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FFCP PHASE1:Mm9::chr4:155387967..155387981,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22163
|EntrezGene=22163
|HGNC=
|HGNC=
|MCL_coexpression_id=467
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=2bp_to_ENSMUST00000143576_5end
|association_with_transcript=2bp_to_ENSMUST00000143576_5end
|cluster_id=chr4:155387967..155387981,+
|description=CAGE_peak_2_at_Tnfrsf4_5end
|description=CAGE_peak_2_at_Tnfrsf4_5end
|id=chr4:155387967..155387981,+
|id=chr4:155387967..155387981,+
|ontology_enrichment_celltype=CL:0000624!1.31e-09!8;CL:0002031!3.87e-09!25;CL:0000791!3.11e-08!9;CL:0000789!3.11e-08!9;CL:0002420!3.11e-08!9;CL:0002419!3.11e-08!9;CL:0000790!3.11e-08!9;CL:0000893!1.73e-07!6;CL:0002489!1.73e-07!6;CL:0000898!1.73e-07!6;CL:0000809!1.73e-07!6;CL:0000810!1.73e-07!6;CL:0000895!1.73e-07!6;CL:0000808!1.73e-07!6;CL:0000894!1.73e-07!6;CL:0000806!1.73e-07!6;CL:0000807!1.73e-07!6;CL:0000805!1.73e-07!6;CL:0002425!1.73e-07!6;CL:0002436!1.73e-07!6;CL:0002427!1.73e-07!6;CL:0002428!1.73e-07!6;CL:0002429!1.73e-07!6;CL:0002433!1.73e-07!6;CL:0002431!1.73e-07!6;CL:0002432!1.73e-07!6;CL:0000050!8.51e-07!9
|ontology_enrichment_celltype=CL:0000624!1.31e-09!8;CL:0002031!3.87e-09!25;CL:0000791!3.11e-08!9;CL:0000789!3.11e-08!9;CL:0002420!3.11e-08!9;CL:0002419!3.11e-08!9;CL:0000790!3.11e-08!9;CL:0000893!1.73e-07!6;CL:0002489!1.73e-07!6;CL:0000898!1.73e-07!6;CL:0000809!1.73e-07!6;CL:0000810!1.73e-07!6;CL:0000895!1.73e-07!6;CL:0000808!1.73e-07!6;CL:0000894!1.73e-07!6;CL:0000806!1.73e-07!6;CL:0000807!1.73e-07!6;CL:0000805!1.73e-07!6;CL:0002425!1.73e-07!6;CL:0002436!1.73e-07!6;CL:0002427!1.73e-07!6;CL:0002428!1.73e-07!6;CL:0002429!1.73e-07!6;CL:0002433!1.73e-07!6;CL:0002431!1.73e-07!6;CL:0002432!1.73e-07!6;CL:0000050!8.51e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000624,3.98e-18,8;CL:0000791,6.27e-16,9;CL:0000789,6.27e-16,9;CL:0002420,6.27e-16,9;CL:0002419,6.27e-16,9;CL:0000790,6.27e-16,9;CL:0002031,1.25e-14,25;CL:0000893,9.00e-14,6;CL:0002489,9.00e-14,6;CL:0000898,9.00e-14,6;CL:0000809,9.00e-14,6;CL:0000810,9.00e-14,6;CL:0000895,9.00e-14,6;CL:0000808,9.00e-14,6;CL:0000894,9.00e-14,6;CL:0000806,9.00e-14,6;CL:0000807,9.00e-14,6;CL:0000805,9.00e-14,6;CL:0002425,9.00e-14,6;CL:0002436,9.00e-14,6;CL:0002427,9.00e-14,6;CL:0002428,9.00e-14,6;CL:0002429,9.00e-14,6;CL:0002433,9.00e-14,6;CL:0002431,9.00e-14,6;CL:0002432,9.00e-14,6;CL:0000084,9.83e-13,11;CL:0000827,9.83e-13,11;CL:0000838,1.55e-11,12;CL:0000988,1.12e-10,32;CL:0002032,1.12e-10,32;CL:0000037,1.12e-10,32;CL:0000837,1.12e-10,32;CL:0000542,1.59e-10,13;CL:0000051,1.59e-10,13;CL:0000050,6.76e-08,9;CL:0000764,7.83e-08,3;CL:0000765,7.83e-08,3;CL:0000038,7.83e-08,3;CL:0000547,7.83e-08,3;CL:0000738,1.13e-07,17;CL:0002087,1.13e-07,17;CL:0000682,1.30e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:2531,7.83e-08,3;DOID:0060083,7.83e-08,3;DOID:1240,7.83e-08,3
|ontology_enrichment_uberon=UBERON:0000065!1.83e-14!41;UBERON:0001004!7.22e-14!42;UBERON:0004177!3.21e-10!29;UBERON:0002193!4.22e-10!48;UBERON:0000072!4.85e-10!27;UBERON:0006562!1.99e-09!24;UBERON:0001557!1.99e-09!24;UBERON:0001042!1.99e-09!24;UBERON:0008814!1.99e-09!24;UBERON:0009145!1.99e-09!24;UBERON:0002370!4.98e-09!23;UBERON:0000974!4.98e-09!23;UBERON:0004807!4.98e-09!23;UBERON:0005058!4.98e-09!23;UBERON:0003351!4.98e-09!23;UBERON:0009113!4.98e-09!23;UBERON:0003295!4.98e-09!23;UBERON:0009722!4.98e-09!23;UBERON:0005562!4.98e-09!23;UBERON:0007690!4.98e-09!23;UBERON:0003408!2.02e-08!24;UBERON:0002390!4.27e-08!45;UBERON:0003061!4.27e-08!45
