FFCP PHASE1:Mm9::chr18:10182160..10182177,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19877 | |EntrezGene=19877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |MCL_coexpression_id=36 | ||
|TSSclassifier=NA | |||
|UniProt=P70335,Q3UE22 | |UniProt=P70335,Q3UE22 | ||
|association_with_transcript=-370bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end | |association_with_transcript=-370bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end | ||
|cluster_id=chr18:10182160..10182177,- | |||
|description=CAGE_peak_4_at_Rock1_5end | |description=CAGE_peak_4_at_Rock1_5end | ||
|id=chr18:10182160..10182177,- | |id=chr18:10182160..10182177,- | ||
|ontology_enrichment_celltype=CL:0000542!8.51e-07!13;CL:0000051!8.51e-07!13 | |ontology_enrichment_celltype=CL:0000542!8.51e-07!13;CL:0000051!8.51e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.47e-07,13;CL:0000051,8.47e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!6.94e-09!51;UBERON:0004177!7.30e-09!29;UBERON:0005911!1.65e-08!69;UBERON:0002405!3.46e-08!70;UBERON:0002193!2.85e-07!48;UBERON:0003408!3.02e-07!24;UBERON:0002390!3.27e-07!45;UBERON:0003061!3.27e-07!45;UBERON:0002370!5.51e-07!23;UBERON:0000974!5.51e-07!23;UBERON:0004807!5.51e-07!23;UBERON:0005058!5.51e-07!23;UBERON:0003351!5.51e-07!23;UBERON:0009113!5.51e-07!23;UBERON:0003295!5.51e-07!23;UBERON:0009722!5.51e-07!23;UBERON:0005562!5.51e-07!23;UBERON:0007690!5.51e-07!23;UBERON:0003929!5.78e-07!55;UBERON:0001048!6.95e-07!147 | |ontology_enrichment_uberon=UBERON:0005057!6.94e-09!51;UBERON:0004177!7.30e-09!29;UBERON:0005911!1.65e-08!69;UBERON:0002405!3.46e-08!70;UBERON:0002193!2.85e-07!48;UBERON:0003408!3.02e-07!24;UBERON:0002390!3.27e-07!45;UBERON:0003061!3.27e-07!45;UBERON:0002370!5.51e-07!23;UBERON:0000974!5.51e-07!23;UBERON:0004807!5.51e-07!23;UBERON:0005058!5.51e-07!23;UBERON:0003351!5.51e-07!23;UBERON:0009113!5.51e-07!23;UBERON:0003295!5.51e-07!23;UBERON:0009722!5.51e-07!23;UBERON:0005562!5.51e-07!23;UBERON:0007690!5.51e-07!23;UBERON:0003929!5.78e-07!55;UBERON:0001048!6.95e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.81e-09,29;UBERON:0005057,5.81e-09,29;UBERON:0005911,1.42e-08,69;UBERON:0000077,4.91e-08,35;UBERON:0003408,2.42e-07,24;UBERON:0002193,2.48e-07,48;UBERON:0002405,2.48e-07,48;UBERON:0002390,2.83e-07,45;UBERON:0003061,2.83e-07,45;UBERON:0002370,4.43e-07,23;UBERON:0000974,4.43e-07,23;UBERON:0004807,4.43e-07,23;UBERON:0005058,4.43e-07,23;UBERON:0003351,4.43e-07,23;UBERON:0009113,4.43e-07,23;UBERON:0003295,4.43e-07,23;UBERON:0009722,4.43e-07,23;UBERON:0005562,4.43e-07,23;UBERON:0007690,4.43e-07,23;UBERON:0003929,5.01e-07,55;UBERON:0001041,6.41e-07,80;UBERON:0001048,9.75e-07,134 | |||
|phase1_expression=3.04282809499109,6.2815573375085,3.18499467572675,4.83942738090928,5.00895729946347,3.52546471014969,2.33612640595526,18.0772652818207,12.3894075493467,11.9372908424217,3.76679530096111,4.3874687447435,14.5520620441525,14.4243663991346,8.99396356902289,8.70643649776252,6.29605690315332,16.7194947639866,17.0021897671116,11.4585205985468,4.33720779770456,6.35462087685666,4.96279599363977,3.03985603307473,2.98232065387321,5.7423196411502,3.01533397311352,4.30942465371778,2.09025761402011,2.01624103807945,1.55211357458713,0.635030673459631,0.61506478758457,0,3.46621943701529,2.32728503501889,2.04169356262369,18.8339233831608,12.5013655123808,9.94695113550217,22.9410280332096,24.589637458504,14.5653