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FFCP PHASE1:Mm9::chr13:109106589..109106601,+: Difference between revisions

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(Created page with "{{FFCP |id=chr13:109106589..109106601,+ |short_description=p3@Depdc1b |description=CAGE_peak_3_at_Depdc1b_5end |association_with_transcript=-14bp_to_ENSMUST00000171178_5en...")
 
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{{FFCP
{{FFCP
|id=chr13:109106589..109106601,+
|DHSsupport=NA
|short_description=p3@Depdc1b
|DPIdataset=NA
|description=CAGE_peak_3_at_Depdc1b_5end
|association_with_transcript=-14bp_to_ENSMUST00000171178_5end
|EntrezGene=218581
|EntrezGene=218581
|HGNC=
|HGNC=
|MCL_coexpression_id=1634
|TSSclassifier=NA
|UniProt=E9PW09
|UniProt=E9PW09
|association_with_transcript=-14bp_to_ENSMUST00000171178_5end
|cluster_id=chr13:109106589..109106601,+
|description=CAGE_peak_3_at_Depdc1b_5end
|id=chr13:109106589..109106601,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.69e-15,29;UBERON:0005057,6.69e-15,29;UBERON:0002390,1.93e-12,45;UBERON:0003061,1.93e-12,45;UBERON:0007811,2.09e-12,36;UBERON:0000077,2.16e-11,35;UBERON:0002193,3.01e-11,48;UBERON:0002405,3.01e-11,48;UBERON:0001048,1.75e-10,134;UBERON:0000153,1.97e-10,43;UBERON:0002370,9.10e-10,23;UBERON:0000974,9.10e-10,23;UBERON:0004807,9.10e-10,23;UBERON:0005058,9.10e-10,23;UBERON:0003351,9.10e-10,23;UBERON:0009113,9.10e-10,23;UBERON:0003295,9.10e-10,23;UBERON:0009722,9.10e-10,23;UBERON:0005562,9.10e-10,23;UBERON:0007690,9.10e-10,23;UBERON:0006562,3.32e-09,24;UBERON:0003408,3.32e-09,24;UBERON:0001557,3.32e-09,24;UBERON:0001042,3.32e-09,24;UBERON:0008814,3.32e-09,24;UBERON:0009145,3.32e-09,24;UBERON:0001041,4.81e-09,80;UBERON:0000072,8.84e-08,27;UBERON:0003929,1.63e-07,55;UBERON:0000490,1.86e-07,66;UBERON:0003081,2.98e-07,87;UBERON:0002106,4.67e-07,6;UBERON:0004457,4.67e-07,6;UBERON:0000042,4.67e-07,6;UBERON:0004854,4.67e-07,6;UBERON:0009034,4.67e-07,6;UBERON:0002095,4.67e-07,6;UBERON:0004782,4.67e-07,6;UBERON:0003281,4.67e-07,6;UBERON:0009664,4.67e-07,6;UBERON:0002296,4.67e-07,6;UBERON:0005602,4.67e-07,6;UBERON:0001179,4.67e-07,6;UBERON:0006293,4.67e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,1.99865857089398,3.23960427823721,7.69518065940961,0,0.274228867211478,0.42438965179803,0.595303031057488,0.397163804803541,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,1.27006134691926,1.23012957516914,0,1.44425809875637,0.332469290716985,0.204169356262369,1.67412652294763,1.5626706890476,1.0470474879476,2.35292595212406,1.36609096991689,2.91306211818692,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0.672187598284928,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.270011876663381,0.841299845405528,1.14260393761521,0,0.244981598429908,0.766763768145891,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,7.11066703153331,0.432982082022428,0.253359865475099,0,0.22836775943812,0.776813650941515,0.148442139064825,0.520455980298408,0.304465478312141,0,0.904335843315735,0.23517741427141,0,0,0,3.5384422077995,0.808834249737046,2.65009822152472,2.42437626567611,0,0,0.209446706813455,0,0.838705871541442,0,0.635351135365324,0,0,0.251308704225729,0,0,0,0.324482526135515,0.305518091550949,1.49288364732112,0,0,1.30120442962704,1.37941262660084,1.44049703844279,1.05493372485001,1.97305847538851,2.17793324484245,1.03071897015702,0,0.431135985865684,0.756424320671277,0.351902248327898,0,0.278047249225598,0.696504333044333,1.02891068203972,0.796137067273973,0,1.02939162845886,0.284163499395593,0.414251545071004,1.40715635988658,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.492502392237286,0,0,0,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,0,0.407302655690628,0.581857461502877,0.420814919341911,0.632365371242573,0.147610147979602,0,0.123397163921801,0,0.500535317148282,1.17935397067922,1.79