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.32e-18,23;UBERON:0000974,7.32e-18,23;UBERON:0004807,7.32e-18,23;UBERON:0005058,7.32e-18,23;UBERON:0003351,7.32e-18,23;UBERON:0009113,7.32e-18,23;UBERON:0003295,7.32e-18,23;UBERON:0009722,7.32e-18,23;UBERON:0005562,7.32e-18,23;UBERON:0007690,7.32e-18,23;UBERON:0002193,9.62e-18,48;UBERON:0002405,9.62e-18,48;UBERON:0004177,2.70e-17,29;UBERON:0005057,2.70e-17,29;UBERON:0006562,5.81e-17,24;UBERON:0003408,5.81e-17,24;UBERON:0001557,5.81e-17,24;UBERON:0001042,5.81e-17,24;UBERON:0008814,5.81e-17,24;UBERON:0009145,5.81e-17,24;UBERON:0000072,1.23e-16,27;UBERON:0000065,2.04e-15,41;UBERON:0001004,6.22e-15,42;UBERON:0002390,9.24e-14,45;UBERON:0003061,9.24e-14,45;UBERON:0000077,1.32e-13,35;UBERON:0005911,1.21e-10,69;UBERON:0007811,4.31e-10,36;UBERON:0003929,9.85e-10,55;UBERON:0001007,2.32e-08,116;UBERON:0001555,2.32e-08,116;UBERON:0007026,2.32e-08,116;UBERON:0000490,2.82e-08,66;UBERON:0004119,4.18e-08,118;UBERON:0000925,4.18e-08,118;UBERON:0006595,4.18e-08,118;UBERON:0000153,6.99e-08,43;UBERON:0002465,2.35e-07,3;UBERON:0001041,3.53e-07,80;UBERON:0004921,5.99e-07,114
|phase1_expression=0,10.8182376368202,9.09998478779072,0,0,5.70789524500425,8.87728034262997,194.847095073339,118.2625266074,143.481554635382,187.997329111604,173.663990132847,6.33442700745461,4.28359971853087,0.666219523631325,0.809901069559304,0,1.41957974411207,2.87940310572051,1.69755860719212,0.0850432901510698,0,0,8.31960598525715,6.65286915094793,9.76194338995534,14.6459078694085,19.39241094173,0,0,7.76056787293567,24.131165591466,16.6067492647834,79.2408405077194,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,66.7333170650437,0,0,1.43266719969378,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0,0.11418387971906,17.0899003207133,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,1.34005005953453,3.33261097240419,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,1.14704320301017,1.03610989119537,0.867894351489069,0,0,0,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2977250588296,0.645857706783622,0.603129249281559,0.596861720015682,0.328281799490123,0.874442509889552,0,1.87957968877638,0,0,0.376736914009382,2.05041341581538,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,4.4241556887945,0,0,0,0.537080087002444,0,5.7693815769585,4.13530676088816,4.54349024766664,3.58171991278499,5.44461399738939,7.21188317474168,4.04089734889384,6.19447581562315,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.338458431566706,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.467863216890817,0,0,0.441182838239031,0
|phase1_expression=0,10.8182376368202,9.09998478779072,0,0,5.70789524500425,8.87728034262997,194.847095073339,118.2625266074,143.481554635382,187.997329111604,173.663990132847,6.33442700745461,4.28359971853087,0.666219523631325,0.809901069559304,0,1.41957974411207,2.87940310572051,1.69755860719212,0.0850432901510698,0,0,8.31960598525715,6.65286915094793,9.76194338995534,14.6459078694085,19.39241094173,0,0,7.76056787293567,24.131165591466,16.6067492647834,79.2408405077194,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,66.7333170650437,0,0,1.43266719969378,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0,0.11418387971906,17.0899003207133,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,1.34005005953453,3.33261097240419,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,1.14704320301017,1.03610989119537,0.867894351489069,0,0,0,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2977250588296,0.645857706783622,0.603129249281559,0.596861720015682,0.328281799490123,0.874442509889552,0,1.87957968877638,0,0,0.376736914009382,2.05041341581538,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,4.4241556887945,0,0,0,0.537080087002444,0,5.7693815769585,4.13530676088816,4.54349024766664,3.58171991278499,5.44461399738939,7.21188317474168,4.04089734889384,6.19447581562315,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.338458431566706,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.467863216890817,0,0,0.441182838239031,0
|short_description=p2@Tnfrsf4
|short_description=p2@Tnfrsf4
}}
}}