105909346,0.881277725829041,1.11514624341466,0.367093504323363,2.34717403304412,0.436050312760893,0.219686182734472,2.72201858703997,0.979904951377538,1.43752564364972,11.7447824240415,17.4086914082723,17.4768775554081,1.02903774414379,1.14613375975503,3.6097046459421,3.23706337375356,3.1739458756322,5.07065122804943,0.338844532069132,0.889294796111139,3.1496490104849,0.988866362566974,0,0.898800331555214,1.15265491596466,2.90330914463737,2.8351247049655,2.73422449756797,1.14260393761521,1.98781686856452,2.57230678351403,1.82106394934649,2.75765635983006,2.20231761998777,2.42605942361857,3.07213066512487,2.90149833006426,2.56165402086747,3.64639359389732,1.3959149950069,1.68828783009504,3.66715794664344,1.76777151284201,3.41692033917847,2.23679334990361,1.81742863999642,1.88928900266964,8.40607017234866,4.30211938490693,0,3.77792234146472,3.24888208723835,4.92829575807069,4.21333260395256,0.340860645156116,0.779358013808606,0.70667914902068,1.83096445709685,3.84979432242953,0,0,1.73192832808971,1.01343946190039,1.01104889002957,3.76806803072898,12.6879562987114,3.11728492036132,1.73485326766136,2.43572382649713,2.7673859670727,2.86373017049983,3.29248379979973,3.39299796590124,2.47194967734374,4.62717942143717,7.07688441559899,1.61766849947409,5.52103796150984,6.30337829075789,0,4.68449275218475,2.72280718857492,1.78819938646014,9.58520996047362,0.599902730993408,5.71816021828791,2.99581278809645,4.11750542536764,2.26177833803156,2.78118912307642,4.09144731728529,2.90903262383384,1.94689515681309,1.83310854930569,5.47390670684409,3.0326731012041,4.41927897361595,2.73252930221678,1.83921683546778,4.14142898552303,3.31550599238573,3.40182495756639,2.17793324484245,4.12287588062807,5.17406741478031,2.58681591519411,5.67318240503458,4.39877810409872,3.06874025398605,4.44875598760957,3.48252166522167,4.32142486456681,1.19420560091096,2.1066395619397,4.88961023517959,4.26245249093389,3.93538967817454,2.34526059981096,3.6012412292203,2.3674473558521,2.75469924446365,3.23960937063494,3.48800917125612,4.29237442239391,3.26942958628075,3.78487654801005,3.447516745661,4.86412857275134,5.70179950958796,5.26920276698522,2.68412837520744,4.20579897128254,3.08713837137853,3.30418782983798,1.32225283331772,4.90562976231038,1.16118335930219,2.96395161040815,4.43703754171354,2.44615848229357,3.23383564391351,3.32170343081158,2.63518327558417,2.26201687920243,2.18852119245266,4.28920991662064,4.49409704327111,2.16138049874694,2.58883655230677,0.379335801906163,3.19895835307241,1.1270773567308,2.44381593414377,4.65485969202302,2.45475369616115,3.98390183882821,4.57591458736767,1.8839847340965,3.33172342588861,3.26097889795864,6.17326891149548,4.32429789249047,6.07127703439105,5.88294352026658,6.27060615356284,6.3656462945355,4.31544206176216,3.24270453550071,2.74561413188081,10.0637744569148,2.60498663367952,3.12037673114561,2.52578877947112,5.02312757861354,0.964887042726734,7.02062122633098,3.03186258832776,2.77040459951444,1.86719594352707,3.98973422090454,5.69521275302174,7.14130922658041,4.29294025287157,4.88668946729192,3.32197034473162,5.10255259703959,5.24362607090362,5.00786447411097,4.33947175744535,0,3.80733978673097,3.93411418415229,4.13905119457099,2.88991061978026,3.04750385139728,0.655739781506702,1.51482556322624,1.26203287766503,1.95219372148319,2.58508077279359,2.38968797952552,2.22798674082394,3.39691836946599,2.02405350837447,1.46127