Personal tools

FFCP PHASE1:Mm9::chr13:41923683..41923694,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=109254|HGNC=|MCL_coexpression_id=166|UniProt=D3Z6U0|association_with_transcript=127bp_to_ENSMUST00000137905_5end|description=CAGE_peak_4_at_9530008L14Rik_5end|id=chr13:41923683..41923694,-|ontology_enrichment_celltype=CL:0002563!1.56e-07!9;CL:0002251!1.56e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,4.69e-09,25;CL:0002563,6.22e-09,9;CL:0002251,6.22e-09,9;CL:0000223,1.09e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.40e-12!15;UBERON:0000160!5.04e-12!43;UBERON:0001242!4.63e-11!13;UBERON:0000060!4.63e-11!13;UBERON:0001262!4.63e-11!13;UBERON:0004786!4.63e-11!13;UBERON:0009854!2.88e-10!23;UBERON:0009856!2.88e-10!23;UBERON:0002365!1.32e-09!25;UBERON:0002330!1.32e-09!25;UBERON:0002107!1.69e-09!22;UBERON:0007499!1.69e-09!22;UBERON:0006925!1.69e-09!22;UBERON:0009497!1.69e-09!22;UBERON:0000015!1.69e-09!22;UBERON:0002423!1.69e-09!22;UBERON:0006235!1.69e-09!22;UBERON:0008835!1.69e-09!22;UBERON:0003894!1.69e-09!22;UBERON:0004161!1.69e-09!22;UBERON:0008836!1.69e-09!22;UBERON:0005409!8.15e-09!59;UBERON:0004119!1.77e-08!130;UBERON:0000925!1.77e-08!130;UBERON:0006595!1.77e-08!130;UBERON:0001007!2.49e-08!128;UBERON:0001555!2.49e-08!128;UBERON:0007026!2.49e-08!128;UBERON:0004923!8.22e-08!24;UBERON:0003350!1.56e-07!9;UBERON:0004808!1.56e-07!9;UBERON:0001277!1.56e-07!9;UBERON:0004921!1.82e-07!126;UBERON:0004185!1.82e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-28,31;UBERON:0005409,7.58e-18,47;UBERON:0001007,8.94e-17,116;UBERON:0001555,8.94e-17,116;UBERON:0007026,8.94e-17,116;UBERON:0000344,9.84e-17,15;UBERON:0004119,2.75e-16,118;UBERON:0000925,2.75e-16,118;UBERON:0006595,2.75e-16,118;UBERON:0009854,1.19e-15,23;UBERON:0009856,1.19e-15,23;UBERON:0004921,3.78e-15,114;UBERON:0002107,1.97e-14,22;UBERON:0007499,1.97e-14,22;UBERON:0006925,1.97e-14,22;UBERON:0009497,1.97e-14,22;UBERON:0000015,1.97e-14,22;UBERON:0002423,1.97e-14,22;UBERON:0006235,1.97e-14,22;UBERON:0008835,1.97e-14,22;UBERON:0003894,1.97e-14,22;UBERON:0004161,1.97e-14,22;UBERON:0008836,1.97e-14,22;UBERON:0001242,2.38e-14,13;UBERON:0001262,2.38e-14,13;UBERON:0004786,2.38e-14,13;UBERON:0002365,3.55e-12,25;UBERON:0002330,3.55e-12,25;UBERON:0003929,1.26e-09,55;UBERON:0004923,4.19e-09,24;UBERON:0003350,6.22e-09,9;UBERON:0004808,6.22e-09,9;UBERON:0001277,6.22e-09,9;UBERON:0000485,4.82e-07,11;UBERON:0000490,5.04e-07,66;UBERON:0002108,5.93e-07,4|phase1_expression=0,3.48975407639361,3.63999391511629,3.62957053568196,5.50985302940982,1.00727563147134,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,5.59973479776923,2.75291137280604,0.57423196411502,5.1691439539089,5.38678081714723,17.1021077510736,12.3494763582366,3.32595765982957,0,0,0,3.75507105676657,2.49351968037739,3.67504841272264,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3250865237766,7.47968467078526,17.810205324048,24.0417274455638,25.9855594516455,7.16266542671934,0,0,0,0,0,0,0,0,0,0,13.245330047411,0,0.890652834388949,0,0,0,0,0.352766121407114,1.25666591329675,0.741584903203122,8.38676270135488,0,0,0,0,5.59175283654366,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,9.46988351489133,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,6.08236303326152,0,0,0,1.00841762311671,1.11189021922435,2.28270751335071,4.2707615539006,3.78807595865225,1.75934646160189,4.17808591286417,3.50935356814416,8.98819408654222,3.8904848977445,5.37681437786791,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,1.255989822731,2.34454611451421,26.3842838107563,0,0,0,0,0.241177159752417,0,1.43848068725405,2.91843408195064,3.56929837144506,5.75072826109418,10.0478055870496,9.67316786655138,16.4176270665623,15.7869723899