889689907883,1.62288097110802,2.17059443777175,2.03700681425136,2.01387296215567,2.91843408195064,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.37898282354097,0.488894929326078,1.18821560042632,0.469380496577004,0.837531287209079,0.238043640886014,0,0.788175720530955,1.7717175171902,0.318909537314974,0.327726629431476,0,0.578596234326046,0,0,0,0,0.160550589987792,0.468846746368813,0.163934945376675,0,0.94652465824877,0.390438744296638,0.430846795465598,0.477937595905104,0.891194696329576,0.849229592366497,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0.534196811001766,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.72375509913787,0.238744688006273,0.328281799490123,0.582961673259701,0.741701208042039,1.70870880797853,0.206386867963223,2.22233432843654,3.76736914009382,4.64760374251486,2.97411625168479,0.679913719975421,0.419854356970974,0.552799895217695,0.954670618015114,1.26534397432454,0.609958401380546,0.540026704109006,0.209088296014469,0.655087691238533,1.07891477107857,0.578574190077352,0.26175594198403,0.129614973291793,0,1.69107881605257,0.448549638131936,0,0.194451188344048,0.516639293910924,0.168956125490778,0.469428954583016,0.2604087696879,0.419437377702843,2.17425708743405,2.88030006257865,1.58005560314089,1.01362607645082,0.616265742988964,2.07873316764472,2.8644271306797,1.58945083825012,2.40390899039938,1.62458479892035,2.52416124870369,3.50551310612999,2.41982844328417,1.46186821109629,1.73181314952593,1.63627663054197,0,1.10992976687032,0.62799699626633,0.671538465456314,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0.830298780673413,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.576226371643824,0.459483751644906,1.42888107384922,0.463537303779422,0.192909220463705,1.64834360321323,0,0,0.70990322463735,0.238436189947321,0.872078499793971,0.282328141245992,0.761531471025089,0.548783918618318,0.263069711437843,0.679020569229309,0,0.474540072496697,0.394017929502254,1.22769312950907,0.77468420592983,0.385813221962283,0.499621155875892,0.467863216890817,1.07435527024149,0.191288332068843,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,1.99865857089398,3.23960427823721,7.69518065940961,0,0.274228867211478,0.42438965179803,0.595303031057488,0.397163804803541,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,1.27006134691926,1.23012957516914,0,1.44425809875637,0.332469290716985,0.204169356262369,1.67412652294763,1.5626706890476,1.0470474879476,2.35292595212406,1.36609096991689,2.91306211818692,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0.672187598284928,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.270011876663381,0.841299845405528,1.14260393761521,0,0.244981598429908,0.766763768145891,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,7.11066703153331,0.432982082022428,0.253359865475099,0,0.22836775943812,0.776813650941515,0.148442139064825,0.520455980298408,0.304465478312141,0,0.904335843315735,0.23517741427141,0,0,0,3.5384422077995,0.808834249737046,2.65009822152472,2.42437626567611,0,0,0.209446706813455,0,0.838705871541442,0,0.635351135365324,0,0,0.251308704225729,0,0,0,0.324482526135515,0.305518091550949,1.49288364732112,0,0,1.30120442962704,1.37941262660084,1.44049703844279,1.05493372485001,1.97305847538851,2.17793324484245,1.03071897015702,0,0.431135985865684,0.756424320671277,0.351902248327898,0,0.278047249225598,0.696504333044333,1.02891068203972,0.796137067273973,0,1.02939162845886,0.284163499395593,0.414251545071004,1.40715635988658,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.492502392237286,0,0,0,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,0,0.407302655690628,0.581857461502877,0.420814919341911,0.632365371242573,0.147610147979602,0,0.123397163921801,0,0.500535317148282,1.17935397067922,1.79889689907883,1.62288097110802,2.17059443777175,2.03700681425136,2.01387296215567,