928955656,1.97643888973262,4.81981974632711,2.98074178937364,2.13678724400706,2.11753047159649,4.78413356620353,3.98235415019888,3.39892890616974,1.209294227859,3.96070667487386,0.885905678642318,7.07100840271033,3.35956781118687,4.36240475373007,2.13898427030833,3.47640433729398,2.10837217149998,8.25084345985495,5.7874732978144,2.52085531643834,1.03486947026204,4.07240366560025,5.67488747655275,4.8159580752559,5.59466670047211,1.2178597964584,2.58138878870081,1.90648863777438,6.61585194164886,1.97863503529776,4.52100394748536,3.31721087104857,2.26807453605959,2.9545361954111,3.78925087618806,3.52308073819968,9.56876932467975,3.50857675537478,4.44466865687308,7.91147519419702,9.70529016819279,8.92234875505438,7.9889862097112,14.4149995893368,12.1615976947893,1.90934123603023,3.63786392618306,2.64315307264903,3.34816556547584,3.97267762427491,3.27543845619266,2.69728692769641,3.14083131756277,2.09404753587224,1.94422459937689,4.97071450469541,5.07323644815771,3.43888055901151,2.48187735685646,4.4723773319131,1.93739735216597,3.54807863530634,2.58185925020659,3.6457227756306,4.50895181030557,5.55643477899814,3.45636007509439,21.8047673233443,1.41907650703115,3.80030541509861,7.7952493786677,11.4577085227188,19.0734100590014,15.8657993366359,16.6889165707272,15.9526990918073,14.17446603783,16.7371467327155,20.466154955348,19.6272156946272,19.7521964686852,2.0405734525369,1.77588762699252,1.52513556236109,1.34307693091263,3.47741269257943,2.064507229963,4.39563898241436,2.57242054894879,3.00943262421218,3.95326289831947,1.84130094602871,2.86447756719698,2.40594455281163,0.685082519770642,3.0215755895588,0.675022500231806,2.70192721934532,2.26571204492102,1.03552062350364,2.90604573235695,3.19219898720825,2.90247129782028,3.40349403895612,1.67690530102386,3.8607136774503,3.77819437262746,4.53277125925567,4.81378814387723,5.30664144703975,2.78827229879264,4.90428487603798,3.27745276144588,3.71345883948242,3.38869266838118,0.476293691283074,2.78122382267653,5.59436739344745,1.64834360321323,5.2991611248383,3.42869252385415,3.90446773550542,2.86123427936785,3.34296758254356,4.6113596403512,2.70766745253365,3.29270351170991,3.6829759601298,2.71608227691724,3.92799590160417,4.50813068871862,3.34915240076916,2.86461730218783,2.94379998253335,2.70069255373598,2.74791635731741,2.8071793013449,3.65280791882107,3.63447830930802,3.08827986767322,3.47801753430632 | |phase1_expression=3.04282809499109,6.2815573375085,3.18499467572675,4.83942738090928,5.00895729946347,3.52546471014969,2.33612640595526,18.0772652818207,12.3894075493467,11.9372908424217,3.76679530096111,4.3874687447435,14.5520620441525,14.4243663991346,8.99396356902289,8.70643649776252,6.29605690315332,16.7194947639866,17.0021897671116,11.4585205985468,4.33720779770456,6.35462087685666,4.96279599363977,3.03985603307473,2.98232065387321,5.7423196411502,3.01533397311352,4.30942465371778,2.09025761402011,2.01624103807945,1.55211357458713,0.635030673459631,0.61506478758457,0,3.46621943701529,2.32728503501889,2.04169356262369,18.8339233831608,12.5013655123808,9.94695113550217,22.9410280332096,24.589637458504,14.5653105909346,0.881277725829041,1.11514624341466,0.367093504323363,2.34717403304412,0.436050312760893,0.219686182734472,2.72201858703997,0.979904951377538,1.43752564364972,11.7447824240415,17.4086914082723,17.4768775554081,1.02903774414379,1.14613375975503,3.6097046459421,3.23706337375