FFCP PHASE1:Mm9::chr18:10182160..10182177,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:10182160..10182177,-
|short_description=p4@Rock1
|description=CAGE_peak_4_at_Rock1_5end
|association_with_transcript=-370bp_to_ENSMUST00000067947,NM_00907...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19877 | |EntrezGene=19877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=P70335,Q3UE22 | |UniProt=P70335,Q3UE22 | ||
|association_with_transcript=-370bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end | |||
|cluster_id=chr18:10182160..10182177,- | |||
|description=CAGE_peak_4_at_Rock1_5end | |||
|id=chr18:10182160..10182177,- | |||
|ontology_enrichment_celltype=CL:0000542!8.51e-07!13;CL:0000051!8.51e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.47e-07,13;CL:0000051,8.47e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!6.94e-09!51;UBERON:0004177!7.30e-09!29;UBERON:0005911!1.65e-08!69;UBERON:0002405!3.46e-08!70;UBERON:0002193!2.85e-07!48;UBERON:0003408!3.02e-07!24;UBERON:0002390!3.27e-07!45;UBERON:0003061!3.27e-07!45;UBERON:0002370!5.51e-07!23;UBERON:0000974!5.51e-07!23;UBERON:0004807!5.51e-07!23;UBERON:0005058!5.51e-07!23;UBERON:0003351!5.51e-07!23;UBERON:0009113!5.51e-07!23;UBERON:0003295!5.51e-07!23;UBERON:0009722!5.51e-07!23;UBERON:0005562!5.51e-07!23;UBERON:0007690!5.51e-07!23;UBERON:0003929!5.78e-07!55;UBERON:0001048!6.95e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.81e-09,29;UBERON:0005057,5.81e-09,29;UBERON:0005911,1.42e-08,69;UBERON:0000077,4.91e-08,35;UBERON:0003408,2.42e-07,24;UBERON:0002193,2.48e-07,48;UBERON:0002405,2.48e-07,48;UBERON:0002390,2.83e-07,45;UBERON:0003061,2.83e-07,45;UBERON:0002370,4.43e-07,23;UBERON:0000974,4.43e-07,23;UBERON:0004807,4.43e-07,23;UBERON:0005058,4.43e-07,23;UBERON:0003351,4.43e-07,23;UBERON:0009113,4.43e-07,23;UBERON:0003295,4.43e-07,23;UBERON:0009722,4.43e-07,23;UBERON:0005562,4.43e-07,23;UBERON:0007690,4.43e-07,23;UBERON:0003929,5.01e-07,55;UBERON:0001041,6.41e-07,80;UBERON:0001048,9.75e-07,134 | |||
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| ||
|short_description=p4@Rock1 | |||
}} | }} |
Latest revision as of 01:13, 27 September 2015
Short description: | p4@Rock1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rock1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -370bp_to_ENSMUST00000067947, NM_009071, uc008eaq.1, uc008ear.1_5end |
EntrezGene: | Rock1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.47e-07 | 13 |
common lymphoid progenitor | 8.47e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.81e-09 | 29 |
immune organ | 5.81e-09 | 29 |
endo-epithelium | 1.42e-08 | 69 |
mixed endoderm/mesoderm-derived structure | 4.91e-08 | 35 |
gland of gut | 2.42e-07 | 24 |
hemolymphoid system | 2.48e-07 | 48 |
immune system | 2.48e-07 | 48 |
hematopoietic system | 2.83e-07 | 45 |
blood island | 2.83e-07 | 45 |
thymus | 4.43e-07 | 23 |
neck | 4.43e-07 | 23 |
respiratory system epithelium | 4.43e-07 | 23 |
hemolymphoid system gland | 4.43e-07 | 23 |
pharyngeal epithelium | 4.43e-07 | 23 |
thymic region | 4.43e-07 | 23 |
pharyngeal gland | 4.43e-07 | 23 |
entire pharyngeal arch endoderm | 4.43e-07 | 23 |
thymus primordium | 4.43e-07 | 23 |
early pharyngeal endoderm | 4.43e-07 | 23 |
gut epithelium | 5.01e-07 | 55 |
foregut | 6.41e-07 | 80 |
primordium | 9.75e-07 | 134 |