FFCP PHASE1:Mm9::chr18:20716778..20716781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13511 | |EntrezGene=13511 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VCE3 | |UniProt=Q8VCE3 | ||
|association_with_transcript=31bp_to_ENSMUST00000121837_5end | |association_with_transcript=31bp_to_ENSMUST00000121837_5end | ||
|cluster_id=chr18:20716778..20716781,+ | |||
|description=CAGE_peak_4_at_Dsg2_5end | |description=CAGE_peak_4_at_Dsg2_5end | ||
|id=chr18:20716778..20716781,+ | |id=chr18:20716778..20716781,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.63e-10!9;CL:0002251!3.63e-10!9;CL:0000239!3.04e-08!6;CL:0000677!3.04e-08!6;CL:0000212!3.04e-08!6;CL:0000584!3.04e-08!6;CL:0000066!5.03e-07!25;CL:0000075!6.96e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-17,6;CL:0000677,1.12e-17,6;CL:0000584,1.12e-17,6;CL:0000075,4.45e-15,7;CL:0002563,1.32e-11,9;CL:0002251,1.32e-11,9;CL:0000066,1.62e-10,25;CL:0000682,4.11e-10,3;CL:0002076,9.83e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.35e-17!15;UBERON:0001242!3.21e-15!13;UBERON:0000060!3.21e-15!13;UBERON:0001262!3.21e-15!13;UBERON:0004786!3.21e-15!13;UBERON:0005409!1.33e-14!59;UBERON:0004923!6.54e-14!24;UBERON:0000160!6.23e-13!43;UBERON:0003350!3.63e-10!9;UBERON:0004808!3.63e-10!9;UBERON:0001277!3.63e-10!9;UBERON:0004119!9.01e-10!130;UBERON:0000925!9.01e-10!130;UBERON:0006595!9.01e-10!130;UBERON:0001007!1.08e-08!128;UBERON:0001555!1.08e-08!128;UBERON:0007026!1.08e-08!128;UBERON:0000485!6.67e-08!11;UBERON:0004921!1.41e-07!126;UBERON:0004185!1.41e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-29,31;UBERON:0005409,2.65e-28,47;UBERON:0000344,4.74e-28,15;UBERON:0001242,1.33e-22,13;UBERON:0001262,1.33e-22,13;UBERON:0004786,1.33e-22,13;UBERON:0004923,1.83e-19,24;UBERON:0002108,1.82e-13,4;UBERON:0004119,3.02e-13,118;UBERON:0000925,3.02e-13,118;UBERON:0006595,3.02e-13,118;UBERON:0001007,2.52e-12,116;UBERON:0001555,2.52e-12,116;UBERON:0007026,2.52e-12,116;UBERON:0003350,1.32e-11,9;UBERON:0004808,1.32e-11,9;UBERON:0001277,1.32e-11,9;UBERON:0000331,6.66e-11,3;UBERON:0002116,6.66e-11,3;UBERON:0001204,6.66e-11,3;UBERON:0001168,6.66e-11,3;UBERON:0004921,3.72e-10,114;UBERON:0000485,2.16e-09,11;UBERON:0001155,3.22e-07,2;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2;UBERON:0000059,3.22e-07,2 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,3.0246421130683,2.00358291978539,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,2.2940928106717,2.29692785646008,3.01533397311352,1.939241094173,5.51067916423484,6.80481350351813,2.43903561720835,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0,0.150722640552623,0,0.251333182659351,0.741584903203122,0,0,0,0,0,11.1835056730873,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0,0,2.31293148088659,2.11560453330835,0,0,0,0,0,0.190225626112559,1.42358718463353,0,0.502670417600539,0.795825888164603,1.36474860983384,0.898819408654221,3.45820879799511,3.38540164532424,0,0,0,0,0,0,0,0.147610147979602,0,0,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.624075346229121,0.505157755894224,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,1.7488850197791,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.108005340821801,0,0.436725127492355,0.809186078308924,1.1571483801547,4.4498510137285,6.61036363788144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.269141569828427,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,1.39590163055744,1.81999695755814,3.0246421130683,2.00358291978539,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,2.2940928106717,2.29692785646008,3.01533397311352,1.939241094173,5.51067916423484,6.80481350351813,2.43903561720835,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0,0.150722640552623,0,0.251333182659351,0.741584903203122,0,0,0,0,0,11.1835056730873,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0,0,2.31293148088659,2.11560453330835,0,0,0,0,0,0.190225626112559,1.42358718463353,0,0.502670417600539,0.795825888164603,1.36474860983384,0.898819408654221,3.45820879799511,3.38540164532424,0,0,0,0,0,0,0,0.147610147979602,0,0,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.624075346229121,0.505157755894224,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,1.7488850197791,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.108005340821801,0,0.436725127492355,0.809186078308924,1.1571483801547,4.4498510137285,6.61036363788144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.269141569828427,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p4@Dsg2 | |short_description=p4@Dsg2 | ||
}} | }} |
Latest revision as of 02:12, 27 September 2015
Short description: | p4@Dsg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dsg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | 31bp_to_ENSMUST00000121837_5end |
EntrezGene: | Dsg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.12e-17 | 6 |
gut absorptive cell | 1.12e-17 | 6 |
enterocyte | 1.12e-17 | 6 |
columnar/cuboidal epithelial cell | 4.45e-15 | 7 |
intestinal epithelial cell | 1.32e-11 | 9 |
epithelial cell of alimentary canal | 1.32e-11 | 9 |
epithelial cell | 1.62e-10 | 25 |
M cell of gut | 4.11e-10 | 3 |
endo-epithelial cell | 9.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.51e-29 | 31 |
gastrointestinal system | 2.65e-28 | 47 |
mucosa | 4.74e-28 | 15 |
intestinal mucosa | 1.33e-22 | 13 |
wall of intestine | 1.33e-22 | 13 |
gastrointestinal system mucosa | 1.33e-22 | 13 |
organ component layer | 1.83e-19 | 24 |
small intestine | 1.82e-13 | 4 |
endoderm-derived structure | 3.02e-13 | 118 |
endoderm | 3.02e-13 | 118 |
presumptive endoderm | 3.02e-13 | 118 |
digestive system | 2.52e-12 | 116 |
digestive tract | 2.52e-12 | 116 |
primitive gut | 2.52e-12 | 116 |
epithelium of mucosa | 1.32e-11 | 9 |
gastrointestinal system epithelium | 1.32e-11 | 9 |
intestinal epithelium | 1.32e-11 | 9 |
ileal mucosa | 6.66e-11 | 3 |
ileum | 6.66e-11 | 3 |
mucosa of small intestine | 6.66e-11 | 3 |
wall of small intestine | 6.66e-11 | 3 |
subdivision of digestive tract | 3.72e-10 | 114 |
simple columnar epithelium | 2.16e-09 | 11 |
colon | 3.22e-07 | 2 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |
large intestine | 3.22e-07 | 2 |