356,3.1739458756322,5.07065122804943,0.338844532069132,0.889294796111139,3.1496490104849,0.988866362566974,0,0.898800331555214,1.15265491596466,2.90330914463737,2.8351247049655,2.73422449756797,1.14260393761521,1.98781686856452,2.57230678351403,1.82106394934649,2.75765635983006,2.20231761998777,2.42605942361857,3.07213066512487,2.90149833006426,2.56165402086747,3.64639359389732,1.3959149950069,1.68828783009504,3.66715794664344,1.76777151284201,3.41692033917847,2.23679334990361,1.81742863999642,1.88928900266964,8.40607017234866,4.30211938490693,0,3.77792234146472,3.24888208723835,4.92829575807069,4.21333260395256,0.340860645156116,0.779358013808606,0.70667914902068,1.83096445709685,3.84979432242953,0,0,1.73192832808971,1.01343946190039,1.01104889002957,3.76806803072898,12.6879562987114,3.11728492036132,1.73485326766136,2.43572382649713,2.7673859670727,2.86373017049983,3.29248379979973,3.39299796590124,2.47194967734374,4.62717942143717,7.07688441559899,1.61766849947409,5.52103796150984,6.30337829075789,0,4.68449275218475,2.72280718857492,1.78819938646014,9.58520996047362,0.599902730993408,5.71816021828791,2.99581278809645,4.11750542536764,2.26177833803156,2.78118912307642,4.09144731728529,2.90903262383384,1.94689515681309,1.83310854930569,5.47390670684409,3.0326731012041,4.41927897361595,2.73252930221678,1.83921683546778,4.14142898552303,3.31550599238573,3.40182495756639,2.17793324484245,4.12287588062807,5.17406741478031,2.58681591519411,5.67318240503458,4.39877810409872,3.06874025398605,4.44875598760957,3.48252166522167,4.32142486456681,1.19420560091096,2.1066395619397,4.88961023517959,4.26245249093389,3.93538967817454,2.34526059981096,3.6012412292203,2.3674473558521,2.75469924446365,3.23960937063494,3.48800917125612,4.29237442239391,3.26942958628075,3.78487654801005,3.447516745661,4.86412857275134,5.70179950958796,5.26920276698522,2.68412837520744,4.20579897128254,3.08713837137853,3.30418782983798,1.32225283331772,4.90562976231038,1.16118335930219,2.96395161040815,4.43703754171354,2.44615848229357,3.23383564391351,3.32170343081158,2.63518327558417,2.26201687920243,2.18852119245266,4.28920991662064,4.49409704327111,2.16138049874694,2.58883655230677,0.379335801906163,3.19895835307241,1.1270773567308,2.44381593414377,4.65485969202302,2.45475369616115,3.98390183882821,4.57591458736767,1.8839847340965,3.33172342588861,3.26097889795864,6.17326891149548,4.32429789249047,6.07127703439105,5.88294352026658,6.27060615356284,6.3656462945355,4.31544206176216,3.24270453550071,2.74561413188081,10.0637744569148,2.60498663367952,3.12037673114561,2.52578877947112,5.02312757861354,0.964887042726734,7.02062122633098,3.03186258832776,2.77040459951444,1.86719594352707,3.98973422090454,5.69521275302174,7.14130922658041,4.29294025287157,4.88668946729192,3.32197034473162,5.10255259703959,5.24362607090362,5.00786447411097,4.33947175744535,0,3.80733978673097,3.93411418415229,4.13905119457099,2.88991061978026,3.04750385139728,0.655739781506702,1.51482556322624,1.26203287766503,1.95219372148319,2.58508077279359,2.38968797952552,2.22798674082394,3.39691836946599,2.02405350837447,1.46127928955656,1.97643888973262,4.81981974632711,2.98074178937364,2.13678724400706,2.11753047159649,4.78413356620353,3.98235415019888,3.39892890616974,1.209294227859,3.96070667487386,0.885905678642318,7.07100840271033,3.35956781118687,4.36240475373007,2.13898427030833,3.47640433729398