FFCP PHASE1:Mm9::chr11:21472040..21472052,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17449 | |EntrezGene=17449 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=P14152 | |UniProt=P14152 | ||
|association_with_transcript=-103bp_to_NM_008618,uc007idv.2_5end | |association_with_transcript=-103bp_to_NM_008618,uc007idv.2_5end | ||
|cluster_id=chr11:21472040..21472052,- | |||
|description=CAGE_peak_8_at_Mdh1_5end | |description=CAGE_peak_8_at_Mdh1_5end | ||
|id=chr11:21472040..21472052,- | |id=chr11:21472040..21472052,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.00e-11,6;CL:0000677,2.00e-11,6;CL:0000584,2.00e-11,6;CL:0000075,8.24e-10,7;CL:0002563,1.19e-07,9;CL:0002251,1.19e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.03e-07!18;UBERON:0000948!3.03e-07!18;UBERON:0005498!3.03e-07!18;UBERON:0004140!3.03e-07!18;UBERON:0009881!3.03e-07!18;UBERON:0004141!3.03e-07!18;UBERON:0003084!3.03e-07!18;UBERON:0007005!3.03e-07!18;UBERON:0004139!3.03e-07!18;UBERON:0004291!3.03e-07!18 | |ontology_enrichment_uberon=UBERON:0007100!3.03e-07!18;UBERON:0000948!3.03e-07!18;UBERON:0005498!3.03e-07!18;UBERON:0004140!3.03e-07!18;UBERON:0009881!3.03e-07!18;UBERON:0004141!3.03e-07!18;UBERON:0003084!3.03e-07!18;UBERON:0007005!3.03e-07!18;UBERON:0004139!3.03e-07!18;UBERON:0004291!3.03e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.06e-17,31;UBERON:0000344,6.73e-17,15;UBERON:0001242,2.42e-15,13;UBERON:0001262,2.42e-15,13;UBERON:0004786,2.42e-15,13;UBERON:0005409,5.82e-11,47;UBERON:0004923,3.78e-10,24;UBERON:0001155,2.95e-09,2;UBERON:0000059,2.95e-09,2;UBERON:0003350,1.19e-07,9;UBERON:0004808,1.19e-07,9;UBERON:0001277,1.19e-07,9 | |||
|phase1_expression=0.320297694209588,3.83872948403297,2.27499619694768,3.0246421130683,1.50268718983904,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0.47997726838022,1.14704640533585,5.16808767703518,0.86152399231815,1.29282739611533,2.28028103347649,4.28451220591882,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.558365998002762,0.56276261003168,0,0,0,0,0.075726193333184,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,1.1418387971906,0,0.29688427812965,0.173485326766136,0.913396434936424,1.15307748628029,1.65794904607885,0.823120949949934,1.25666591329675,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,2.55457055208591,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0.420883711772948,0.130120442962704,0,0,0,0.272145996605311,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,0.617068451549513,1.16266972375204,0.536546802799238,0.233530684734339,0.822799249567402,0.492502392237286,0.324275238183423,0.438599962275997,0.439100230582101,0.402619256281115,0,0,6.60837565967596,2.3800550999719,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,2.80979464837102,3.38540164532424,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,0.642202359951168,0.468846746368813,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0.920650473014354,0,0,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0,0,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.701794825336225,0.214871054048298,0.382576664137687,0,0 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|phase1_expression=0.320297694209588,3.83872948403297,2.27499619694768,3.0246421130683,1.50268718983904,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0.47997726838022,1.14704640533585,5.16808767703518,0.86152399231815,1.29282739611533,2.28028103347649,4.28451220591882,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.558365998002762,0.56276261003168,0,0,0,0,0.075726193333184,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,1.1418387971906,0,0.29688427812965,0.173485326766136,0.913396434936424,1.15307748628029,1.65794904607885,0.823120949949934,1.25666591329675,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,2.55457055208591,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0.420883711772948,0.130120442962704,0,0,0,0.272145996605311,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,0.617068451549513,1.16266972375204,0.536546802799238,0.233530684734339,0.822799249567402,0.492502392237286,0.324275238183423,0.438599962275997,0.439100230582101,0.402619256281115,0,0,6.60837565967596,2.3800550999719,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,2.80979464837102,3.38540164532424,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,0.642202359951168,0.468846746368813,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0.920650473014354,0,0,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0,0,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.701794825336225,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p8@Mdh1 | |short_description=p8@Mdh1 | ||
}} | }} |
Latest revision as of 05:11, 27 September 2015
Short description: | p8@Mdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Mdh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -103bp_to_NM_008618, uc007idv.2_5end |
EntrezGene: | Mdh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.00e-11 | 6 |
gut absorptive cell | 2.00e-11 | 6 |
enterocyte | 2.00e-11 | 6 |
columnar/cuboidal epithelial cell | 8.24e-10 | 7 |
intestinal epithelial cell | 1.19e-07 | 9 |
epithelial cell of alimentary canal | 1.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.06e-17 | 31 |
mucosa | 6.73e-17 | 15 |
intestinal mucosa | 2.42e-15 | 13 |
wall of intestine | 2.42e-15 | 13 |
gastrointestinal system mucosa | 2.42e-15 | 13 |
gastrointestinal system | 5.82e-11 | 47 |
organ component layer | 3.78e-10 | 24 |
colon | 2.95e-09 | 2 |
large intestine | 2.95e-09 | 2 |
epithelium of mucosa | 1.19e-07 | 9 |
gastrointestinal system epithelium | 1.19e-07 | 9 |
intestinal epithelium | 1.19e-07 | 9 |