FFCP PHASE1:Mm9::chr4:61811844..61811860,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=381531|HGNC=|MCL_coexpression_id=73|UniProt=Q80YX8,Q3KQQ2|association_with_transcript=14bp_to_NM_001009550,uc008tbv.2_5end|description=CAGE_peak_1_at_Mup21_5end|id=chr4:61811844..61811860,-|ontology_enrichment_celltype=CL:0000181!2.68e-16!5;CL:0000417!2.68e-16!5;CL:0000668!2.68e-16!5;CL:0000412!2.68e-16!5;CL:0000182!2.68e-16!5;CL:0000414!5.09e-11!11|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-26,5;CL:0000057,3.04e-09,1;CL:0000632,3.04e-09,1;CL:0000223,7.27e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.01e-13!22;UBERON:0007499!3.01e-13!22;UBERON:0006925!3.01e-13!22;UBERON:0009497!3.01e-13!22;UBERON:0000015!3.01e-13!22;UBERON:0002423!3.01e-13!22;UBERON:0006235!3.01e-13!22;UBERON:0008835!3.01e-13!22;UBERON:0003894!3.01e-13!22;UBERON:0004161!3.01e-13!22;UBERON:0008836!3.01e-13!22;UBERON:0009854!1.25e-12!23;UBERON:0009856!1.25e-12!23;UBERON:0002365!1.55e-11!25;UBERON:0002330!1.55e-11!25;UBERON:0005256!8.97e-09!47;UBERON:0003914!4.46e-07!47;UBERON:0005172!9.28e-07!49;UBERON:0005173!9.28e-07!49;UBERON:0002417!9.28e-07!49;UBERON:0000916!9.28e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.65e-23,22;UBERON:0007499,9.65e-23,22;UBERON:0006925,9.65e-23,22;UBERON:0009497,9.65e-23,22;UBERON:0000015,9.65e-23,22;UBERON:0002423,9.65e-23,22;UBERON:0006235,9.65e-23,22;UBERON:0008835,9.65e-23,22;UBERON:0003894,9.65e-23,22;UBERON:0004161,9.65e-23,22;UBERON:0008836,9.65e-23,22;UBERON:0009854,9.76e-22,23;UBERON:0009856,9.76e-22,23;UBERON:0002365,5.74e-20,25;UBERON:0002330,5.74e-20,25;UBERON:0005256,6.95e-11,45;UBERON:0003914,2.13e-10,47;UBERON:0005172,5.95e-10,49;UBERON:0005173,5.95e-10,49;UBERON:0002417,5.95e-10,49;UBERON:0000916,5.95e-10,49;UBERON:0003929,8.37e-09,55;UBERON:0002368,5.08e-08,60;UBERON:0003104,7.03e-08,61;UBERON:0009142,7.03e-08,61;UBERON:0001041,1.99e-07,80;UBERON:0002530,2.34e-07,65;UBERON:0000490,3.10e-07,66;UBERON:0009569,3.10e-07,66;UBERON:0005911,6.81e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.0900952656784,277.428304152762,1888.42146754072,146.849470343173,71.2362750484764,170.499526039947,0,0,0,0,0,0,0,0,0,0,187.718298258135,0,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2297261001831,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51156378930677,4.82443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.849229592366497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Mup21}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381531 | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=Q80YX8,Q3KQQ2 | |||
|association_with_transcript=14bp_to_NM_001009550,uc008tbv.2_5end | |||
|cluster_id=chr4:61811844..61811860,- | |||
|description=CAGE_peak_1_at_Mup21_5end | |||
|id=chr4:61811844..61811860,- | |||