,2.10837217149998,8.25084345985495,5.7874732978144,2.52085531643834,1.03486947026204,4.07240366560025,5.67488747655275,4.8159580752559,5.59466670047211,1.2178597964584,2.58138878870081,1.90648863777438,6.61585194164886,1.97863503529776,4.52100394748536,3.31721087104857,2.26807453605959,2.9545361954111,3.78925087618806,3.52308073819968,9.56876932467975,3.50857675537478,4.44466865687308,7.91147519419702,9.70529016819279,8.92234875505438,7.9889862097112,14.4149995893368,12.1615976947893,1.90934123603023,3.63786392618306,2.64315307264903,3.34816556547584,3.97267762427491,3.27543845619266,2.69728692769641,3.14083131756277,2.09404753587224,1.94422459937689,4.97071450469541,5.07323644815771,3.43888055901151,2.48187735685646,4.4723773319131,1.93739735216597,3.54807863530634,2.58185925020659,3.6457227756306,4.50895181030557,5.55643477899814,3.45636007509439,21.8047673233443,1.41907650703115,3.80030541509861,7.7952493786677,11.4577085227188,19.0734100590014,15.8657993366359,16.6889165707272,15.9526990918073,14.17446603783,16.7371467327155,20.466154955348,19.6272156946272,19.7521964686852,2.0405734525369,1.77588762699252,1.52513556236109,1.34307693091263,3.47741269257943,2.064507229963,4.39563898241436,2.57242054894879,3.00943262421218,3.95326289831947,1.84130094602871,2.86447756719698,2.40594455281163,0.685082519770642,3.0215755895588,0.675022500231806,2.70192721934532,2.26571204492102,1.03552062350364,2.90604573235695,3.19219898720825,2.90247129782028,3.40349403895612,1.67690530102386,3.8607136774503,3.77819437262746,4.53277125925567,4.81378814387723,5.30664144703975,2.78827229879264,4.90428487603798,3.27745276144588,3.71345883948242,3.38869266838118,0.476293691283074,2.78122382267653,5.59436739344745,1.64834360321323,5.2991611248383,3.42869252385415,3.90446773550542,2.86123427936785,3.34296758254356,4.6113596403512,2.70766745253365,3.29270351170991,3.6829759601298,2.71608227691724,3.92799590160417,4.50813068871862,3.34915240076916,2.86461730218783,2.94379998253335,2.70069255373598,2.74791635731741,2.8071793013449,3.65280791882107,3.63447830930802,3.08827986767322,3.47801753430632 | ||
|short_description=p4@Rock1 | |short_description=p4@Rock1 | ||
}} | }} |
Latest revision as of 01:13, 27 September 2015
Short description: | p4@Rock1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rock1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -370bp_to_ENSMUST00000067947, NM_009071, uc008eaq.1, uc008ear.1_5end |
EntrezGene: | Rock1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.47e-07 | 13 |
common lymphoid progenitor | 8.47e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.81e-09 | 29 |
immune organ | 5.81e-09 | 29 |
endo-epithelium | 1.42e-08 | 69 |
mixed endoderm/mesoderm-derived structure | 4.91e-08 | 35 |
gland of gut | 2.42e-07 | 24 |
hemolymphoid system | 2.48e-07 | 48 |
immune system | 2.48e-07 | 48 |
hematopoietic system | 2.83e-07 | 45 |
blood island | 2.83e-07 | 45 |
thymus | 4.43e-07 | 23 |
neck | 4.43e-07 | 23 |
respiratory system epithelium | 4.43e-07 | 23 |
hemolymphoid system gland | 4.43e-07 | 23 |
pharyngeal epithelium | 4.43e-07 | 23 |
thymic region | 4.43e-07 | 23 |
pharyngeal gland | 4.43e-07 | 23 |
entire pharyngeal arch endoderm | 4.43e-07 | 23 |
thymus primordium | 4.43e-07 | 23 |
early pharyngeal endoderm | 4.43e-07 | 23 |
gut epithelium | 5.01e-07 | 55 |
foregut | 6.41e-07 | 80 |
primordium | 9.75e-07 | 134 |