 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
anterior region of body | 3.17e-11 | 43 |
diencephalon | 4.33e-10 | 10 |
future diencephalon | 4.33e-10 | 10 |