283,14.9557491622644,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.65954501176592,0.161464426695906,0,0,0.328281799490123,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.909188012978695,0,5.05498395837992,0.621339313086926,0,0,0,0,0,0,0,0.5208175393758,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11123363900808,0.824140228955577,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,0.187283014939765,0.384150914429216,0.402048282689293,0.476293691283074,1.0429589335037,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.726732083161643,0.752875043322645,0.25384382367503,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.394017929502254,1.63692417267876,0.619747364743864,0.578719832943424,0,0.935726433781634,0.859484216193193,0.382576664137687,0.882365676478062,1.85494268496337|short_description=p4@9530008L14Rik}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109254
|HGNC=
|MCL_coexpression_id=166
|TSSclassifier=NA
|UniProt=D3Z6U0
|association_with_transcript=127bp_to_ENSMUST00000137905_5end
|cluster_id=chr13:41923683..41923694,-
|description=CAGE_peak_4_at_9530008L14Rik_5end
|id=chr13:41923683..41923694,-
|ontology_enrichment_celltype=CL:0002563!1.56e-07!9;CL:0002251!1.56e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000066,4.69e-09,25;CL:0002563,6.22e-09,9;CL:0002251,6.22e-09,9;CL:0000223,1.09e-08,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.40e-12!15;UBERON:0000160!5.04e-12!43;UBERON:0001242!4.63e-11!13;UBERON:0000060!4.63e-11!13;UBERON:0001262!4.63e-11!13;UBERON:0004786!4.63e-11!13;UBERON:0009854!2.88e-10!23;UBERON:0009856!2.88e-10!23;UBERON:0002365!1.32e-09!25;UBERON:0002330!1.32e-09!25;UBERON:0002107!1.69e-09!22;UBERON:0007499!1.69e-09!22;UBERON:0006925!1.69e-09!22;UBERON:0009497!1.69e-09!22;UBERON:0000015!1.69e-09!22;UBERON:0002423!1.69e-09!22;UBERON:0006235!1.69e-09!22;UBERON:0008835!1.69e-09!22;UBERON:0003894!1.69e-09!22;UBERON:0004161!1.69e-09!22;UBERON:0008836!1.69e-09!22;UBERON:0005409!8.15e-09!59;UBERON:0004119!1.77e-08!130;UBERON:0000925!1.77e-08!130;UBERON:0006595!1.77e-08!130;UBERON:0001007!2.49e-08!128;UBERON:0001555!2.49e-08!128;UBERON:0007026!2.49e-08!128;UBERON:0004923!8.22e-08!24;UBERON:0003350!1.56e-07!9;UBERON:0004808!1.56e-07!9;UBERON:0001277!1.56e-07!9;UBERON:0004921!1.82e-07!126;UBERON:0004185!1.82e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-28,31;UBERON:0005409,7.58e-18,47;UBERON:0001007,8.94e-17,116;UBERON:0001555,8.94e-17,116;UBERON:0007026,8.94e-17,116;UBERON:0000344,9.84e-17,15;UBERON:0004119,2.75e-16,118;UBERON:0000925,2.75e-16,118;UBERON:0006595,2.75e-16,118;UBERON:0009854,1.19e-15,23;UBERON:0009856,1.19e-15,23;UBERON:0004921,3.78e-15,114;UBERON:0002107,1.97e-14,22;UBERON:0007499,1.97e-14,22;UBERON:0006925,1.97e-14,22;UBERON:0009497,1.97e-14,22;UBERON:0000015,1.97e-14,22;UBERON:0002423,1.97e-14,22;UBERON:0006235,1.97e-14,22;UBERON:0008835,1.97e-14,22;UBERON:0003894,1.97e-14,22;UBERON:0004161,1.97e-14,22;UBERON:0008836,1.97e-14,22;UBERON:0001242,2.38e-14,13;UBERON:0001262,2.38e-14,13;UBERON:0004786,2.38e-14,13;UBERON:0002365,3.55e-12,25;UBERON:0002330,3.55e-12,25;UBERON:0003929,1.26e-09,55;UBERON:0004923,4.19e-09,24;UBERON:0003350,6.22e-09,9;UBERON:0004808,6.22e-09,9;UBERON:0001277,6.22e-09,9;UBERON:0000485,4.82e-07,11;UBERON:0000490,5.04e-07,66;UBERON:0002108,5.93e-07,4