|ontology_enrichment_celltype=CL:0000181!2.68e-16!5;CL:0000417!2.68e-16!5;CL:0000668!2.68e-16!5;CL:0000412!2.68e-16!5;CL:0000182!2.68e-16!5;CL:0000414!5.09e-11!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-26,5;CL:0000057,3.04e-09,1;CL:0000632,3.04e-09,1;CL:0000223,7.27e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.01e-13!22;UBERON:0007499!3.01e-13!22;UBERON:0006925!3.01e-13!22;UBERON:0009497!3.01e-13!22;UBERON:0000015!3.01e-13!22;UBERON:0002423!3.01e-13!22;UBERON:0006235!3.01e-13!22;UBERON:0008835!3.01e-13!22;UBERON:0003894!3.01e-13!22;UBERON:0004161!3.01e-13!22;UBERON:0008836!3.01e-13!22;UBERON:0009854!1.25e-12!23;UBERON:0009856!1.25e-12!23;UBERON:0002365!1.55e-11!25;UBERON:0002330!1.55e-11!25;UBERON:0005256!8.97e-09!47;UBERON:0003914!4.46e-07!47;UBERON:0005172!9.28e-07!49;UBERON:0005173!9.28e-07!49;UBERON:0002417!9.28e-07!49;UBERON:0000916!9.28e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.65e-23,22;UBERON:0007499,9.65e-23,22;UBERON:0006925,9.65e-23,22;UBERON:0009497,9.65e-23,22;UBERON:0000015,9.65e-23,22;UBERON:0002423,9.65e-23,22;UBERON:0006235,9.65e-23,22;UBERON:0008835,9.65e-23,22;UBERON:0003894,9.65e-23,22;UBERON:0004161,9.65e-23,22;UBERON:0008836,9.65e-23,22;UBERON:0009854,9.76e-22,23;UBERON:0009856,9.76e-22,23;UBERON:0002365,5.74e-20,25;UBERON:0002330,5.74e-20,25;UBERON:0005256,6.95e-11,45;UBERON:0003914,2.13e-10,47;UBERON:0005172,5.95e-10,49;UBERON:0005173,5.95e-10,49;UBERON:0002417,5.95e-10,49;UBERON:0000916,5.95e-10,49;UBERON:0003929,8.37e-09,55;UBERON:0002368,5.08e-08,60;UBERON:0003104,7.03e-08,61;UBERON:0009142,7.03e-08,61;UBERON:0001041,1.99e-07,80;UBERON:0002530,2.34e-07,65;UBERON:0000490,3.10e-07,66;UBERON:0009569,3.10e-07,66;UBERON:0005911,6.81e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.0900952656784,277.428304152762,1888.42146754072,146.849470343173,71.2362750484764,170.499526039947,0,0,0,0,0,0,0,0,0,0,187.718298258135,0,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2297261001831,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51156378930677,4.82443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.849229592366497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Mup21 | |||
}} |
Latest revision as of 03:44, 27 September 2015
Short description: | p1@Mup21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mup21_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | 14bp_to_NM_001009550, uc008tbv.2_5end |
EntrezGene: | Mup21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.57e-26 | 5 |
fibroblast | 3.04e-09 | 1 |
hepatic stellate cell | 3.04e-09 | 1 |
endodermal cell | 7.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 9.65e-23 | 22 |
epithelial sac | 9.65e-23 | 22 |
digestive gland | 9.65e-23 | 22 |
epithelium of foregut-midgut junction | 9.65e-23 | 22 |
anatomical boundary | 9.65e-23 | 22 |
hepatobiliary system | 9.65e-23 | 22 |
foregut-midgut junction | 9.65e-23 | 22 |
hepatic diverticulum | 9.65e-23 | 22 |
liver primordium | 9.65e-23 | 22 |
septum transversum | 9.65e-23 | 22 |
liver bud | 9.65e-23 | 22 |
digestive tract diverticulum | 9.76e-22 | 23 |
sac | 9.76e-22 | 23 |
exocrine gland | 5.74e-20 | 25 |
exocrine system | 5.74e-20 | 25 |
trunk mesenchyme | 6.95e-11 | 45 |
epithelial tube | 2.13e-10 | 47 |
abdomen element | 5.95e-10 | 49 |
abdominal segment element | 5.95e-10 | 49 |
abdominal segment of trunk | 5.95e-10 | 49 |
abdomen | 5.95e-10 | 49 |
gut epithelium | 8.37e-09 | 55 |
endocrine gland | 5.08e-08 | 60 |
mesenchyme | 7.03e-08 | 61 |
entire embryonic mesenchyme | 7.03e-08 | 61 |
foregut | 1.99e-07 | 80 |
gland | 2.34e-07 | 65 |
unilaminar epithelium | 3.10e-07 | 66 |
subdivision of trunk | 3.10e-07 | 66 |
endo-epithelium | 6.81e-07 | 69 |