2.91843408195064,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.37898282354097,0.488894929326078,1.18821560042632,0.469380496577004,0.837531287209079,0.238043640886014,0,0.788175720530955,1.7717175171902,0.318909537314974,0.327726629431476,0,0.578596234326046,0,0,0,0,0.160550589987792,0.468846746368813,0.163934945376675,0,0.94652465824877,0.390438744296638,0.430846795465598,0.477937595905104,0.891194696329576,0.849229592366497,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0.534196811001766,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.72375509913787,0.238744688006273,0.328281799490123,0.582961673259701,0.741701208042039,1.70870880797853,0.206386867963223,2.22233432843654,3.76736914009382,4.64760374251486,2.97411625168479,0.679913719975421,0.419854356970974,0.552799895217695,0.954670618015114,1.26534397432454,0.609958401380546,0.540026704109006,0.209088296014469,0.655087691238533,1.07891477107857,0.578574190077352,0.26175594198403,0.129614973291793,0,1.69107881605257,0.448549638131936,0,0.194451188344048,0.516639293910924,0.168956125490778,0.469428954583016,0.2604087696879,0.419437377702843,2.17425708743405,2.88030006257865,1.58005560314089,1.01362607645082,0.616265742988964,2.07873316764472,2.8644271306797,1.58945083825012,2.40390899039938,1.62458479892035,2.52416124870369,3.50551310612999,2.41982844328417,1.46186821109629,1.73181314952593,1.63627663054197,0,1.10992976687032,0.62799699626633,0.671538465456314,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0.830298780673413,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.576226371643824,0.459483751644906,1.42888107384922,0.463537303779422,0.192909220463705,1.64834360321323,0,0,0.70990322463735,0.238436189947321,0.872078499793971,0.282328141245992,0.761531471025089,0.548783918618318,0.263069711437843,0.679020569229309,0,0.474540072496697,0.394017929502254,1.22769312950907,0.77468420592983,0.385813221962283,0.499621155875892,0.467863216890817,1.07435527024149,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p3@Depdc1b
}}
}}

Latest revision as of 02:15, 27 September 2015

Short description:p3@Depdc1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Depdc1b_5end
Coexpression cluster:MCL_coexpression_mm9:1634
Association with transcript: -14bp_to_ENSMUST00000171178_5end
EntrezGene:Depdc1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Depdc1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H14.65
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D33.51
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ6.69e-1529
immune organ6.69e-1529
hematopoietic system1.93e-1245
blood island1.93e-1245
craniocervical region2.09e-1236
mixed endoderm/mesoderm-derived structure2.16e-1135
hemolymphoid system3.01e-1148
immune system3.01e-1148
primordium1.75e-10134
anterior region of body1.97e-1043
thymus9.10e-1023
neck9.10e-1023
respiratory system epithelium9.10e-1023
hemolymphoid system gland9.10e-1023
pharyngeal epithelium9.10e-1023
thymic region9.10e-1023
pharyngeal gland9.10e-1023
entire pharyngeal arch endoderm9.10e-1023
thymus primordium9.10e-1023
early pharyngeal endoderm9.10e-1023
pharynx3.32e-0924
gland of gut3.32e-0924
upper respiratory tract3.32e-0924
chordate pharynx3.32e-0924
pharyngeal arch system3.32e-0924
pharyngeal region of foregut3.32e-0924
foregut4.81e-0980
segment of respiratory tract8.84e-0827
gut epithelium1.63e-0755
unilaminar epithelium1.86e-0766
lateral plate mesoderm2.98e-0787
spleen4.67e-076
cavity lining4.67e-076
serous membrane4.67e-076
gastrointestinal system mesentery4.67e-076
stomach region4.67e-076
mesentery4.67e-076
gastrointestinal system serosa4.67e-076
mesentery of stomach4.67e-076
gut mesentery4.67e-076
dorsal mesentery4.67e-076
dorsal mesogastrium4.67e-076
peritoneal cavity4.67e-076
spleen primordium4.67e-076
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