Latest revision as of 20:31, 26 September 2015

Short description:p2@Tnfrsf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tnfrsf4_5end
Coexpression cluster:MCL_coexpression_mm9:467
Association with transcript: 2bp_to_ENSMUST00000143576_5end
EntrezGene:Tnfrsf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tnfrsf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9194.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7118.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2143.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6188.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1173.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I114.65
GP2+ M cell, pool3.CNhs13240.11847-124I219.39
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I966.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F85.77
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A27.21
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell3.98e-188
mature alpha-beta T cell6.27e-169
alpha-beta T cell6.27e-169
immature T cell6.27e-169
mature T cell6.27e-169
immature alpha-beta T cell6.27e-169
hematopoietic lineage restricted progenitor cell1.25e-1425
thymocyte9.00e-146
double negative thymocyte9.00e-146
naive T cell9.00e-146
double-positive, alpha-beta thymocyte9.00e-146
CD4-positive, alpha-beta thymocyte9.00e-146
naive thymus-derived CD4-positive, alpha-beta T cell9.00e-146
DN4 thymocyte9.00e-146
DN1 thymic pro-T cell9.00e-146
DN2 thymocyte9.00e-146
DN3 thymocyte9.00e-146
immature single positive thymocyte9.00e-146
early T lineage precursor9.00e-146
mature CD4 single-positive thymocyte9.00e-146
resting double-positive thymocyte9.00e-146
double-positive blast9.00e-146
CD69-positive double-positive thymocyte9.00e-146
CD69-positive, CD4-positive single-positive thymocyte9.00e-146
CD4-positive, CD8-intermediate double-positive thymocyte9.00e-146
CD24-positive, CD4 single-positive thymocyte9.00e-146
T cell9.83e-1311
pro-T cell9.83e-1311
lymphoid lineage restricted progenitor cell1.55e-1112
hematopoietic cell1.12e-1032
hematopoietic oligopotent progenitor cell1.12e-1032
hematopoietic stem cell1.12e-1032
hematopoietic multipotent progenitor cell1.12e-1032
lymphocyte1.59e-1013
common lymphoid progenitor1.59e-1013
megakaryocyte-erythroid progenitor cell6.76e-089
erythroid lineage cell7.83e-083
erythroblast7.83e-083
erythroid progenitor cell7.83e-083
proerythroblast7.83e-083
leukocyte1.13e-0717
nongranular leukocyte1.13e-0717
M cell of gut1.30e-073

Uber anatomy
Ontology termp-valuen
thymus7.32e-1823
neck7.32e-1823
respiratory system epithelium7.32e-1823
hemolymphoid system gland7.32e-1823
pharyngeal epithelium7.32e-1823
thymic region7.32e-1823
pharyngeal gland7.32e-1823
entire pharyngeal arch endoderm7.32e-1823
thymus primordium7.32e-1823
early pharyngeal endoderm7.32e-1823
hemolymphoid system9.62e-1848
immune system9.62e-1848
hemopoietic organ2.70e-1729
immune organ2.70e-1729
pharynx5.81e-1724
gland of gut5.81e-1724
upper respiratory tract5.81e-1724
chordate pharynx5.81e-1724
pharyngeal arch system5.81e-1724
pharyngeal region of foregut5.81e-1724
segment of respiratory tract1.23e-1627
respiratory tract2.04e-1541
respiratory system6.22e-1542
hematopoietic system9.24e-1445
blood island9.24e-1445
mixed endoderm/mesoderm-derived structure1.32e-1335
endo-epithelium1.21e-1069
craniocervical region4.31e-1036
gut epithelium9.85e-1055
digestive system2.32e-08116
digestive tract2.32e-08116
primitive gut2.32e-08116
unilaminar epithelium2.82e-0866
endoderm-derived structure4.18e-08118
endoderm4.18e-08118
presumptive endoderm4.18e-08118
anterior region of body6.99e-0843
lymphoid system2.35e-073
foregut3.53e-0780
subdivision of digestive tract5.99e-07114

Disease
Ontology termp-valuen
hematologic cancer7.83e-083
immune system cancer7.83e-083
leukemia7.83e-083
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