|phase1_expression=0,3.48975407639361,3.63999391511629,3.62957053568196,5.50985302940982,1.00727563147134,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,5.59973479776923,2.75291137280604,0.57423196411502,5.1691439539089,5.38678081714723,17.1021077510736,12.3494763582366,3.32595765982957,0,0,0,3.75507105676657,2.49351968037739,3.67504841272264,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3250865237766,7.47968467078526,17.810205324048,24.0417274455638,25.9855594516455,7.16266542671934,0,0,0,0,0,0,0,0,0,0,13.245330047411,0,0.890652834388949,0,0,0,0,0.352766121407114,1.25666591329675,0.741584903203122,8.38676270135488,0,0,0,0,5.59175283654366,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,9.46988351489133,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,6.08236303326152,0,0,0,1.00841762311671,1.11189021922435,2.28270751335071,4.2707615539006,3.78807595865225,1.75934646160189,4.17808591286417,3.50935356814416,8.98819408654222,3.8904848977445,5.37681437786791,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,1.255989822731,2.34454611451421,26.3842838107563,0,0,0,0,0.241177159752417,0,1.43848068725405,2.91843408195064,3.56929837144506,5.75072826109418,10.0478055870496,9.67316786655138,16.4176270665623,15.7869723899283,14.9557491622644,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.65954501176592,0.161464426695906,0,0,0.328281799490123,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.909188012978695,0,5.05498395837992,0.621339313086926,0,0,0,0,0,0,0,0.5208175393758,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11123363900808,0.824140228955577,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,0.187283014939765,0.384150914429216,0.402048282689293,0.476293691283074,1.0429589335037,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.726732083161643,0.752875043322645,0.25384382367503,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.394017929502254,1.63692417267876,0.619747364743864,0.578719832943424,0,0.935726433781634,0.859484216193193,0.382576664137687,0.882365676478062,1.85494268496337
|short_description=p4@9530008L14Rik
}}

Latest revision as of 14:48, 1 October 2015

Short description:p4@9530008L14Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_9530008L14Rik_5end
Coexpression cluster:MCL_coexpression_mm9:166
Association with transcript: 127bp_to_ENSMUST00000137905_5end
EntrezGene:9530008L14Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@9530008L14Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B917.10
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.25
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H18.39
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B226.38
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H115.79
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.69e-0925
intestinal epithelial cell6.22e-099
epithelial cell of alimentary canal6.22e-099
endodermal cell1.09e-0820

Uber anatomy
Ontology termp-valuen
intestine1.20e-2831
gastrointestinal system7.58e-1847
digestive system8.94e-17116
digestive tract8.94e-17116
primitive gut8.94e-17116
mucosa9.84e-1715
endoderm-derived structure2.75e-16118
endoderm2.75e-16118
presumptive endoderm2.75e-16118
digestive tract diverticulum1.19e-1523
sac1.19e-1523
subdivision of digestive tract3.78e-15114
liver1.97e-1422
epithelial sac1.97e-1422
digestive gland1.97e-1422
epithelium of foregut-midgut junction1.97e-1422
anatomical boundary1.97e-1422
hepatobiliary system1.97e-1422
foregut-midgut junction1.97e-1422
hepatic diverticulum1.97e-1422
liver primordium1.97e-1422
septum transversum1.97e-1422
liver bud1.97e-1422
intestinal mucosa2.38e-1413
wall of intestine2.38e-1413
gastrointestinal system mucosa2.38e-1413
exocrine gland3.55e-1225
exocrine system3.55e-1225
gut epithelium1.26e-0955
organ component layer4.19e-0924
epithelium of mucosa6.22e-099
gastrointestinal system epithelium6.22e-099
intestinal epithelium6.22e-099
simple columnar epithelium4.82e-0711
unilaminar epithelium5.04e-0766
small intestine5.93e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:41923683..41923694,-&oldid=4308088"