FFCP PHASE1:Mm9::chr6:54276949..54276972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78004 | |EntrezGene=78004 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D1T5,A2RT92 | |UniProt=Q9D1T5,A2RT92 | ||
|association_with_transcript=-33bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end | |association_with_transcript=-33bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end | ||
|cluster_id=chr6:54276949..54276972,+ | |||
|description=CAGE_peak_3_at_Prr15_5end | |description=CAGE_peak_3_at_Prr15_5end | ||
|id=chr6:54276949..54276972,+ | |id=chr6:54276949..54276972,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.12e-07!9;CL:0002251!6.12e-07!9 | |ontology_enrichment_celltype=CL:0002563!6.12e-07!9;CL:0002251!6.12e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.69e-12,9;CL:0002251,2.69e-12,9;CL:0000075,1.08e-10,7;CL:0000239,6.50e-10,6;CL:0000677,6.50e-10,6;CL:0000584,6.50e-10,6;CL:0000066,2.69e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.47e-11!15;UBERON:0000160!6.31e-11!43;UBERON:0001242!7.92e-10!13;UBERON:0000060!7.92e-10!13;UBERON:0001262!7.92e-10!13;UBERON:0004786!7.92e-10!13;UBERON:0005409!1.30e-09!59;UBERON:0004923!3.75e-08!24;UBERON:0000485!1.27e-07!11;UBERON:0003103!4.99e-07!43;UBERON:0003350!6.12e-07!9;UBERON:0004808!6.12e-07!9;UBERON:0001277!6.12e-07!9;UBERON:0001008!8.36e-07!17;UBERON:0006554!9.53e-07!16 | |ontology_enrichment_uberon=UBERON:0000344!3.47e-11!15;UBERON:0000160!6.31e-11!43;UBERON:0001242!7.92e-10!13;UBERON:0000060!7.92e-10!13;UBERON:0001262!7.92e-10!13;UBERON:0004786!7.92e-10!13;UBERON:0005409!1.30e-09!59;UBERON:0004923!3.75e-08!24;UBERON:0000485!1.27e-07!11;UBERON:0003103!4.99e-07!43;UBERON:0003350!6.12e-07!9;UBERON:0004808!6.12e-07!9;UBERON:0001277!6.12e-07!9;UBERON:0001008!8.36e-07!17;UBERON:0006554!9.53e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-27,31;UBERON:0000344,9.44e-21,15;UBERON:0005409,4.09e-18,47;UBERON:0001242,4.87e-18,13;UBERON:0001262,4.87e-18,13;UBERON:0004786,4.87e-18,13;UBERON:0004923,8.39e-13,24;UBERON:0003350,2.69e-12,9;UBERON:0004808,2.69e-12,9;UBERON:0001277,2.69e-12,9;UBERON:0000485,1.10e-11,11;UBERON:0002113,2.97e-08,14;UBERON:0003918,2.97e-08,14;UBERON:0011143,2.97e-08,14;UBERON:0005095,2.97e-08,14;UBERON:0007687,2.97e-08,14;UBERON:0006554,2.45e-07,18;UBERON:0002108,3.48e-07,4;UBERON:0001008,8.20e-07,19 | |||
|phase1_expression=0.960893082628764,80.264343757053,75.0748744992734,37.5055622020469,42.0752413154932,10.9121526742728,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,21.7589694999033,25.2350209173887,55.1262685550419,35.7532456812032,36.1991670912294,59.0972834509323,56.7067791959844,27.4945833212578,0,0,0,1.73310971850765,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0.506719730950197,0.505524445014783,3.76806803072898,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,34.7421595083684,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.509196819251581,1.49288364732112,6.82351447770922,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.621377317606506,0.703578179943289,1.2604344302271,2.13070262026689,1.18058539048442,1.07986979021165,1.39520366850245,1.07309360559848,1.63471479314037,1.6455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.939444931322602,0,0,31.3897843834608,7.93351699990633,0,0.464473343720877,0.515469845288373,0.80673409849337,1.55664630691409,3.04361001780095,26.0990983849481,9.55253937399263,3.77002813200404,5.37182474511107,2.72949721966768,17.0775687644302,20.1008386383466,20.7106924184542,0.189667900953082,0.114248512609729,2.25415471346161,1.01825663922657,1.55161989734101,2.17421041659988,1.3279672796094,1.47610147979602,1.41298855057237,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.936113019343682,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,1.27746076687442,0.178065603667255,0,3.46437258242324,0,0,0.302323556964751,0,0.295301892880773,0,2.84271122485043,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.857348140126369,0.532020700926821,0.713475270408282,0,1.2178597964584,0.704015124191131,0.21183207086382,15.6575162619023,0,0,0.0603129249281559,0.238744688006273,0,20.1121777274597,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,1.57053565190418,10.3691978633434,2.4853572523477,1.69107881605257,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,0.911430693907651,1.99232754408851,1.69108884578204,1.44015003128933,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0.233753804363138,0.226730383615211,0,0,0,0.965947970160952,9.19644129710792,1.83151624267265,0.428736758158132,2.50786052017682,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0,0.798049746802062,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,0,1.2673964994512,0.565879024158229,0.187283014939765,0.384150914429216,0.287177344778066,0.952587382566147,0.231768651889711,0.964546102318525,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.676916863133412,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843 | |phase1_expression=0.960893082628764,80.264343757053,75.0748744992734,37.5055622020469,42.0752413154932,10.9121526742728,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,21.7589694999033,25.2350209173887,55.1262685550419,35.7532456812032,36.1991670912294,59.0972834509323,56.7067791959844,27.4945833212578,0,0,0,1.73310971850765,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0.506719730950197,0.505524445014783,3.76806803072898,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,34.7421595083684,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.509196819251581,1.49288364732112,6.82351447770922,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.621377317606506,0.703578179943289,1.2604344302271,2.13070262026689,1.18058539048442,1.07986979021165,1.39520366850245,1.07309360559848,1.63471479314037,1.6455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.939444931322602,0,0,31.3897843834608,7.93351699990633,0,0.464473343720877,0.515469845288373,0.80673409849337,1.55664630691409,3.04361001780095,26.0990983849481,9.55253937399263,3.77002813200404,5.37182474511107,2.72949721966768,17.0775687644302,20.1008386383466,20.7106924184542,0.189667900953082,0.114248512609729,2.25415471346161,1.01825663922657,1.55161989734101,2.17421041659988,1.3279672796094,1.47610147979602,1.41298855057237,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.936113019343682,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,1.27746076687442,0.178065603667255,0,3.46437258242324,0,0,0.302323556964751,0,0.295301892880773,0,2.84271122485043,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.857348140126369,0.532020700926821,0.713475270408282,0,1.2178597964584,0.704015124191131,0.21183207086382,15.6575162619023,0,0,0.0603129249281559,0.238744688006273,0,20.1121777274597,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,1.57053565190418,10.3691978633434,2.4853572523477,1.69107881605257,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,0.911430693907651,1.99232754408851,1.69108884578204,1.44015003128933,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0.233753804363138,0.226730383615211,0,0,0,0.965947970160952,9.19644129710792,1.83151624267265,0.428736758158132,2.50786052017682,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0,0.798049746802062,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,0,1.2673964994512,0.565879024158229,0.187283014939765,0.384150914429216,0.287177344778066,0.952587382566147,0.231768651889711,0.964546102318525,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.676916863133412,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Prr15 | |short_description=p3@Prr15 | ||
}} | }} |
Latest revision as of 13:50, 1 October 2015
Short description: | p3@Prr15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prr15_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -33bp_to_ENSMUST00000059138, NM_030024, uc009bzu.1_5end |
EntrezGene: | Prr15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.69e-12 | 9 |
epithelial cell of alimentary canal | 2.69e-12 | 9 |
columnar/cuboidal epithelial cell | 1.08e-10 | 7 |
brush border epithelial cell | 6.50e-10 | 6 |
gut absorptive cell | 6.50e-10 | 6 |
enterocyte | 6.50e-10 | 6 |
epithelial cell | 2.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.28e-27 | 31 |
mucosa | 9.44e-21 | 15 |
gastrointestinal system | 4.09e-18 | 47 |
intestinal mucosa | 4.87e-18 | 13 |
wall of intestine | 4.87e-18 | 13 |
gastrointestinal system mucosa | 4.87e-18 | 13 |
organ component layer | 8.39e-13 | 24 |
epithelium of mucosa | 2.69e-12 | 9 |
gastrointestinal system epithelium | 2.69e-12 | 9 |
intestinal epithelium | 2.69e-12 | 9 |
simple columnar epithelium | 1.10e-11 | 11 |
kidney | 2.97e-08 | 14 |
kidney mesenchyme | 2.97e-08 | 14 |
upper urinary tract | 2.97e-08 | 14 |
kidney rudiment | 2.97e-08 | 14 |
kidney field | 2.97e-08 | 14 |
urinary system structure | 2.45e-07 | 18 |
small intestine | 3.48e-07 | 4 |
renal system | 8.20e-07 | 19 |